RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 HERV-K104P63124 156 aa5.98□□□□□ -1.45
HLA-DMB-262ENST00000498020 PRR9Q5T870 116 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 Q9H8V8 135 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 C5orf38Q86SI9 138 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 ZNF702PQ9H963 129 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 ICOSQ9Y6W8 199 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 IGKV2-29A2NJV5 120 aaPredicted RBP5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 GYPEP15421 78 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 CEND1Q8N111 149 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 RPL39LQ96EH5 51 aaKnown RBP5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 CARD19Q96LW7 228 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 WFDC10AQ9H1F0 79 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 SPANXCQ9NY87 97 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 CRYBG3Q68DQ2 2970 aa5.97□□□□□ -1.45
HLA-DMB-262ENST00000498020 KALRNO60229 2985 aa5.96□□□□□ -1.45
HLA-DMB-262ENST00000498020 ODF1Q14990 250 aa5.96□□□□□ -1.45
HLA-DMB-262ENST00000498020 Q6ZQT7 251 aa5.96□□□□□ -1.45
HLA-DMB-262ENST00000498020 SPATA3Q8NHX4 192 aa5.96□□□□□ -1.45
HLA-DMB-262ENST00000498020 DCANP1Q8TF63 244 aa5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 KLLNB2CW77 178 aa5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 IFITM1P13164 125 aa5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 C9orf153Q5TBE3 101 aa5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 IGHV4-30-4P0DP06 118 aa5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 DAZ2Q13117 558 aaKnown RBP5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 DAZ4Q86SG3 579 aaKnown RBP5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 DAZ3Q9NR90 486 aaKnown RBP5.96□□□□□ -1.46
HLA-DMB-262ENST00000498020 CFC1BP0CG36 223 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 CFC1P0CG37 223 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 RETNQ9HD89 108 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 IGHV3-30P01768 117 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 IGHV3-33P01772 117 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 IGHV3-30-3P0DP02 117 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 IGHV3-30-5P0DP03 117 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 Q8N1Y9 231 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 ITPR1Q14643 2758 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 TRAV12-1A0A0B4J245 112 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 TRAV4A0A0B4J268 109 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 A0A1W2PPM0 123 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 K7EP13 123 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 K7EP34 96 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 PCP2Q8IVA1 136 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 NRACQ8N912 160 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 ASPMQ8IZT6 3477 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 MUC4Q99102 2169 aa5.95□□□□□ -1.46
HLA-DMB-262ENST00000498020 COX7A2LO14548 114 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 K7EQD1 137 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 NPSP0C0P6 89 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 TOMM6Q96B49 74 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 hADV29S1A0JD25 119 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 RNASE3P12724 160 aaKnown RBP5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 C12orf74Q32Q52 190 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 TINCRA0A1B0GVN0 87 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 H3BMG7 143 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 GAS8-AS1O95177 125 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 NDUFA7O95182 113 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 AMTNQ6UX39 209 aa5.94□□□□□ -1.46
HLA-DMB-262ENST00000498020 A0A096LNJ9 63 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 A0A0J9YXV3 536 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 LRCOL1A6NCL2 159 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 LAMA5O15230 3695 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 FUSP35637 526 aaKnown RBP eCLIP5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 CITED1Q99966 193 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 ORMDL1Q9P0S3 153 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 MDFICQ9P1T7 246 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 IGLV10-54A0A075B6I4 117 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 ZFP2Q6ZN57 461 aa5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 NTN5Q8WTR8 489 aaPredicted RBP5.93□□□□□ -1.46
HLA-DMB-262ENST00000498020 H0YGX0 51 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 TRBV7-3A0A075B6L6 115 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 Q6ZVH6 145 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 SND1-IT1Q9HBX3 110 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 HIGD1BQ9P298 99 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 WDFY3Q8IZQ1 3526 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 TM2D2Q9BX73 214 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 RPL18AQ02543 176 aaKnown RBP5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 ANKRD29Q8N6D5 301 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 NBEAQ8NFP9 2946 aa5.92□□□□□ -1.46
HLA-DMB-262ENST00000498020 A0A0J9YWU9 116 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 K7ERJ3 54 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 BAALC-AS2P0C853 105 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 KMT2BQ9UMN6 2715 aaPredicted RBP5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 EDN2P20800 178 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 OPRPNQ99935 248 aaPredicted RBP5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 HHLA3Q9XRX5 114 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 NDUFA1O15239 70 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 DEFB114Q30KQ6 69 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 TIMM17AQ99595 171 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 CRYBA4P53673 196 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 TIRAPP58753 221 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 NANOS2P60321 138 aaKnown RBP5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 DEFB105AQ8NG35 78 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 BAALCQ8WXS3 180 aa5.91□□□□□ -1.46
HLA-DMB-262ENST00000498020 TAX1BP3O14907 124 aa5.9□□□□□ -1.46
HLA-DMB-262ENST00000498020 FAM19A4Q96LR4 140 aa5.9□□□□□ -1.46
HLA-DMB-262ENST00000498020 C9orf85Q96MD7 179 aa5.9□□□□□ -1.46
HLA-DMB-262ENST00000498020 MAP6D1Q9H9H5 199 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms