RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TWIST1Q15672 202 aa5.49□□□□□ -1.53
CCDC171-209ENST00000498725 KCNRGQ8N5I3 272 aa5.49□□□□□ -1.53
CCDC171-209ENST00000498725 FAM213BQ8TBF2 198 aa5.49□□□□□ -1.53
CCDC171-209ENST00000498725 ISOC2Q96AB3 205 aa5.49□□□□□ -1.53
CCDC171-209ENST00000498725 CAMK2N2Q96S95 79 aa5.49□□□□□ -1.53
CCDC171-209ENST00000498725 NDUFA13Q9P0J0 144 aa5.49□□□□□ -1.53
CCDC171-209ENST00000498725 IGLV1-50A0A075B6I6 118 aa5.48□□□□□ -1.53
CCDC171-209ENST00000498725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.48□□□□□ -1.53
CCDC171-209ENST00000498725 IFNA1P01562 189 aa5.48□□□□□ -1.53
CCDC171-209ENST00000498725 PMCHP20382 165 aa5.48□□□□□ -1.53
CCDC171-209ENST00000498725 MEF2BQ02080 365 aaPredicted RBP5.48□□□□□ -1.53
CCDC171-209ENST00000498725 CENPWQ5EE01 88 aa5.48□□□□□ -1.53
CCDC171-209ENST00000498725 KRTAP11-1Q8IUC1 163 aa5.48□□□□□ -1.53
CCDC171-209ENST00000498725 NUP35Q8NFH5 326 aa5.48□□□□□ -1.53
CCDC171-209ENST00000498725 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
CCDC171-209ENST00000498725 TRAV1-1A0A0B4J248 108 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 FAM168BA1KXE4 195 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 RAB19A4D1S5 217 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 SDHAF1A6NFY7 115 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 F2Z2F3 143 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 H7C423 109 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 APOMO95445 188 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 NCR2O95944 276 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 CD164L2Q6UWJ8 174 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 FAM19A5Q7Z5A7 132 aaPredicted RBP5.47□□□□□ -1.53
CCDC171-209ENST00000498725 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
CCDC171-209ENST00000498725 XKRY2A2RUG3 117 aa5.46□□□□□ -1.54
CCDC171-209ENST00000498725 BCL2L11O43521 198 aa5.46□□□□□ -1.54
CCDC171-209ENST00000498725 KRTAP1-4P0C5Y4 121 aa5.46□□□□□ -1.54
CCDC171-209ENST00000498725 ZNF25P17030 456 aaPredicted RBP5.46□□□□□ -1.54
CCDC171-209ENST00000498725 FOXA3P55318 350 aaPredicted RBP5.46□□□□□ -1.54
CCDC171-209ENST00000498725 RNASE13Q5GAN3 156 aaKnown RBP5.46□□□□□ -1.54
CCDC171-209ENST00000498725 EIF5AL1Q6IS14 154 aaKnown RBP5.46□□□□□ -1.54
CCDC171-209ENST00000498725 LINC00299Q6ZSB3 139 aa5.46□□□□□ -1.54
CCDC171-209ENST00000498725 CYTL1Q9NRR1 136 aa5.46□□□□□ -1.54
CCDC171-209ENST00000498725 TMEM242Q9NWH2 141 aa5.46□□□□□ -1.54
CCDC171-209ENST00000498725 C19orf71A6NCJ1 209 aa5.45□□□□□ -1.54
CCDC171-209ENST00000498725 COX7A2LO14548 114 aa5.45□□□□□ -1.54
CCDC171-209ENST00000498725 ARPC5O15511 151 aa5.45□□□□□ -1.54
CCDC171-209ENST00000498725 GIPP09681 153 aaPredicted RBP5.45□□□□□ -1.54
CCDC171-209ENST00000498725 C5orf38Q86SI9 138 aa5.45□□□□□ -1.54
CCDC171-209ENST00000498725 I3L3M4 83 aa5.44□□□□□ -1.54
CCDC171-209ENST00000498725 RPL13AP40429 203 aaKnown RBP5.44□□□□□ -1.54
CCDC171-209ENST00000498725 GNG4P50150 75 aa5.44□□□□□ -1.54
CCDC171-209ENST00000498725 UBE2BP63146 152 aa5.44□□□□□ -1.54
CCDC171-209ENST00000498725 MBD3L1Q8WWY6 194 aa5.44□□□□□ -1.54
CCDC171-209ENST00000498725 MRAP2Q96G30 205 aa5.44□□□□□ -1.54
CCDC171-209ENST00000498725 CDC42SE2Q9NRR3 84 aa5.44□□□□□ -1.54
CCDC171-209ENST00000498725 GNG13Q9P2W3 67 aa5.44□□□□□ -1.54
CCDC171-209ENST00000498725 TRAV13-1A0A0B4J241 112 aa5.43□□□□□ -1.54
CCDC171-209ENST00000498725 TSHBP01222 138 aa5.43□□□□□ -1.54
CCDC171-209ENST00000498725 CTRLP40313 264 aa5.43□□□□□ -1.54
CCDC171-209ENST00000498725 CCL20P78556 96 aa5.43□□□□□ -1.54
CCDC171-209ENST00000498725 SPAG11BQ08648 103 aa5.43□□□□□ -1.54
CCDC171-209ENST00000498725 SMIM15Q7Z3B0 74 aa5.43□□□□□ -1.54
CCDC171-209ENST00000498725 C1orf196B1AJZ1 125 aa5.42□□□□□ -1.54
CCDC171-209ENST00000498725 ESDP10768 282 aa5.42□□□□□ -1.54
CCDC171-209ENST00000498725 GAGE2EQ4V326 116 aa5.42□□□□□ -1.54
CCDC171-209ENST00000498725 C9orf62Q8N4C0 152 aa5.42□□□□□ -1.54
CCDC171-209ENST00000498725 NUDT10Q8NFP7 164 aa5.42□□□□□ -1.54
CCDC171-209ENST00000498725 NUDT11Q96G61 164 aa5.42□□□□□ -1.54
CCDC171-209ENST00000498725 C2orf48Q96LS8 159 aa5.42□□□□□ -1.54
CCDC171-209ENST00000498725 RNASE7Q9H1E1 156 aaKnown RBP5.42□□□□□ -1.54
CCDC171-209ENST00000498725 GAGE2DQ9UEU5 116 aa5.42□□□□□ -1.54
CCDC171-209ENST00000498725 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
CCDC171-209ENST00000498725 SMLR1H3BR10 107 aa5.41□□□□□ -1.54
CCDC171-209ENST00000498725 M0QXV9 152 aa5.41□□□□□ -1.54
CCDC171-209ENST00000498725 TSKUQ8WUA8 353 aa5.41□□□□□ -1.54
CCDC171-209ENST00000498725 C11orf52Q96A22 123 aa5.41□□□□□ -1.54
CCDC171-209ENST00000498725 RETNLBQ9BQ08 111 aa5.41□□□□□ -1.54
CCDC171-209ENST00000498725 ST20Q9HBF5 79 aa5.41□□□□□ -1.54
CCDC171-209ENST00000498725 MANBALQ9NQG1 85 aa5.41□□□□□ -1.54
CCDC171-209ENST00000498725 TRBV20OR9-2A0A075B6H5 130 aa5.4□□□□□ -1.54
CCDC171-209ENST00000498725 C7orf77A4D0Y5 90 aa5.4□□□□□ -1.54
CCDC171-209ENST00000498725 C10orf25Q5T742 122 aa5.4□□□□□ -1.54
CCDC171-209ENST00000498725 MRPL52Q86TS9 123 aaKnown RBP5.4□□□□□ -1.54
CCDC171-209ENST00000498725 ORAOV1Q8WV07 137 aa5.4□□□□□ -1.54
CCDC171-209ENST00000498725 RPP21Q9H633 154 aaKnown RBP5.4□□□□□ -1.54
CCDC171-209ENST00000498725 MED9Q9NWA0 146 aa5.4□□□□□ -1.54
CCDC171-209ENST00000498725 UMAD1C9J7I0 102 aa5.39□□□□□ -1.55
CCDC171-209ENST00000498725 G3V3Q6 166 aa5.39□□□□□ -1.55
CCDC171-209ENST00000498725 RNF151Q2KHN1 245 aa5.39□□□□□ -1.55
CCDC171-209ENST00000498725 TEX261Q6UWH6 196 aa5.39□□□□□ -1.55
CCDC171-209ENST00000498725 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
CCDC171-209ENST00000498725 Q6ZUT4 128 aa5.39□□□□□ -1.55
CCDC171-209ENST00000498725 KRTAP7-1Q8IUC3 87 aa5.39□□□□□ -1.55
CCDC171-209ENST00000498725 IMMP2LQ96T52 175 aa5.39□□□□□ -1.55
CCDC171-209ENST00000498725 TRBV6-5A0A0K0K1A5 114 aa5.38□□□□□ -1.55
CCDC171-209ENST00000498725 NDUFA1O15239 70 aa5.38□□□□□ -1.55
CCDC171-209ENST00000498725 FCER1GP30273 86 aa5.38□□□□□ -1.55
CCDC171-209ENST00000498725 CNFNQ9BYD5 112 aa5.38□□□□□ -1.55
CCDC171-209ENST00000498725 CDIP1Q9H305 208 aa5.38□□□□□ -1.55
CCDC171-209ENST00000498725 BIN3Q9NQY0 253 aa5.38□□□□□ -1.55
CCDC171-209ENST00000498725 CARHSP1Q9Y2V2 147 aaKnown RBP5.38□□□□□ -1.55
CCDC171-209ENST00000498725 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
CCDC171-209ENST00000498725 OR10D4PQ8NGN7 298 aa5.37□□□□□ -1.55
CCDC171-209ENST00000498725 TYMSOSQ8TAI1 123 aa5.37□□□□□ -1.55
CCDC171-209ENST00000498725 SMIM12Q96EX1 92 aa5.37□□□□□ -1.55
CCDC171-209ENST00000498725 MRPL35Q9NZE8 188 aaKnown RBP5.37□□□□□ -1.55
CCDC171-209ENST00000498725 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms