RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ANGP03950 147 aaKnown RBP10.15□□□□□ -0.78
NUP50-219ENST00000497960 WFDC2Q14508 124 aa10.15□□□□□ -0.78
NUP50-219ENST00000497960 AMMECR1LQ6DCA0 310 aa10.15□□□□□ -0.78
NUP50-219ENST00000497960 BAALCQ8WXS3 180 aa10.15□□□□□ -0.78
NUP50-219ENST00000497960 ALKBH7Q9BT30 221 aaPredicted RBP10.15□□□□□ -0.78
NUP50-219ENST00000497960 APOBP04114 4563 aaKnown RBP10.14□□□□□ -0.79
NUP50-219ENST00000497960 RAB5AP20339 215 aa10.14□□□□□ -0.79
NUP50-219ENST00000497960 XGP55808 180 aa10.14□□□□□ -0.79
NUP50-219ENST00000497960 Q8N8P6 123 aa10.14□□□□□ -0.79
NUP50-219ENST00000497960 Q8N976 141 aa10.14□□□□□ -0.79
NUP50-219ENST00000497960 C1orf43Q9BWL3 253 aa10.14□□□□□ -0.79
NUP50-219ENST00000497960 PRSS47A8MTI9 375 aa10.13□□□□□ -0.79
NUP50-219ENST00000497960 H7C423 109 aa10.13□□□□□ -0.79
NUP50-219ENST00000497960 ESDP10768 282 aa10.13□□□□□ -0.79
NUP50-219ENST00000497960 RBX1P62877 108 aa10.13□□□□□ -0.79
NUP50-219ENST00000497960 RNASEKQ6P5S7 137 aaKnown RBP10.13□□□□□ -0.79
NUP50-219ENST00000497960 TMEM18Q96B42 140 aa10.13□□□□□ -0.79
NUP50-219ENST00000497960 NXT2Q9NPJ8 142 aaKnown RBP10.13□□□□□ -0.79
NUP50-219ENST00000497960 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
NUP50-219ENST00000497960 COLCA2A8K830 154 aa10.11□□□□□ -0.79
NUP50-219ENST00000497960 EPM2AB3EWF7 344 aa10.11□□□□□ -0.79
NUP50-219ENST00000497960 FGF6P10767 208 aa10.11□□□□□ -0.79
NUP50-219ENST00000497960 IFI27P40305 119 aaPredicted RBP10.11□□□□□ -0.79
NUP50-219ENST00000497960 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
NUP50-219ENST00000497960 CLPSL2Q6UWE3 100 aa10.11□□□□□ -0.79
NUP50-219ENST00000497960 ENHOQ6UWT2 76 aa10.11□□□□□ -0.79
NUP50-219ENST00000497960 PRSS3P2Q8NHM4 247 aa10.11□□□□□ -0.79
NUP50-219ENST00000497960 ZNF25P17030 456 aaPredicted RBP10.1□□□□□ -0.79
NUP50-219ENST00000497960 MIAQ16674 131 aa10.1□□□□□ -0.79
NUP50-219ENST00000497960 C20orf203Q8NBC4 194 aa10.1□□□□□ -0.79
NUP50-219ENST00000497960 TMEM101Q96IK0 257 aa10.1□□□□□ -0.79
NUP50-219ENST00000497960 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 A0A1B0GUV1 79 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 K7EMI3 77 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 TRGC2P03986 189 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 C14orf177Q52M58 125 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 ORMDL2Q53FV1 153 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 FA2HQ7L5A8 372 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 OR5A1Q8NGJ0 315 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 C18orf32Q8TCD1 76 aa10.09□□□□□ -0.79
NUP50-219ENST00000497960 ABCA13Q86UQ4 5058 aa10.08□□□□□ -0.8
NUP50-219ENST00000497960 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
NUP50-219ENST00000497960 DGAT2L7PQ6IED9 249 aa10.08□□□□□ -0.8
NUP50-219ENST00000497960 MRPL52Q86TS9 123 aaKnown RBP10.08□□□□□ -0.8
NUP50-219ENST00000497960 LINC00269Q8N2A0 174 aa10.08□□□□□ -0.8
NUP50-219ENST00000497960 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
NUP50-219ENST00000497960 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
NUP50-219ENST00000497960 UBE2D4Q9Y2X8 147 aa10.07□□□□□ -0.8
NUP50-219ENST00000497960 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
NUP50-219ENST00000497960 REG3AQ06141 175 aa10.06□□□□□ -0.8
NUP50-219ENST00000497960 LCE2DQ5TA82 110 aaPredicted RBP10.06□□□□□ -0.8
NUP50-219ENST00000497960 SMR3BP02814 79 aaPredicted RBP10.05□□□□□ -0.8
NUP50-219ENST00000497960 HAMPP81172 84 aa10.05□□□□□ -0.8
NUP50-219ENST00000497960 C2orf66Q6UXQ4 117 aa10.05□□□□□ -0.8
NUP50-219ENST00000497960 Q6ZUT4 128 aa10.05□□□□□ -0.8
NUP50-219ENST00000497960 FAM30AQ9NZY2 134 aa10.05□□□□□ -0.8
NUP50-219ENST00000497960 RAB5BP61020 215 aa10.04□□□□□ -0.8
NUP50-219ENST00000497960 Q5VSD8 79 aa10.04□□□□□ -0.8
NUP50-219ENST00000497960 TIMM21Q9BVV7 248 aa10.04□□□□□ -0.8
NUP50-219ENST00000497960 SPANXA1Q9NS26 97 aa10.04□□□□□ -0.8
NUP50-219ENST00000497960 AP5S1Q9NUS5 200 aa10.04□□□□□ -0.8
NUP50-219ENST00000497960 LINC01546A6NGU7 62 aa10.03□□□□□ -0.8
NUP50-219ENST00000497960 USP17L23D6RBM5 183 aa10.03□□□□□ -0.8
NUP50-219ENST00000497960 FAM229AH3BQW9 127 aa10.03□□□□□ -0.8
NUP50-219ENST00000497960 G0S2P27469 103 aa10.03□□□□□ -0.8
NUP50-219ENST00000497960 RNASE13Q5GAN3 156 aaKnown RBP10.03□□□□□ -0.8
NUP50-219ENST00000497960 ZNF664Q8N3J9 261 aa10.03□□□□□ -0.8
NUP50-219ENST00000497960 CSDC2Q9Y534 153 aaKnown RBP10.03□□□□□ -0.8
NUP50-219ENST00000497960 IGLV10-54A0A075B6I4 117 aa10.02□□□□□ -0.81
NUP50-219ENST00000497960 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.81
NUP50-219ENST00000497960 LINC01620Q4KN68 170 aa10.02□□□□□ -0.81
NUP50-219ENST00000497960 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
NUP50-219ENST00000497960 LINC00614P0C842 121 aa10.01□□□□□ -0.81
NUP50-219ENST00000497960 Q6ZSA8 131 aa10.01□□□□□ -0.81
NUP50-219ENST00000497960 BAGE3Q86Y29 109 aa10.01□□□□□ -0.81
NUP50-219ENST00000497960 URB1-AS1Q96HZ7 61 aa10.01□□□□□ -0.81
NUP50-219ENST00000497960 TOMM6Q96B49 74 aa10□□□□□ -0.81
NUP50-219ENST00000497960 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
NUP50-219ENST00000497960 IGLV4-3A0A075B6K6 122 aa9.99□□□□□ -0.81
NUP50-219ENST00000497960 LINC01549A6NIU2 74 aa9.99□□□□□ -0.81
NUP50-219ENST00000497960 INAFM2P0DMQ5 153 aa9.99□□□□□ -0.81
NUP50-219ENST00000497960 MRPS36P82909 103 aaKnown RBP9.99□□□□□ -0.81
NUP50-219ENST00000497960 PMCHL1Q16048 86 aa9.99□□□□□ -0.81
NUP50-219ENST00000497960 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
NUP50-219ENST00000497960 Q6ZN92 141 aa9.99□□□□□ -0.81
NUP50-219ENST00000497960 TMEM141Q96I45 108 aa9.99□□□□□ -0.81
NUP50-219ENST00000497960 OPRPNQ99935 248 aaPredicted RBP9.99□□□□□ -0.81
NUP50-219ENST00000497960 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
NUP50-219ENST00000497960 HBDP02042 147 aa9.98□□□□□ -0.81
NUP50-219ENST00000497960 CHCHD1Q96BP2 118 aaKnown RBP9.98□□□□□ -0.81
NUP50-219ENST00000497960 SCGB3A1Q96QR1 104 aa9.98□□□□□ -0.81
NUP50-219ENST00000497960 TRAV13-1A0A0B4J241 112 aa9.97□□□□□ -0.81
NUP50-219ENST00000497960 PRSS1P07477 247 aa9.97□□□□□ -0.81
NUP50-219ENST00000497960 SS18Q15532 418 aa9.97□□□□□ -0.81
NUP50-219ENST00000497960 TEX43Q6ZNM6 134 aa9.97□□□□□ -0.81
NUP50-219ENST00000497960 TIMM17AQ99595 171 aa9.97□□□□□ -0.81
NUP50-219ENST00000497960 FAT1Q14517 4588 aa9.96□□□□□ -0.81
NUP50-219ENST00000497960 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.82
NUP50-219ENST00000497960 HSBP1O75506 76 aa9.96□□□□□ -0.82
NUP50-219ENST00000497960 CHCHD10Q8WYQ3 142 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms