RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 TIMM21Q9BVV7 248 aa13.12□□□□□ -0.31
HLA-DPB1-217ENST00000498038 CDC42SE2Q9NRR3 84 aa13.12□□□□□ -0.31
HLA-DPB1-217ENST00000498038 C1orf43Q9BWL3 253 aa13.11□□□□□ -0.31
HLA-DPB1-217ENST00000498038 CSDC2Q9Y534 153 aaKnown RBP13.11□□□□□ -0.31
HLA-DPB1-217ENST00000498038 COX11Q9Y6N1 276 aa13.11□□□□□ -0.31
HLA-DPB1-217ENST00000498038 DNAH2Q9P225 4427 aa13.1□□□□□ -0.31
HLA-DPB1-217ENST00000498038 C2orf66Q6UXQ4 117 aa13.1□□□□□ -0.31
HLA-DPB1-217ENST00000498038 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
HLA-DPB1-217ENST00000498038 CYSLTR1Q9Y271 337 aa13.1□□□□□ -0.31
HLA-DPB1-217ENST00000498038 IGLV10-54A0A075B6I4 117 aa13.09□□□□□ -0.31
HLA-DPB1-217ENST00000498038 LINC01546A6NGU7 62 aa13.09□□□□□ -0.31
HLA-DPB1-217ENST00000498038 G0S2P27469 103 aa13.09□□□□□ -0.31
HLA-DPB1-217ENST00000498038 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.32
HLA-DPB1-217ENST00000498038 LINC00614P0C842 121 aa13.08□□□□□ -0.32
HLA-DPB1-217ENST00000498038 RNASE13Q5GAN3 156 aaKnown RBP13.08□□□□□ -0.32
HLA-DPB1-217ENST00000498038 RAB5BP61020 215 aa13.07□□□□□ -0.32
HLA-DPB1-217ENST00000498038 Q6ZUT4 128 aa13.07□□□□□ -0.32
HLA-DPB1-217ENST00000498038 URB1-AS1Q96HZ7 61 aa13.07□□□□□ -0.32
HLA-DPB1-217ENST00000498038 OPRPNQ99935 248 aaPredicted RBP13.07□□□□□ -0.32
HLA-DPB1-217ENST00000498038 AP5S1Q9NUS5 200 aa13.07□□□□□ -0.32
HLA-DPB1-217ENST00000498038 FRAS1Q86XX4 4008 aa13.07□□□□□ -0.32
HLA-DPB1-217ENST00000498038 PYGO1Q9Y3Y4 419 aa13.06□□□□□ -0.32
HLA-DPB1-217ENST00000498038 MRPS36P82909 103 aaKnown RBP13.05□□□□□ -0.32
HLA-DPB1-217ENST00000498038 MAPKAPK5-AS1Q8N8E1 139 aa13.05□□□□□ -0.32
HLA-DPB1-217ENST00000498038 TOMM6Q96B49 74 aa13.05□□□□□ -0.32
HLA-DPB1-217ENST00000498038 DNAH10Q8IVF4 4471 aa13.05□□□□□ -0.32
HLA-DPB1-217ENST00000498038 LINC00959A0A1B0GUT2 108 aa13.04□□□□□ -0.32
HLA-DPB1-217ENST00000498038 FAM104AQ969W3 186 aa13.04□□□□□ -0.32
HLA-DPB1-217ENST00000498038 A0A087WTM6 91 aa13.03□□□□□ -0.32
HLA-DPB1-217ENST00000498038 EREGO14944 169 aa13.03□□□□□ -0.32
HLA-DPB1-217ENST00000498038 SS18Q15532 418 aa13.03□□□□□ -0.32
HLA-DPB1-217ENST00000498038 BAGE3Q86Y29 109 aa13.03□□□□□ -0.32
HLA-DPB1-217ENST00000498038 BAALCQ8WXS3 180 aa13.03□□□□□ -0.32
HLA-DPB1-217ENST00000498038 IGLV4-3A0A075B6K6 122 aa13.02□□□□□ -0.33
HLA-DPB1-217ENST00000498038 LRCOL1A6NCL2 159 aa13.02□□□□□ -0.33
HLA-DPB1-217ENST00000498038 KRTAP26-1Q6PEX3 210 aa13.02□□□□□ -0.33
HLA-DPB1-217ENST00000498038 CHCHD10Q8WYQ3 142 aaPredicted RBP13.02□□□□□ -0.33
HLA-DPB1-217ENST00000498038 TMEM141Q96I45 108 aa13.02□□□□□ -0.33
HLA-DPB1-217ENST00000498038 SCGB3A1Q96QR1 104 aa13.02□□□□□ -0.33
HLA-DPB1-217ENST00000498038 TRAV13-1A0A0B4J241 112 aa13.01□□□□□ -0.33
HLA-DPB1-217ENST00000498038 GAGE12HA6NDE8 117 aa13.01□□□□□ -0.33
HLA-DPB1-217ENST00000498038 LINC01549A6NIU2 74 aa13.01□□□□□ -0.33
HLA-DPB1-217ENST00000498038 IGIPA6NJ69 53 aa13.01□□□□□ -0.33
HLA-DPB1-217ENST00000498038 LECT2O14960 151 aa13.01□□□□□ -0.33
HLA-DPB1-217ENST00000498038 CHCHD1Q96BP2 118 aaKnown RBP13.01□□□□□ -0.33
HLA-DPB1-217ENST00000498038 A0A1B0GVY2 172 aa13□□□□□ -0.33
HLA-DPB1-217ENST00000498038 CCL25O15444 150 aa13□□□□□ -0.33
HLA-DPB1-217ENST00000498038 PMCHL1Q16048 86 aa13□□□□□ -0.33
HLA-DPB1-217ENST00000498038 Q6ZN92 141 aa13□□□□□ -0.33
HLA-DPB1-217ENST00000498038 ERASQ7Z444 233 aa13□□□□□ -0.33
HLA-DPB1-217ENST00000498038 DNAH17Q9UFH2 4485 aa13□□□□□ -0.33
HLA-DPB1-217ENST00000498038 IFITM10A6NMD0 228 aa12.99□□□□□ -0.33
HLA-DPB1-217ENST00000498038 C1orf196B1AJZ1 125 aa12.99□□□□□ -0.33
HLA-DPB1-217ENST00000498038 NPSP0C0P6 89 aa12.99□□□□□ -0.33
HLA-DPB1-217ENST00000498038 XCL1P47992 114 aa12.99□□□□□ -0.33
HLA-DPB1-217ENST00000498038 TIMM17AQ99595 171 aa12.99□□□□□ -0.33
HLA-DPB1-217ENST00000498038 VCX2Q9H322 139 aa12.99□□□□□ -0.33
HLA-DPB1-217ENST00000498038 WFDC2Q14508 124 aa12.98□□□□□ -0.33
HLA-DPB1-217ENST00000498038 TEX43Q6ZNM6 134 aa12.98□□□□□ -0.33
HLA-DPB1-217ENST00000498038 A0A096LNJ9 63 aa12.97□□□□□ -0.33
HLA-DPB1-217ENST00000498038 HBDP02042 147 aa12.97□□□□□ -0.33
HLA-DPB1-217ENST00000498038 PAPPA-AS1Q5QFB9 102 aa12.97□□□□□ -0.33
HLA-DPB1-217ENST00000498038 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
HLA-DPB1-217ENST00000498038 SPATA12Q7Z6I5 190 aa12.96□□□□□ -0.33
HLA-DPB1-217ENST00000498038 C2orf88Q9BSF0 95 aa12.96□□□□□ -0.33
HLA-DPB1-217ENST00000498038 FAT2Q9NYQ8 4349 aa12.96□□□□□ -0.33
HLA-DPB1-217ENST00000498038 USP17L23D6RBM5 183 aa12.95□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HSBP1O75506 76 aa12.95□□□□□ -0.34
HLA-DPB1-217ENST00000498038 FOXI1Q12951 378 aa12.95□□□□□ -0.34
HLA-DPB1-217ENST00000498038 CD164L2Q6UWJ8 174 aa12.95□□□□□ -0.34
HLA-DPB1-217ENST00000498038 Q8N814 137 aa12.95□□□□□ -0.34
HLA-DPB1-217ENST00000498038 AMELXQ99217 191 aa12.95□□□□□ -0.34
HLA-DPB1-217ENST00000498038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BKO60814 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 SERF1AO75920 110 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BJP06899 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BOP23527 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BBP33778 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BDP58876 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BCP62807 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST2H2BEQ16778 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BHQ93079 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BNQ99877 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 HIST1H2BMQ99879 126 aa12.94□□□□□ -0.34
HLA-DPB1-217ENST00000498038 KRTAP10-2P60368 255 aa12.93□□□□□ -0.34
HLA-DPB1-217ENST00000498038 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
HLA-DPB1-217ENST00000498038 LINC00173Q6ZV60 143 aa12.93□□□□□ -0.34
HLA-DPB1-217ENST00000498038 FAM19A2Q8N3H0 131 aa12.93□□□□□ -0.34
HLA-DPB1-217ENST00000498038 FUSP35637 526 aaKnown RBP eCLIP12.92□□□□□ -0.34
HLA-DPB1-217ENST00000498038 LINC00310P59036 64 aa12.92□□□□□ -0.34
HLA-DPB1-217ENST00000498038 NUPR1O60356 82 aa12.91□□□□□ -0.34
HLA-DPB1-217ENST00000498038 UBE2D1P51668 147 aa12.91□□□□□ -0.34
HLA-DPB1-217ENST00000498038 C14orf177Q52M58 125 aa12.91□□□□□ -0.34
HLA-DPB1-217ENST00000498038 PGPEP1Q9NXJ5 209 aa12.91□□□□□ -0.34
HLA-DPB1-217ENST00000498038 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.9□□□□□ -0.34
HLA-DPB1-217ENST00000498038 ATP5LO75964 103 aa12.9□□□□□ -0.34
HLA-DPB1-217ENST00000498038 CFAP161Q6P656 301 aa12.9□□□□□ -0.34
HLA-DPB1-217ENST00000498038 BIRC6Q9NR09 4857 aa12.9□□□□□ -0.34
HLA-DPB1-217ENST00000498038 EPPK1P58107 5090 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms