RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 KMT2AQ03164 3969 aa9.18□□□□□ -0.94
CPNE1-227ENST00000498056 RNASE13Q5GAN3 156 aaKnown RBP9.18□□□□□ -0.94
CPNE1-227ENST00000498056 MRPL52Q86TS9 123 aaKnown RBP9.18□□□□□ -0.94
CPNE1-227ENST00000498056 A0A1B0GUV1 79 aa9.17□□□□□ -0.94
CPNE1-227ENST00000498056 G0S2P27469 103 aa9.17□□□□□ -0.94
CPNE1-227ENST00000498056 LINC00310P59036 64 aa9.17□□□□□ -0.94
CPNE1-227ENST00000498056 UBE2WQ96B02 151 aa9.17□□□□□ -0.94
CPNE1-227ENST00000498056 TOMM6Q96B49 74 aa9.17□□□□□ -0.94
CPNE1-227ENST00000498056 A0A096LNJ9 63 aa9.16□□□□□ -0.94
CPNE1-227ENST00000498056 LINC00269Q8N2A0 174 aa9.16□□□□□ -0.94
CPNE1-227ENST00000498056 TIMM21Q9BVV7 248 aa9.16□□□□□ -0.94
CPNE1-227ENST00000498056 K7EP13 123 aa9.15□□□□□ -0.94
CPNE1-227ENST00000498056 NDUFA6P56556 154 aa9.15□□□□□ -0.94
CPNE1-227ENST00000498056 REG3AQ06141 175 aa9.15□□□□□ -0.94
CPNE1-227ENST00000498056 Q6ZR54 194 aa9.15□□□□□ -0.94
CPNE1-227ENST00000498056 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
CPNE1-227ENST00000498056 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
CPNE1-227ENST00000498056 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
CPNE1-227ENST00000498056 Q6ZN92 141 aa9.14□□□□□ -0.95
CPNE1-227ENST00000498056 FAM19A2Q8N3H0 131 aa9.14□□□□□ -0.95
CPNE1-227ENST00000498056 ZNF664Q8N3J9 261 aa9.14□□□□□ -0.95
CPNE1-227ENST00000498056 OPRPNQ99935 248 aaPredicted RBP9.14□□□□□ -0.95
CPNE1-227ENST00000498056 CDC42SE2Q9NRR3 84 aa9.14□□□□□ -0.95
CPNE1-227ENST00000498056 CSDC2Q9Y534 153 aaKnown RBP9.14□□□□□ -0.95
CPNE1-227ENST00000498056 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
CPNE1-227ENST00000498056 IFITM10A6NMD0 228 aa9.13□□□□□ -0.95
CPNE1-227ENST00000498056 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
CPNE1-227ENST00000498056 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
CPNE1-227ENST00000498056 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
CPNE1-227ENST00000498056 IGLV10-54A0A075B6I4 117 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 IGKV2D-24A0A075B6R9 120 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 TRAV8-3A0A0A6YYJ7 113 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 NUPR1O60356 82 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 MRPS36P82909 103 aaKnown RBP9.12□□□□□ -0.95
CPNE1-227ENST00000498056 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 ERASQ7Z444 233 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 C6orf223Q8N319 242 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 C1orf43Q9BWL3 253 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 PRR34Q9NV39 138 aa9.12□□□□□ -0.95
CPNE1-227ENST00000498056 IGIPA6NJ69 53 aa9.11□□□□□ -0.95
CPNE1-227ENST00000498056 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.11□□□□□ -0.95
CPNE1-227ENST00000498056 MIAQ16674 131 aa9.11□□□□□ -0.95
CPNE1-227ENST00000498056 PDZD11Q5EBL8 140 aa9.11□□□□□ -0.95
CPNE1-227ENST00000498056 PAPPA-AS1Q5QFB9 102 aa9.11□□□□□ -0.95
CPNE1-227ENST00000498056 C1orf134Q5TEV5 83 aa9.11□□□□□ -0.95
CPNE1-227ENST00000498056 RMI2Q96E14 147 aa9.11□□□□□ -0.95
CPNE1-227ENST00000498056 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
CPNE1-227ENST00000498056 DNAH10Q8IVF4 4471 aa9.1□□□□□ -0.95
CPNE1-227ENST00000498056 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
CPNE1-227ENST00000498056 PSCAO43653 123 aa9.1□□□□□ -0.95
CPNE1-227ENST00000498056 S100A6P06703 90 aa9.1□□□□□ -0.95
CPNE1-227ENST00000498056 ZC2HC1BQ5TFG8 222 aa9.1□□□□□ -0.95
CPNE1-227ENST00000498056 ATP5LO75964 103 aa9.09□□□□□ -0.95
CPNE1-227ENST00000498056 LEPROTL1O95214 131 aa9.09□□□□□ -0.95
CPNE1-227ENST00000498056 NPSP0C0P6 89 aa9.09□□□□□ -0.95
CPNE1-227ENST00000498056 FABP4P15090 132 aa9.09□□□□□ -0.95
CPNE1-227ENST00000498056 COA6Q5JTJ3 125 aaKnown RBP9.09□□□□□ -0.95
CPNE1-227ENST00000498056 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
CPNE1-227ENST00000498056 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
CPNE1-227ENST00000498056 FAM104AQ969W3 186 aa9.09□□□□□ -0.95
CPNE1-227ENST00000498056 VCX2Q9H322 139 aa9.09□□□□□ -0.95
CPNE1-227ENST00000498056 TMA7Q9Y2S6 64 aaKnown RBP9.09□□□□□ -0.95
CPNE1-227ENST00000498056 LINC00959A0A1B0GUT2 108 aa9.08□□□□□ -0.96
CPNE1-227ENST00000498056 SS18Q15532 418 aa9.08□□□□□ -0.96
CPNE1-227ENST00000498056 BAALCQ8WXS3 180 aa9.08□□□□□ -0.96
CPNE1-227ENST00000498056 IFI27L1Q96BM0 104 aa9.08□□□□□ -0.96
CPNE1-227ENST00000498056 DNAH2Q9P225 4427 aa9.08□□□□□ -0.96
CPNE1-227ENST00000498056 FRAS1Q86XX4 4008 aa9.08□□□□□ -0.96
CPNE1-227ENST00000498056 RYR3Q15413 4870 aa9.07□□□□□ -0.96
CPNE1-227ENST00000498056 H0Y8G0 127 aa9.07□□□□□ -0.96
CPNE1-227ENST00000498056 CCL25O15444 150 aa9.07□□□□□ -0.96
CPNE1-227ENST00000498056 XCL1P47992 114 aa9.07□□□□□ -0.96
CPNE1-227ENST00000498056 CHCHD10Q8WYQ3 142 aaPredicted RBP9.07□□□□□ -0.96
CPNE1-227ENST00000498056 HSPB8Q9UJY1 196 aa9.07□□□□□ -0.96
CPNE1-227ENST00000498056 TRAV8-4A0A0B4J246 113 aa9.06□□□□□ -0.96
CPNE1-227ENST00000498056 AMELXQ99217 191 aa9.06□□□□□ -0.96
CPNE1-227ENST00000498056 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
CPNE1-227ENST00000498056 GAGE12HA6NDE8 117 aa9.05□□□□□ -0.96
CPNE1-227ENST00000498056 S100A2P29034 98 aa9.05□□□□□ -0.96
CPNE1-227ENST00000498056 PMVKQ15126 192 aa9.05□□□□□ -0.96
CPNE1-227ENST00000498056 Q6ZRN7 208 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-227ENST00000498056 COX11Q9Y6N1 276 aa9.05□□□□□ -0.96
CPNE1-227ENST00000498056 PRSS1P07477 247 aa9.04□□□□□ -0.96
CPNE1-227ENST00000498056 UBE2D1P51668 147 aa9.04□□□□□ -0.96
CPNE1-227ENST00000498056 RTL8CO15255 209 aa9.03□□□□□ -0.96
CPNE1-227ENST00000498056 HIST3H2BBQ8N257 126 aa9.03□□□□□ -0.96
CPNE1-227ENST00000498056 CST9LQ9H4G1 147 aa9.03□□□□□ -0.96
CPNE1-227ENST00000498056 DNAH17Q9UFH2 4485 aa9.03□□□□□ -0.96
CPNE1-227ENST00000498056 PRSS29PA6NIE9 313 aa9.02□□□□□ -0.97
CPNE1-227ENST00000498056 LECT2O14960 151 aa9.02□□□□□ -0.97
CPNE1-227ENST00000498056 SNRPEP62304 92 aaKnown RBP9.02□□□□□ -0.97
CPNE1-227ENST00000498056 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.97
CPNE1-227ENST00000498056 MAP1LC3CQ9BXW4 147 aa9.02□□□□□ -0.97
CPNE1-227ENST00000498056 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
CPNE1-227ENST00000498056 FOXI1Q12951 378 aa9.01□□□□□ -0.97
CPNE1-227ENST00000498056 LINC00242Q5T6M2 205 aa9.01□□□□□ -0.97
CPNE1-227ENST00000498056 KRTAP26-1Q6PEX3 210 aa9.01□□□□□ -0.97
CPNE1-227ENST00000498056 CD164L2Q6UWJ8 174 aa9.01□□□□□ -0.97
CPNE1-227ENST00000498056 CHAC1Q9BUX1 264 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms