RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 MPDZO75970 2070 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 IGHV3OR16-9A0A0B4J2B5 98 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 IGKV3D-7A0A0C4DH55 119 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 BUB1B-PAK6H3BSN5 160 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 IGHV3-13P01766 116 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 CCL3P10147 92 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 LINC00313P59037 77 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 LINC00205P59089 165 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 BPESC1Q9GZL8 116 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 FAM215AQ9Y5M1 114 aa4.76□□□□□ -1.65
CLCN3-203ENST00000502998 HRNRQ86YZ3 2850 aaPredicted RBP4.75□□□□□ -1.65
CLCN3-203ENST00000502998 SDHAF1A6NFY7 115 aa4.75□□□□□ -1.65
CLCN3-203ENST00000502998 CLPSP04118 112 aa4.75□□□□□ -1.65
CLCN3-203ENST00000502998 IGKV3-11P04433 115 aa4.75□□□□□ -1.65
CLCN3-203ENST00000502998 FAM229BQ4G0N7 80 aa4.75□□□□□ -1.65
CLCN3-203ENST00000502998 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
CLCN3-203ENST00000502998 LINC00337Q8N6G1 96 aa4.75□□□□□ -1.65
CLCN3-203ENST00000502998 NRACQ8N912 160 aa4.75□□□□□ -1.65
CLCN3-203ENST00000502998 MXRA5Q9NR99 2828 aa4.75□□□□□ -1.65
CLCN3-203ENST00000502998 A0A087WVE0 104 aa4.74□□□□□ -1.65
CLCN3-203ENST00000502998 H7C2G1 150 aa4.74□□□□□ -1.65
CLCN3-203ENST00000502998 GYPEP15421 78 aa4.74□□□□□ -1.65
CLCN3-203ENST00000502998 RNASE4P34096 147 aaKnown RBP4.74□□□□□ -1.65
CLCN3-203ENST00000502998 Q8IYB0 196 aa4.74□□□□□ -1.65
CLCN3-203ENST00000502998 LINC00269Q8N2A0 174 aa4.74□□□□□ -1.65
CLCN3-203ENST00000502998 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
CLCN3-203ENST00000502998 SMAD5-AS1Q9Y6J3 95 aa4.74□□□□□ -1.65
CLCN3-203ENST00000502998 HIVEP2P31629 2446 aa4.74□□□□□ -1.65
CLCN3-203ENST00000502998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLCN3-203ENST00000502998 C11orf86A6NJI1 115 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 SYCNQ0VAF6 134 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 MORN5Q5VZ52 161 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 FOXL2NBQ6ZUU3 175 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 Q8N6K4 173 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 RMI2Q96E14 147 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 TMEM141Q96I45 108 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 FAM167A-AS1Q96KT0 104 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 SCGB3A1Q96QR1 104 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 PRR25Q96S07 402 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 CYP4F30PQ9H0H9 118 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 ZNF407Q9C0G0 2248 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 ROS1P08922 2347 aa4.73□□□□□ -1.65
CLCN3-203ENST00000502998 IGLV2-18A0A075B6J9 118 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 hDV103S1A0JD37 113 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 M0R3E3 92 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 EIF4EBP3O60516 100 aaPredicted RBP4.72□□□□□ -1.65
CLCN3-203ENST00000502998 BAALC-AS2P0C853 105 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 RPL28P46779 137 aaKnown RBP4.72□□□□□ -1.65
CLCN3-203ENST00000502998 FXYD7P58549 80 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 NNATQ16517 81 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 ASB16-AS1Q495Z4 193 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 SPANXN1Q5VSR9 72 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 FAM53AQ6NSI3 398 aaPredicted RBP4.72□□□□□ -1.65
CLCN3-203ENST00000502998 LINC00322Q6ZN03 302 aaPredicted RBP4.72□□□□□ -1.65
CLCN3-203ENST00000502998 Q6ZPA2 131 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 Q86TA4 180 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 MUSTN1Q8IVN3 82 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 Q9HAA7 133 aa4.72□□□□□ -1.65
CLCN3-203ENST00000502998 ANK3Q12955 4377 aaKnown RBP4.72□□□□□ -1.65
CLCN3-203ENST00000502998 TRAV23DV6A0A075B6W5 121 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 A0A087X002 238 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 I3L3M4 83 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 PSPHP1O15172 72 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 TRBV12-3P01733 135 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 SAA1P0DJI8 122 aaPredicted RBP4.71□□□□□ -1.66
CLCN3-203ENST00000502998 HOXA4Q00056 320 aaPredicted RBP4.71□□□□□ -1.66
CLCN3-203ENST00000502998 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 CLEC2BQ92478 149 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 RNF185Q96GF1 192 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
CLCN3-203ENST00000502998 A0A087WZ39 114 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 IGKV1-6A0A0C4DH72 117 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 IGIPA6NJ69 53 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 PRYO14603 147 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 LEPROTO15243 131 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 PRM2P04554 102 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 PRR3P79522 188 aaKnown RBP4.7□□□□□ -1.66
CLCN3-203ENST00000502998 FBXL19-AS1Q494R0 122 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 Q6ZRP5 223 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 Q6ZS46 218 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 NOTCH2NLQ7Z3S9 236 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 C9orf106Q8NAJ2 232 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 C11orf72Q8NBR9 251 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 OBSCN-AS1Q96MR7 158 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 SMR3AQ99954 134 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 LINC00846Q9NV44 126 aa4.7□□□□□ -1.66
CLCN3-203ENST00000502998 TRAV22A0A0B4J277 110 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 IGHV1-69DA0A0B4J2H0 117 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 SOCS3O14543 225 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 GNRH2O43555 120 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 PPP1R17O96001 155 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 IGLV2-14P01704 120 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 IGHV3-9P01782 118 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 EGR2P11161 476 aaPredicted RBP4.69□□□□□ -1.66
CLCN3-203ENST00000502998 DAZAP2Q15038 168 aaPredicted RBP4.69□□□□□ -1.66
CLCN3-203ENST00000502998 PIGYQ3MUY2 71 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 C6orf99Q4VX62 202 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 Q6ZTC4 211 aa4.69□□□□□ -1.66
CLCN3-203ENST00000502998 PRNTQ86SH4 94 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms