RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CDC42SE2Q9NRR3 84 aa9.28□□□□□ -0.92
HDAC6-236ENST00000498808 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 XKRY2A2RUG3 117 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 TSPAN13O95857 204 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 IFNA1P01562 189 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 GIPP09681 153 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-236ENST00000498808 MALP21145 153 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 TWIST1Q15672 202 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 C9orf62Q8N4C0 152 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 KCNRGQ8N5I3 272 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 C11orf52Q96A22 123 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 CNFNQ9BYD5 112 aa9.27□□□□□ -0.93
HDAC6-236ENST00000498808 COX7A2LO14548 114 aa9.26□□□□□ -0.93
HDAC6-236ENST00000498808 FAM213BQ8TBF2 198 aa9.26□□□□□ -0.93
HDAC6-236ENST00000498808 I3L3M4 83 aa9.25□□□□□ -0.93
HDAC6-236ENST00000498808 MRPL52Q86TS9 123 aaKnown RBP9.25□□□□□ -0.93
HDAC6-236ENST00000498808 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
HDAC6-236ENST00000498808 TSHBP01222 138 aa9.24□□□□□ -0.93
HDAC6-236ENST00000498808 PMCHP20382 165 aa9.24□□□□□ -0.93
HDAC6-236ENST00000498808 FOXA3P55318 350 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-236ENST00000498808 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
HDAC6-236ENST00000498808 MRAP2Q96G30 205 aa9.24□□□□□ -0.93
HDAC6-236ENST00000498808 CARHSP1Q9Y2V2 147 aaKnown RBP9.24□□□□□ -0.93
HDAC6-236ENST00000498808 RAB19A4D1S5 217 aa9.23□□□□□ -0.93
HDAC6-236ENST00000498808 G3V3Q6 166 aa9.23□□□□□ -0.93
HDAC6-236ENST00000498808 FAM19A5Q7Z5A7 132 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-236ENST00000498808 KRTAP7-1Q8IUC3 87 aa9.23□□□□□ -0.93
HDAC6-236ENST00000498808 TMEM242Q9NWH2 141 aa9.23□□□□□ -0.93
HDAC6-236ENST00000498808 C1orf196B1AJZ1 125 aa9.22□□□□□ -0.93
HDAC6-236ENST00000498808 SPAG11BQ08648 103 aa9.22□□□□□ -0.93
HDAC6-236ENST00000498808 C5orf38Q86SI9 138 aa9.22□□□□□ -0.93
HDAC6-236ENST00000498808 TRBV20OR9-2A0A075B6H5 130 aa9.21□□□□□ -0.94
HDAC6-236ENST00000498808 TRBV6-5A0A0K0K1A5 114 aa9.21□□□□□ -0.94
HDAC6-236ENST00000498808 CCL20P78556 96 aa9.21□□□□□ -0.94
HDAC6-236ENST00000498808 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-236ENST00000498808 SMIM12Q96EX1 92 aa9.21□□□□□ -0.94
HDAC6-236ENST00000498808 RNASE7Q9H1E1 156 aaKnown RBP9.21□□□□□ -0.94
HDAC6-236ENST00000498808 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.94
HDAC6-236ENST00000498808 ARPC5O15511 151 aa9.2□□□□□ -0.94
HDAC6-236ENST00000498808 GNG4P50150 75 aa9.2□□□□□ -0.94
HDAC6-236ENST00000498808 TEX261Q6UWH6 196 aa9.2□□□□□ -0.94
HDAC6-236ENST00000498808 NUDT10Q8NFP7 164 aa9.2□□□□□ -0.94
HDAC6-236ENST00000498808 NUDT11Q96G61 164 aa9.2□□□□□ -0.94
HDAC6-236ENST00000498808 RPP21Q9H633 154 aaKnown RBP9.2□□□□□ -0.94
HDAC6-236ENST00000498808 MRPL35Q9NZE8 188 aaKnown RBP9.2□□□□□ -0.94
HDAC6-236ENST00000498808 UMAD1C9J7I0 102 aa9.19□□□□□ -0.94
HDAC6-236ENST00000498808 H2AFB1P0C5Y9 115 aa9.19□□□□□ -0.94
HDAC6-236ENST00000498808 RNASE13Q5GAN3 156 aaKnown RBP9.19□□□□□ -0.94
HDAC6-236ENST00000498808 TRAV13-1A0A0B4J241 112 aa9.18□□□□□ -0.94
HDAC6-236ENST00000498808 C7orf77A4D0Y5 90 aa9.18□□□□□ -0.94
HDAC6-236ENST00000498808 M0QXV9 152 aa9.18□□□□□ -0.94
HDAC6-236ENST00000498808 UBE2BP63146 152 aa9.18□□□□□ -0.94
HDAC6-236ENST00000498808 C10orf25Q5T742 122 aa9.18□□□□□ -0.94
HDAC6-236ENST00000498808 IMMP2LQ96T52 175 aa9.18□□□□□ -0.94
HDAC6-236ENST00000498808 MANBALQ9NQG1 85 aa9.18□□□□□ -0.94
HDAC6-236ENST00000498808 GNG13Q9P2W3 67 aa9.18□□□□□ -0.94
HDAC6-236ENST00000498808 TLX1NBP0CAT3 122 aa9.17□□□□□ -0.94
HDAC6-236ENST00000498808 SMIM15Q7Z3B0 74 aa9.17□□□□□ -0.94
HDAC6-236ENST00000498808 A0A087X002 238 aa9.16□□□□□ -0.94
HDAC6-236ENST00000498808 POLR2KP53803 58 aaKnown RBP9.16□□□□□ -0.94
HDAC6-236ENST00000498808 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
HDAC6-236ENST00000498808 OR10D4PQ8NGN7 298 aa9.16□□□□□ -0.94
HDAC6-236ENST00000498808 FAM210AQ96ND0 272 aa9.16□□□□□ -0.94
HDAC6-236ENST00000498808 ST20Q9HBF5 79 aa9.16□□□□□ -0.94
HDAC6-236ENST00000498808 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
HDAC6-236ENST00000498808 FSIP2Q5CZC0 6907 aa9.16□□□□□ -0.94
HDAC6-236ENST00000498808 ZNF861PO60384 105 aa9.15□□□□□ -0.94
HDAC6-236ENST00000498808 ORAOV1Q8WV07 137 aa9.15□□□□□ -0.94
HDAC6-236ENST00000498808 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.94
HDAC6-236ENST00000498808 SMDT1Q9H4I9 107 aa9.15□□□□□ -0.94
HDAC6-236ENST00000498808 BIN3Q9NQY0 253 aa9.15□□□□□ -0.94
HDAC6-236ENST00000498808 C6orf48Q9UBA6 75 aa9.15□□□□□ -0.94
HDAC6-236ENST00000498808 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
HDAC6-236ENST00000498808 CSDC2Q9Y534 153 aaKnown RBP9.15□□□□□ -0.94
HDAC6-236ENST00000498808 TRBV27A0A0K0K1C4 114 aa9.14□□□□□ -0.95
HDAC6-236ENST00000498808 NDUFA1O15239 70 aa9.14□□□□□ -0.95
HDAC6-236ENST00000498808 UNQ6190/PRO20217Q6UXQ8 127 aa9.14□□□□□ -0.95
HDAC6-236ENST00000498808 Q6ZUT4 128 aa9.14□□□□□ -0.95
HDAC6-236ENST00000498808 F8WDY8 70 aa9.13□□□□□ -0.95
HDAC6-236ENST00000498808 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
HDAC6-236ENST00000498808 TPRXLQ17RH7 258 aa9.12□□□□□ -0.95
HDAC6-236ENST00000498808 K7EN84 100 aa9.11□□□□□ -0.95
HDAC6-236ENST00000498808 TMEM241Q24JQ0 296 aa9.11□□□□□ -0.95
HDAC6-236ENST00000498808 TYMSOSQ8TAI1 123 aa9.11□□□□□ -0.95
HDAC6-236ENST00000498808 MED9Q9NWA0 146 aa9.11□□□□□ -0.95
HDAC6-236ENST00000498808 SMLR1H3BR10 107 aa9.1□□□□□ -0.95
HDAC6-236ENST00000498808 PDE6DO43924 150 aa9.1□□□□□ -0.95
HDAC6-236ENST00000498808 IGHV3OR16-9A0A0B4J2B5 98 aa9.09□□□□□ -0.95
HDAC6-236ENST00000498808 ZNF345Q14585 488 aa9.09□□□□□ -0.95
HDAC6-236ENST00000498808 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
HDAC6-236ENST00000498808 CRYGAP11844 174 aa9.08□□□□□ -0.96
HDAC6-236ENST00000498808 FCER1GP30273 86 aa9.08□□□□□ -0.96
HDAC6-236ENST00000498808 SMAGPQ0VAQ4 97 aa9.07□□□□□ -0.96
HDAC6-236ENST00000498808 OCC1Q8TAD7 63 aa9.07□□□□□ -0.96
HDAC6-236ENST00000498808 FAM104AQ969W3 186 aa9.07□□□□□ -0.96
HDAC6-236ENST00000498808 VCYO14598 125 aa9.06□□□□□ -0.96
HDAC6-236ENST00000498808 RAB4AP20338 218 aa9.06□□□□□ -0.96
HDAC6-236ENST00000498808 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
HDAC6-236ENST00000498808 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
HDAC6-236ENST00000498808 IGLV7-46A0A075B6I9 117 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms