RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 TRGV3P03979 118 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 CFC1BP0CG36 223 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 CFC1P0CG37 223 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 INAFM2P0DMQ5 153 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 IGHV3-30-5P0DP03 117 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 MFAP4P55083 255 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 ERCC8Q13216 396 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 MLANAQ16655 118 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 LINC01620Q4KN68 170 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 EXOC3-AS1Q8N2X6 119 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 NRACQ8N912 160 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 ZNRF2Q8NHG8 242 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 PLEKHB2Q96CS7 222 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 LINC00526Q96FQ7 95 aa3.78□□□□□ -1.8
HTT-202ENST00000502820 TRAV4A0A0B4J268 109 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 TRAV25A0A0B4J276 109 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 TEX22C9J3V5 150 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 C9JAW5 83 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 J3QL48 77 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 RTL8CO15255 209 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 DEFB4AO15263 64 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 TRBV12-3P01733 135 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 IGHV3-33P01772 117 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
HTT-202ENST00000502820 TMEM258P61165 79 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 SUMO2P61956 95 aaKnown RBP3.77□□□□□ -1.81
HTT-202ENST00000502820 KLK9Q2XQG4 91 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 C10orf55Q5SWW7 151 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 FAM159AQ6UWV7 190 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 LINC00643Q86TS7 51 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 Q8N1X5 172 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 C3orf22Q8N5N4 141 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 POM121L12Q8N7R1 296 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 C11orf45Q8TAV5 145 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 USMG5Q96IX5 58 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 DPH3P1Q9H4G8 78 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 KLK9Q9UKQ9 250 aa3.77□□□□□ -1.81
HTT-202ENST00000502820 A0A0J9YXY3 114 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 FAM223BA6NKX1 122 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 EPM2AB3EWF7 344 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 NDUFC2-KCTD14E9PQ53 114 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 CCDC179H3BU77 68 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 H3BVH4 76 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 LEPROTO15243 131 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 TIMM17BO60830 172 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 CRYGAP11844 174 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 RHOHQ15669 191 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 C9orf153Q5TBE3 101 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 SPANXN1Q5VSR9 72 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 C2orf66Q6UXQ4 117 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 FAM223AQ8IWN6 122 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 DAND5Q8N907 189 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 BAALCQ8WXS3 180 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 C8orf49Q96NF6 230 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 FANCD2OSQ96PS1 177 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 ODF3Q96PU9 254 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 TTTY13Q9BZ97 58 aa3.76□□□□□ -1.81
HTT-202ENST00000502820 MRPL36Q9P0J6 103 aaKnown RBP3.76□□□□□ -1.81
HTT-202ENST00000502820 CSDC2Q9Y534 153 aaKnown RBP3.76□□□□□ -1.81
HTT-202ENST00000502820 VPS13DQ5THJ4 4388 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 SMIM9A6NGZ8 99 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 E7EUB6 86 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 J3QQQ9 107 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 K7EIM0 57 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 NXPH4O95158 308 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 APELAP0DMC3 54 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 RPL35AP18077 110 aaKnown RBP3.75□□□□□ -1.81
HTT-202ENST00000502820 ZNF415Q09FC8 603 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 C2orf82Q6UX34 121 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 ZFP2Q6ZN57 461 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 SDIM1Q6ZPB5 146 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 C9orf47Q6ZRZ4 202 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 UBE2DNLQ8IWF7 75 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 NTN5Q8WTR8 489 aaPredicted RBP3.75□□□□□ -1.81
HTT-202ENST00000502820 TMEM263Q8WUH6 116 aaKnown RBP3.75□□□□□ -1.81
HTT-202ENST00000502820 LINC01587Q99440 93 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 KIR2DL4Q99706 377 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 PEMTQ9UBM1 199 aa3.75□□□□□ -1.81
HTT-202ENST00000502820 IGLV11-55A0A075B6I3 123 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 TRAV21A0A0B4J279 112 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 TRBV6-5A0A0K0K1A5 114 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 SMKR1H3BMG3 65 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 LST1O00453 97 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 CDK2AP2O75956 126 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 COX7CP15954 63 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 APOC4P55056 127 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 Q1RN00 199 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 C15orf32Q32M92 178 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 ZNF876PQ49A33 203 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 FAM222AQ5U5X8 452 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 CCDC140Q96MF4 163 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 METTL26Q96S19 204 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 APLNQ9ULZ1 77 aa3.74□□□□□ -1.81
HTT-202ENST00000502820 IGKV2-40A0A087WW87 121 aaPredicted RBP3.73□□□□□ -1.81
HTT-202ENST00000502820 TMSB15BA0A087X1C1 80 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 IGHV7-4-1A0A0J9YVY3 117 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 M0R3E3 92 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 VCYO14598 125 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 IGKV2D-40P01614 121 aaPredicted RBP3.73□□□□□ -1.81
HTT-202ENST00000502820 EDN2P20800 178 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms