RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 TRBV10-2A0A0K0K1G8 114 aa11.94□□□□□ -0.5
COL6A1-206ENST00000498614 PRM2P04554 102 aa11.94□□□□□ -0.5
COL6A1-206ENST00000498614 NHLRC4P0CG21 123 aaPredicted RBP11.94□□□□□ -0.5
COL6A1-206ENST00000498614 MRPS36P82909 103 aaKnown RBP11.94□□□□□ -0.5
COL6A1-206ENST00000498614 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
COL6A1-206ENST00000498614 Q6ZSV7 163 aa11.93□□□□□ -0.5
COL6A1-206ENST00000498614 A8MZ25 164 aa11.93□□□□□ -0.5
COL6A1-206ENST00000498614 SNCGO76070 127 aa11.93□□□□□ -0.5
COL6A1-206ENST00000498614 PYGO1Q9Y3Y4 419 aa11.93□□□□□ -0.5
COL6A1-206ENST00000498614 LY6G6DO95868 133 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 RPL13AP40429 203 aaKnown RBP11.92□□□□□ -0.5
COL6A1-206ENST00000498614 NPC2P61916 151 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 GAGE2EQ4V326 116 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 LINC01600Q96MT4 127 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 GAGE2DQ9UEU5 116 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 RBMY1BA6NDE4 496 aaKnown RBP11.92□□□□□ -0.5
COL6A1-206ENST00000498614 RBMY1EA6NEQ0 496 aaKnown RBP11.92□□□□□ -0.5
COL6A1-206ENST00000498614 RBMY1DP0C7P1 496 aaKnown RBP11.92□□□□□ -0.5
COL6A1-206ENST00000498614 Q9UF83 564 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 NDUFA12Q9UI09 145 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 ICOSQ9Y6W8 199 aa11.92□□□□□ -0.5
COL6A1-206ENST00000498614 IGHV1-58A0A0C4DH39 117 aa11.91□□□□□ -0.5
COL6A1-206ENST00000498614 TMEM61Q8N0U2 210 aa11.91□□□□□ -0.5
COL6A1-206ENST00000498614 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
COL6A1-206ENST00000498614 H3BMM0 161 aa11.9□□□□□ -0.5
COL6A1-206ENST00000498614 UBE2WQ96B02 151 aa11.9□□□□□ -0.5
COL6A1-206ENST00000498614 SPANXDQ9BXN6 97 aa11.9□□□□□ -0.5
COL6A1-206ENST00000498614 SPANXCQ9NY87 97 aa11.9□□□□□ -0.5
COL6A1-206ENST00000498614 H7C423 109 aa11.9□□□□□ -0.51
COL6A1-206ENST00000498614 C2orf82Q6UX34 121 aa11.9□□□□□ -0.51
COL6A1-206ENST00000498614 Q8N2B8 174 aa11.9□□□□□ -0.51
COL6A1-206ENST00000498614 VSIG2Q96IQ7 327 aa11.9□□□□□ -0.51
COL6A1-206ENST00000498614 SS18L2Q9UHA2 77 aa11.9□□□□□ -0.51
COL6A1-206ENST00000498614 F8P00451 2351 aa11.89□□□□□ -0.51
COL6A1-206ENST00000498614 NDUFV3P56181 108 aaKnown RBP11.89□□□□□ -0.51
COL6A1-206ENST00000498614 GAGE5Q13069 117 aa11.89□□□□□ -0.51
COL6A1-206ENST00000498614 GAGE6Q13070 117 aa11.89□□□□□ -0.51
COL6A1-206ENST00000498614 MIAQ16674 131 aa11.89□□□□□ -0.51
COL6A1-206ENST00000498614 CLEC2BQ92478 149 aa11.89□□□□□ -0.51
COL6A1-206ENST00000498614 Q6ZSN1 163 aa11.88□□□□□ -0.51
COL6A1-206ENST00000498614 PEMTQ9UBM1 199 aa11.88□□□□□ -0.51
COL6A1-206ENST00000498614 C15orf53Q8NAA6 179 aa11.87□□□□□ -0.51
COL6A1-206ENST00000498614 C4orf3Q8WVX3 66 aa11.87□□□□□ -0.51
COL6A1-206ENST00000498614 EDA2RQ9HAV5 297 aa11.87□□□□□ -0.51
COL6A1-206ENST00000498614 TNFRSF18Q9Y5U5 241 aa11.87□□□□□ -0.51
COL6A1-206ENST00000498614 NIPBLQ6KC79 2804 aaeCLIP11.87□□□□□ -0.51
COL6A1-206ENST00000498614 B5MCH6 92 aa11.87□□□□□ -0.51
COL6A1-206ENST00000498614 DYNLRB2Q8TF09 96 aa11.87□□□□□ -0.51
COL6A1-206ENST00000498614 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-206ENST00000498614 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
COL6A1-206ENST00000498614 IGKV2-29A2NJV5 120 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-206ENST00000498614 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
COL6A1-206ENST00000498614 MAP6D1Q9H9H5 199 aa11.86□□□□□ -0.51
COL6A1-206ENST00000498614 UBE2D4Q9Y2X8 147 aa11.86□□□□□ -0.51
COL6A1-206ENST00000498614 TEP1Q99973 2627 aaKnown RBP11.86□□□□□ -0.51
COL6A1-206ENST00000498614 A8MTW9 85 aa11.85□□□□□ -0.51
COL6A1-206ENST00000498614 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
COL6A1-206ENST00000498614 INAFM1C9JVW0 142 aa11.85□□□□□ -0.51
COL6A1-206ENST00000498614 TTC32Q5I0X7 151 aa11.85□□□□□ -0.51
COL6A1-206ENST00000498614 DAND5Q8N907 189 aa11.85□□□□□ -0.51
COL6A1-206ENST00000498614 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-206ENST00000498614 COX6CP09669 75 aa11.84□□□□□ -0.51
COL6A1-206ENST00000498614 IFITM1P13164 125 aa11.84□□□□□ -0.51
COL6A1-206ENST00000498614 SETD2Q9BYW2 2564 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-206ENST00000498614 NACAE9PAV3 2078 aa11.84□□□□□ -0.51
COL6A1-206ENST00000498614 H3BT86 120 aa11.84□□□□□ -0.51
COL6A1-206ENST00000498614 LINC00467Q9BRT7 94 aa11.84□□□□□ -0.51
COL6A1-206ENST00000498614 CCDC179H3BU77 68 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 LST1O00453 97 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 DEFB114Q30KQ6 69 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 Q6Q795 121 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 C11orf44Q8N8P7 122 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 LINC01587Q99440 93 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 SPANXA1Q9NS26 97 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 IGHV3-38A0A0C4DH36 116 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 ZNF415Q09FC8 603 aa11.83□□□□□ -0.52
COL6A1-206ENST00000498614 ESM1Q9NQ30 184 aa11.82□□□□□ -0.52
COL6A1-206ENST00000498614 CDKN2A-AS1Q9UH64 79 aa11.82□□□□□ -0.52
COL6A1-206ENST00000498614 A0A1W2PRX2 142 aa11.81□□□□□ -0.52
COL6A1-206ENST00000498614 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
COL6A1-206ENST00000498614 GAGE7O76087 117 aa11.81□□□□□ -0.52
COL6A1-206ENST00000498614 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
COL6A1-206ENST00000498614 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
COL6A1-206ENST00000498614 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
COL6A1-206ENST00000498614 GAGE4Q13068 117 aa11.81□□□□□ -0.52
COL6A1-206ENST00000498614 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.8□□□□□ -0.52
COL6A1-206ENST00000498614 TIMM17BO60830 172 aa11.79□□□□□ -0.52
COL6A1-206ENST00000498614 C11orf72Q8NBR9 251 aa11.79□□□□□ -0.52
COL6A1-206ENST00000498614 MAST4O15021 2626 aa11.79□□□□□ -0.52
COL6A1-206ENST00000498614 DNAJC9-AS1A6NH13 148 aa11.79□□□□□ -0.52
COL6A1-206ENST00000498614 INSP01308 110 aa11.78□□□□□ -0.52
COL6A1-206ENST00000498614 TMEM101Q96IK0 257 aa11.78□□□□□ -0.52
COL6A1-206ENST00000498614 CITED2Q99967 270 aaPredicted RBP11.78□□□□□ -0.52
COL6A1-206ENST00000498614 XCL2Q9UBD3 114 aa11.78□□□□□ -0.52
COL6A1-206ENST00000498614 JMJD1CQ15652 2540 aa11.78□□□□□ -0.52
COL6A1-206ENST00000498614 NDUFA1O15239 70 aa11.78□□□□□ -0.52
COL6A1-206ENST00000498614 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
COL6A1-206ENST00000498614 COX6A2Q02221 97 aa11.77□□□□□ -0.52
COL6A1-206ENST00000498614 WNK1Q9H4A3 2382 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms