RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SDHAF1A6NFY7 115 aa7.01□□□□□ -1.29
CDK9-205ENST00000498339 BCL2L11O43521 198 aa7.01□□□□□ -1.29
CDK9-205ENST00000498339 TSPAN13O95857 204 aa7.01□□□□□ -1.29
CDK9-205ENST00000498339 SMIM15Q7Z3B0 74 aa7.01□□□□□ -1.29
CDK9-205ENST00000498339 FAM19A5Q7Z5A7 132 aaPredicted RBP7.01□□□□□ -1.29
CDK9-205ENST00000498339 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
CDK9-205ENST00000498339 I3L3M4 83 aa7□□□□□ -1.29
CDK9-205ENST00000498339 ARPC5O15511 151 aa7□□□□□ -1.29
CDK9-205ENST00000498339 CTRLP40313 264 aa7□□□□□ -1.29
CDK9-205ENST00000498339 GNG4P50150 75 aa7□□□□□ -1.29
CDK9-205ENST00000498339 KRTAP1-4P0C5Y4 121 aa6.99□□□□□ -1.29
CDK9-205ENST00000498339 UBE2BP63146 152 aa6.99□□□□□ -1.29
CDK9-205ENST00000498339 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
CDK9-205ENST00000498339 MBD3L1Q8WWY6 194 aa6.99□□□□□ -1.29
CDK9-205ENST00000498339 TMEM242Q9NWH2 141 aa6.99□□□□□ -1.29
CDK9-205ENST00000498339 GNG13Q9P2W3 67 aa6.99□□□□□ -1.29
CDK9-205ENST00000498339 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
CDK9-205ENST00000498339 RAB19A4D1S5 217 aa6.98□□□□□ -1.29
CDK9-205ENST00000498339 H2AFB1P0C5Y9 115 aa6.98□□□□□ -1.29
CDK9-205ENST00000498339 C9orf62Q8N4C0 152 aa6.98□□□□□ -1.29
CDK9-205ENST00000498339 C11orf52Q96A22 123 aa6.98□□□□□ -1.29
CDK9-205ENST00000498339 C2orf48Q96LS8 159 aa6.98□□□□□ -1.29
CDK9-205ENST00000498339 CYTL1Q9NRR1 136 aa6.98□□□□□ -1.29
CDK9-205ENST00000498339 CDC42SE2Q9NRR3 84 aa6.98□□□□□ -1.29
CDK9-205ENST00000498339 C1orf196B1AJZ1 125 aa6.97□□□□□ -1.29
CDK9-205ENST00000498339 UMAD1C9J7I0 102 aa6.97□□□□□ -1.29
CDK9-205ENST00000498339 TEX261Q6UWH6 196 aa6.97□□□□□ -1.29
CDK9-205ENST00000498339 C5orf38Q86SI9 138 aa6.97□□□□□ -1.29
CDK9-205ENST00000498339 KRTAP11-1Q8IUC1 163 aa6.97□□□□□ -1.29
CDK9-205ENST00000498339 MANBALQ9NQG1 85 aa6.97□□□□□ -1.29
CDK9-205ENST00000498339 BIN3Q9NQY0 253 aa6.97□□□□□ -1.29
CDK9-205ENST00000498339 TRAV13-1A0A0B4J241 112 aa6.96□□□□□ -1.3
CDK9-205ENST00000498339 C7orf77A4D0Y5 90 aa6.96□□□□□ -1.3
CDK9-205ENST00000498339 TSHBP01222 138 aa6.96□□□□□ -1.3
CDK9-205ENST00000498339 ESDP10768 282 aa6.96□□□□□ -1.3
CDK9-205ENST00000498339 CCL20P78556 96 aa6.96□□□□□ -1.3
CDK9-205ENST00000498339 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
CDK9-205ENST00000498339 SMIM12Q96EX1 92 aa6.96□□□□□ -1.3
CDK9-205ENST00000498339 ST20Q9HBF5 79 aa6.96□□□□□ -1.3
CDK9-205ENST00000498339 M0QXV9 152 aa6.95□□□□□ -1.3
CDK9-205ENST00000498339 FOXA3P55318 350 aaPredicted RBP6.95□□□□□ -1.3
CDK9-205ENST00000498339 RNF151Q2KHN1 245 aa6.95□□□□□ -1.3
CDK9-205ENST00000498339 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
CDK9-205ENST00000498339 IMMP2LQ96T52 175 aa6.95□□□□□ -1.3
CDK9-205ENST00000498339 CNFNQ9BYD5 112 aa6.95□□□□□ -1.3
CDK9-205ENST00000498339 RPP21Q9H633 154 aaKnown RBP6.95□□□□□ -1.3
CDK9-205ENST00000498339 GAGE2EQ4V326 116 aa6.94□□□□□ -1.3
CDK9-205ENST00000498339 NUDT10Q8NFP7 164 aa6.94□□□□□ -1.3
CDK9-205ENST00000498339 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
CDK9-205ENST00000498339 NUDT11Q96G61 164 aa6.94□□□□□ -1.3
CDK9-205ENST00000498339 GAGE2DQ9UEU5 116 aa6.94□□□□□ -1.3
CDK9-205ENST00000498339 CARHSP1Q9Y2V2 147 aaKnown RBP6.94□□□□□ -1.3
CDK9-205ENST00000498339 G3V3Q6 166 aa6.93□□□□□ -1.3
CDK9-205ENST00000498339 NDUFA1O15239 70 aa6.93□□□□□ -1.3
CDK9-205ENST00000498339 FCER1GP30273 86 aa6.93□□□□□ -1.3
CDK9-205ENST00000498339 SMAGPQ0VAQ4 97 aa6.93□□□□□ -1.3
CDK9-205ENST00000498339 OR10D4PQ8NGN7 298 aa6.93□□□□□ -1.3
CDK9-205ENST00000498339 RNASE7Q9H1E1 156 aaKnown RBP6.93□□□□□ -1.3
CDK9-205ENST00000498339 MED9Q9NWA0 146 aa6.93□□□□□ -1.3
CDK9-205ENST00000498339 MRPL35Q9NZE8 188 aaKnown RBP6.93□□□□□ -1.3
CDK9-205ENST00000498339 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
CDK9-205ENST00000498339 MUC17Q685J3 4493 aa6.92□□□□□ -1.3
CDK9-205ENST00000498339 TRBV6-5A0A0K0K1A5 114 aa6.92□□□□□ -1.3
CDK9-205ENST00000498339 TRBV20OR9-2A0A075B6H5 130 aa6.91□□□□□ -1.3
CDK9-205ENST00000498339 PDE6DO43924 150 aa6.91□□□□□ -1.3
CDK9-205ENST00000498339 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
CDK9-205ENST00000498339 KANTRA0A1W2PQU2 76 aa6.9□□□□□ -1.3
CDK9-205ENST00000498339 SMLR1H3BR10 107 aa6.9□□□□□ -1.3
CDK9-205ENST00000498339 TEX46H3BTG2 121 aa6.9□□□□□ -1.3
CDK9-205ENST00000498339 Q6ZUT4 128 aa6.9□□□□□ -1.3
CDK9-205ENST00000498339 TYMSOSQ8TAI1 123 aa6.9□□□□□ -1.3
CDK9-205ENST00000498339 BORCS7Q96B45 105 aa6.9□□□□□ -1.3
CDK9-205ENST00000498339 FAM210AQ96ND0 272 aa6.9□□□□□ -1.3
CDK9-205ENST00000498339 UBE2D4Q9Y2X8 147 aa6.9□□□□□ -1.3
CDK9-205ENST00000498339 TRBV27A0A0K0K1C4 114 aa6.89□□□□□ -1.31
CDK9-205ENST00000498339 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
CDK9-205ENST00000498339 RETNLBQ9BQ08 111 aa6.89□□□□□ -1.31
CDK9-205ENST00000498339 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
CDK9-205ENST00000498339 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
CDK9-205ENST00000498339 F8WDY8 70 aa6.88□□□□□ -1.31
CDK9-205ENST00000498339 ZNF861PO60384 105 aa6.88□□□□□ -1.31
CDK9-205ENST00000498339 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
CDK9-205ENST00000498339 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
CDK9-205ENST00000498339 UNQ6190/PRO20217Q6UXQ8 127 aa6.88□□□□□ -1.31
CDK9-205ENST00000498339 A0A087X002 238 aa6.87□□□□□ -1.31
CDK9-205ENST00000498339 K7EN84 100 aa6.87□□□□□ -1.31
CDK9-205ENST00000498339 POLR2KP53803 58 aaKnown RBP6.87□□□□□ -1.31
CDK9-205ENST00000498339 ZNF345Q14585 488 aa6.87□□□□□ -1.31
CDK9-205ENST00000498339 KIR2DL4Q99706 377 aa6.87□□□□□ -1.31
CDK9-205ENST00000498339 CSDC2Q9Y534 153 aaKnown RBP6.87□□□□□ -1.31
CDK9-205ENST00000498339 VCYO14598 125 aa6.86□□□□□ -1.31
CDK9-205ENST00000498339 GATCO43716 136 aaKnown RBP6.86□□□□□ -1.31
CDK9-205ENST00000498339 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
CDK9-205ENST00000498339 TMEM18Q96B42 140 aa6.86□□□□□ -1.31
CDK9-205ENST00000498339 A8MWL6 223 aa6.85□□□□□ -1.31
CDK9-205ENST00000498339 SMKR1H3BMG3 65 aa6.85□□□□□ -1.31
CDK9-205ENST00000498339 NUPR1O60356 82 aa6.85□□□□□ -1.31
CDK9-205ENST00000498339 CRYGAP11844 174 aa6.85□□□□□ -1.31
CDK9-205ENST00000498339 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
CDK9-205ENST00000498339 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms