RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 C1orf196B1AJZ1 125 aa10.74□□□□□ -0.69
HERC6-204ENST00000502870 TSPAN13O95857 204 aa10.74□□□□□ -0.69
HERC6-204ENST00000502870 PMCHP20382 165 aa10.74□□□□□ -0.69
HERC6-204ENST00000502870 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
HERC6-204ENST00000502870 FAM210AQ96ND0 272 aa10.74□□□□□ -0.69
HERC6-204ENST00000502870 CDC42SE2Q9NRR3 84 aa10.74□□□□□ -0.69
HERC6-204ENST00000502870 ALG5Q9Y673 324 aa10.74□□□□□ -0.69
HERC6-204ENST00000502870 C19orf71A6NCJ1 209 aa10.73□□□□□ -0.69
HERC6-204ENST00000502870 CTRLP40313 264 aa10.73□□□□□ -0.69
HERC6-204ENST00000502870 CENPWQ5EE01 88 aa10.73□□□□□ -0.69
HERC6-204ENST00000502870 SMIM15Q7Z3B0 74 aa10.73□□□□□ -0.69
HERC6-204ENST00000502870 C9orf62Q8N4C0 152 aa10.73□□□□□ -0.69
HERC6-204ENST00000502870 KCNRGQ8N5I3 272 aa10.73□□□□□ -0.69
HERC6-204ENST00000502870 A0A1B0GV50 99 aa10.72□□□□□ -0.69
HERC6-204ENST00000502870 Q5BKY6 102 aa10.72□□□□□ -0.69
HERC6-204ENST00000502870 MRPL52Q86TS9 123 aaKnown RBP10.72□□□□□ -0.69
HERC6-204ENST00000502870 MBD3L1Q8WWY6 194 aa10.72□□□□□ -0.69
HERC6-204ENST00000502870 SMIM12Q96EX1 92 aa10.72□□□□□ -0.69
HERC6-204ENST00000502870 IMMP2LQ96T52 175 aa10.72□□□□□ -0.69
HERC6-204ENST00000502870 OPRPNQ99935 248 aaPredicted RBP10.72□□□□□ -0.69
HERC6-204ENST00000502870 GIPP09681 153 aaPredicted RBP10.71□□□□□ -0.69
HERC6-204ENST00000502870 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
HERC6-204ENST00000502870 BIN3Q9NQY0 253 aa10.71□□□□□ -0.69
HERC6-204ENST00000502870 UBE2BP63146 152 aa10.7□□□□□ -0.7
HERC6-204ENST00000502870 FAM213BQ8TBF2 198 aa10.7□□□□□ -0.7
HERC6-204ENST00000502870 UMAD1C9J7I0 102 aa10.69□□□□□ -0.7
HERC6-204ENST00000502870 G3V3Q6 166 aa10.69□□□□□ -0.7
HERC6-204ENST00000502870 GNG4P50150 75 aa10.69□□□□□ -0.7
HERC6-204ENST00000502870 SPAG11BQ08648 103 aa10.69□□□□□ -0.7
HERC6-204ENST00000502870 FAM19A5Q7Z5A7 132 aaPredicted RBP10.69□□□□□ -0.7
HERC6-204ENST00000502870 KRTAP11-1Q8IUC1 163 aa10.69□□□□□ -0.7
HERC6-204ENST00000502870 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
HERC6-204ENST00000502870 FSIP2Q5CZC0 6907 aa10.69□□□□□ -0.7
HERC6-204ENST00000502870 FAM168BA1KXE4 195 aa10.68□□□□□ -0.7
HERC6-204ENST00000502870 F8WDY8 70 aa10.68□□□□□ -0.7
HERC6-204ENST00000502870 SMAGPQ0VAQ4 97 aa10.68□□□□□ -0.7
HERC6-204ENST00000502870 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
HERC6-204ENST00000502870 MRPL35Q9NZE8 188 aaKnown RBP10.68□□□□□ -0.7
HERC6-204ENST00000502870 CDIP1Q9H305 208 aa10.67□□□□□ -0.7
HERC6-204ENST00000502870 TRBV6-5A0A0K0K1A5 114 aa10.66□□□□□ -0.7
HERC6-204ENST00000502870 C7orf77A4D0Y5 90 aa10.66□□□□□ -0.7
HERC6-204ENST00000502870 TSHBP01222 138 aa10.66□□□□□ -0.7
HERC6-204ENST00000502870 MANBALQ9NQG1 85 aa10.66□□□□□ -0.7
HERC6-204ENST00000502870 CYTL1Q9NRR1 136 aa10.66□□□□□ -0.7
HERC6-204ENST00000502870 TMEM242Q9NWH2 141 aa10.66□□□□□ -0.7
HERC6-204ENST00000502870 CRCT1Q9UGL9 99 aa10.66□□□□□ -0.7
HERC6-204ENST00000502870 M0QXV9 152 aa10.65□□□□□ -0.7
HERC6-204ENST00000502870 NDUFA1O15239 70 aa10.65□□□□□ -0.7
HERC6-204ENST00000502870 CCL20P78556 96 aa10.65□□□□□ -0.7
HERC6-204ENST00000502870 C5orf38Q86SI9 138 aa10.65□□□□□ -0.7
HERC6-204ENST00000502870 ST20Q9HBF5 79 aa10.65□□□□□ -0.7
HERC6-204ENST00000502870 H2AFB1P0C5Y9 115 aa10.64□□□□□ -0.71
HERC6-204ENST00000502870 TLX1NBP0CAT3 122 aa10.64□□□□□ -0.71
HERC6-204ENST00000502870 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
HERC6-204ENST00000502870 TRAV13-1A0A0B4J241 112 aa10.63□□□□□ -0.71
HERC6-204ENST00000502870 TMEM241Q24JQ0 296 aa10.63□□□□□ -0.71
HERC6-204ENST00000502870 CSDC2Q9Y534 153 aaKnown RBP10.63□□□□□ -0.71
HERC6-204ENST00000502870 RAB19A4D1S5 217 aa10.62□□□□□ -0.71
HERC6-204ENST00000502870 ARPC5O15511 151 aa10.62□□□□□ -0.71
HERC6-204ENST00000502870 ZNF861PO60384 105 aa10.62□□□□□ -0.71
HERC6-204ENST00000502870 GAGE2EQ4V326 116 aa10.61□□□□□ -0.71
HERC6-204ENST00000502870 NUDT10Q8NFP7 164 aa10.61□□□□□ -0.71
HERC6-204ENST00000502870 ORAOV1Q8WV07 137 aa10.61□□□□□ -0.71
HERC6-204ENST00000502870 NUDT11Q96G61 164 aa10.61□□□□□ -0.71
HERC6-204ENST00000502870 GNG13Q9P2W3 67 aa10.61□□□□□ -0.71
HERC6-204ENST00000502870 GAGE2DQ9UEU5 116 aa10.61□□□□□ -0.71
HERC6-204ENST00000502870 TPRXLQ17RH7 258 aa10.6□□□□□ -0.71
HERC6-204ENST00000502870 TYMSOSQ8TAI1 123 aa10.6□□□□□ -0.71
HERC6-204ENST00000502870 SMDT1Q9H4I9 107 aa10.6□□□□□ -0.71
HERC6-204ENST00000502870 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
HERC6-204ENST00000502870 CRYGAP11844 174 aa10.59□□□□□ -0.71
HERC6-204ENST00000502870 FCER1GP30273 86 aa10.59□□□□□ -0.71
HERC6-204ENST00000502870 FOXA3P55318 350 aaPredicted RBP10.59□□□□□ -0.71
HERC6-204ENST00000502870 PDE6DO43924 150 aa10.58□□□□□ -0.72
HERC6-204ENST00000502870 RNASE7Q9H1E1 156 aaKnown RBP10.58□□□□□ -0.72
HERC6-204ENST00000502870 NUPR1O60356 82 aa10.57□□□□□ -0.72
HERC6-204ENST00000502870 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
HERC6-204ENST00000502870 LINC01547P58512 204 aaPredicted RBP10.57□□□□□ -0.72
HERC6-204ENST00000502870 RNASE13Q5GAN3 156 aaKnown RBP10.57□□□□□ -0.72
HERC6-204ENST00000502870 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
HERC6-204ENST00000502870 TRBV20OR9-2A0A075B6H5 130 aa10.56□□□□□ -0.72
HERC6-204ENST00000502870 KRTAP7-1Q8IUC3 87 aa10.56□□□□□ -0.72
HERC6-204ENST00000502870 MED9Q9NWA0 146 aa10.56□□□□□ -0.72
HERC6-204ENST00000502870 C6orf48Q9UBA6 75 aa10.56□□□□□ -0.72
HERC6-204ENST00000502870 A0A087X002 238 aa10.55□□□□□ -0.72
HERC6-204ENST00000502870 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
HERC6-204ENST00000502870 RETNLBQ9BQ08 111 aa10.55□□□□□ -0.72
HERC6-204ENST00000502870 TEX46H3BTG2 121 aa10.54□□□□□ -0.72
HERC6-204ENST00000502870 VCYO14598 125 aa10.54□□□□□ -0.72
HERC6-204ENST00000502870 UNQ6190/PRO20217Q6UXQ8 127 aa10.54□□□□□ -0.72
HERC6-204ENST00000502870 TMEM18Q96B42 140 aa10.54□□□□□ -0.72
HERC6-204ENST00000502870 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
HERC6-204ENST00000502870 IGLV7-46A0A075B6I9 117 aa10.53□□□□□ -0.72
HERC6-204ENST00000502870 TIMM21Q9BVV7 248 aa10.53□□□□□ -0.72
HERC6-204ENST00000502870 MUC17Q685J3 4493 aa10.52□□□□□ -0.73
HERC6-204ENST00000502870 RPL28P46779 137 aaKnown RBP10.52□□□□□ -0.73
HERC6-204ENST00000502870 ZNF345Q14585 488 aa10.52□□□□□ -0.73
HERC6-204ENST00000502870 Q6ZUT4 128 aa10.52□□□□□ -0.73
HERC6-204ENST00000502870 KIR2DL4Q99706 377 aa10.52□□□□□ -0.73
HERC6-204ENST00000502870 TRBV30A0A0K0K1B3 111 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms