RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 TCRAP04437 139 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 TYMSP04818 313 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 STAG3L2P0CL84 134 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 STAG3L3P0CL85 134 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 INAFM2P0DMQ5 153 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 GCHFRP30047 84 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 RAB2AP61019 212 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 FLI1Q01543 452 aaPredicted RBP2.83□□□□□ -1.96
NIPBL-203ENST00000503274 LGALSLQ3ZCW2 172 aaPredicted RBP2.83□□□□□ -1.96
NIPBL-203ENST00000503274 RNASE13Q5GAN3 156 aaKnown RBP2.83□□□□□ -1.96
NIPBL-203ENST00000503274 LELP1Q5T871 98 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 CFAP126Q5VTH2 177 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 PRNTQ86SH4 94 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 SLC25A29Q8N8R3 303 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.83□□□□□ -1.96
NIPBL-203ENST00000503274 TMEM75Q8N9X5 138 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 ATP6V0E2Q8NHE4 81 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 TMEM70Q9BUB7 260 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 GTSF1LQ9H1H1 148 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 MED28Q9H204 178 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 BATF3Q9NR55 127 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 EPDR1Q9UM22 224 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 TNFSF18Q9UNG2 199 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 URGCP-MRPS24S4R325 110 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 MYCBP2O75592 4640 aa2.83□□□□□ -1.96
NIPBL-203ENST00000503274 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
NIPBL-203ENST00000503274 A0A1W2PRE2 83 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 GGTLC3B5MD39 225 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 C1QBP02746 253 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 ATP6V0CP27449 155 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 ASIPP42127 132 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 GNG5P63218 68 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 IFITM3Q01628 133 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 ELOBQ15370 118 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 AKR1C8PQ5T2L2 129 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 MRPL55Q7Z7F7 128 aaKnown RBP2.82□□□□□ -1.96
NIPBL-203ENST00000503274 LINC00304Q8N9R0 145 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 ST20-AS1Q8NBB2 130 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 STOML3Q8TAV4 291 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 SUN5Q8TC36 379 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 HIST1H2BAQ96A08 127 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 TVP23CQ96ET8 276 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 AQP10Q96PS8 301 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 ZFP30Q9Y2G7 519 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 CBY1Q9Y3M2 126 aa2.82□□□□□ -1.96
NIPBL-203ENST00000503274 DNAH8Q96JB1 4490 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 A0A087WX48 190 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 IGHV3-73A0A0B4J1V6 119 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 CTXND1A0A1B0GTU2 59 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 B4DEV8 164 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 PTTG1O95997 202 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 IGHV3-30P01768 117 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 IGHV3-33P01772 117 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 IGHV3-30-3P0DP02 117 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 IGHV3-30-5P0DP03 117 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 UBE2G1P62253 170 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 FAM162BQ5T6X4 162 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 Q5VSD8 79 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 Q8N814 137 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 TCEAL7Q9BRU2 100 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 IL36BQ9NZH7 164 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 PHLDA3Q9Y5J5 127 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 ALG5Q9Y673 324 aa2.81□□□□□ -1.96
NIPBL-203ENST00000503274 FXYD6-FXYD2A0A087WZ82 144 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 XKRY2A2RUG3 117 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 SMR3BP02814 79 aaPredicted RBP2.8□□□□□ -1.96
NIPBL-203ENST00000503274 S100A9P06702 114 aaKnown RBP2.8□□□□□ -1.96
NIPBL-203ENST00000503274 TPT1P13693 172 aaKnown RBP2.8□□□□□ -1.96
NIPBL-203ENST00000503274 FUSP35637 526 aaKnown RBP eCLIP2.8□□□□□ -1.96
NIPBL-203ENST00000503274 ZNF80P51504 273 aaPredicted RBP2.8□□□□□ -1.96
NIPBL-203ENST00000503274 UBE2G2P60604 165 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 PKIAP61925 76 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 RPL23P62829 140 aaKnown RBP2.8□□□□□ -1.96
NIPBL-203ENST00000503274 Q0VG73 95 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 DPPA3Q6W0C5 159 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 ZFP82Q8N141 532 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 OR2T35Q8NGX2 323 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 FMC1Q96HJ9 113 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 CHCHD7Q9BUK0 85 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 ARL2-SNX15V9GYD0 113 aa2.8□□□□□ -1.96
NIPBL-203ENST00000503274 A0A0J9YXV3 536 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 TRBV10-1A0A0K0K1A3 114 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 RBFOX3A6NFN3 312 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 KRBOX1C9JBD0 128 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 TMEM262E9PQX1 116 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 H3BVH4 76 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 M0R381 172 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 ARMS2P0C7Q2 107 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 RNASE3P12724 160 aaKnown RBP2.79□□□□□ -1.96
NIPBL-203ENST00000503274 TMEM97Q5BJF2 176 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 FAM74A4Q5TZK3 123 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 RPL7L1Q6DKI1 246 aaKnown RBP2.79□□□□□ -1.96
NIPBL-203ENST00000503274 Q86TA4 180 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 SPANXA2-OT1Q8N9U9 137 aa2.79□□□□□ -1.96
NIPBL-203ENST00000503274 TRBV7-3A0A075B6L6 115 aa2.78□□□□□ -1.96
NIPBL-203ENST00000503274 TRBV6-1A0A0K0K1D8 114 aa2.78□□□□□ -1.96
NIPBL-203ENST00000503274 GRIFINA4D1Z8 144 aa2.78□□□□□ -1.96
NIPBL-203ENST00000503274 MAP1LC3B2A6NCE7 125 aa2.78□□□□□ -1.96
NIPBL-203ENST00000503274 UMAD1C9J7I0 102 aa2.78□□□□□ -1.96
NIPBL-203ENST00000503274 TEX46H3BTG2 121 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms