RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 UBE2E2Q96LR5 201 aa9.47□□□□□ -0.89
NXF3-207ENST00000497850 Q96MF0 132 aa9.47□□□□□ -0.89
NXF3-207ENST00000497850 NBPF19A0A087WUL8 3843 aa9.47□□□□□ -0.89
NXF3-207ENST00000497850 VCYO14598 125 aa9.47□□□□□ -0.89
NXF3-207ENST00000497850 UQCRQO14949 82 aa9.47□□□□□ -0.89
NXF3-207ENST00000497850 ZNF843Q8N446 348 aa9.47□□□□□ -0.89
NXF3-207ENST00000497850 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
NXF3-207ENST00000497850 KLK5Q9Y337 293 aaPredicted RBP9.47□□□□□ -0.89
NXF3-207ENST00000497850 SONP18583 2426 aaKnown RBP9.46□□□□□ -0.89
NXF3-207ENST00000497850 J3KT08 172 aa9.46□□□□□ -0.9
NXF3-207ENST00000497850 PRRC2AP48634 2157 aaKnown RBP9.46□□□□□ -0.9
NXF3-207ENST00000497850 MYO9AB2RTY4 2548 aa9.46□□□□□ -0.9
NXF3-207ENST00000497850 A0A1B0GX51 115 aa9.45□□□□□ -0.9
NXF3-207ENST00000497850 M0QY20 66 aa9.45□□□□□ -0.9
NXF3-207ENST00000497850 PROK1P58294 105 aa9.45□□□□□ -0.9
NXF3-207ENST00000497850 SMCR5Q8TEV8 140 aa9.45□□□□□ -0.9
NXF3-207ENST00000497850 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
NXF3-207ENST00000497850 UBR5O95071 2799 aaPredicted RBP9.45□□□□□ -0.9
NXF3-207ENST00000497850 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
NXF3-207ENST00000497850 DEFB113Q30KQ7 82 aa9.44□□□□□ -0.9
NXF3-207ENST00000497850 C11orf44Q8N8P7 122 aa9.44□□□□□ -0.9
NXF3-207ENST00000497850 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
NXF3-207ENST00000497850 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
NXF3-207ENST00000497850 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
NXF3-207ENST00000497850 Q6ZSV7 163 aa9.44□□□□□ -0.9
NXF3-207ENST00000497850 ACYP1P07311 99 aa9.43□□□□□ -0.9
NXF3-207ENST00000497850 COX6CP09669 75 aa9.43□□□□□ -0.9
NXF3-207ENST00000497850 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
NXF3-207ENST00000497850 TRBV27A0A0K0K1C4 114 aa9.43□□□□□ -0.9
NXF3-207ENST00000497850 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
NXF3-207ENST00000497850 SPXQ9BT56 116 aa9.43□□□□□ -0.9
NXF3-207ENST00000497850 SPANXDQ9BXN6 97 aa9.43□□□□□ -0.9
NXF3-207ENST00000497850 I3L3M4 83 aa9.42□□□□□ -0.9
NXF3-207ENST00000497850 HIST2H2BCQ6DN03 193 aa9.42□□□□□ -0.9
NXF3-207ENST00000497850 Q9UF83 564 aa9.42□□□□□ -0.9
NXF3-207ENST00000497850 ADAMTSL4-AS1Q5T5F5 129 aa9.42□□□□□ -0.9
NXF3-207ENST00000497850 SPANXCQ9NY87 97 aa9.42□□□□□ -0.9
NXF3-207ENST00000497850 NACAE9PAV3 2078 aa9.41□□□□□ -0.9
NXF3-207ENST00000497850 AKAP9Q99996 3911 aa9.41□□□□□ -0.9
NXF3-207ENST00000497850 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
NXF3-207ENST00000497850 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
NXF3-207ENST00000497850 WIPF1O43516 503 aa9.41□□□□□ -0.9
NXF3-207ENST00000497850 ATP5G1P05496 136 aa9.41□□□□□ -0.9
NXF3-207ENST00000497850 LINC00643Q86TS7 51 aa9.41□□□□□ -0.9
NXF3-207ENST00000497850 EPG5Q9HCE0 2579 aa9.41□□□□□ -0.9
NXF3-207ENST00000497850 A0A1W2PRX2 142 aa9.4□□□□□ -0.9
NXF3-207ENST00000497850 IGHV3-30-3P0DP02 117 aa9.4□□□□□ -0.9
NXF3-207ENST00000497850 NSUN5P1Q3KNT7 163 aa9.4□□□□□ -0.9
NXF3-207ENST00000497850 SDIM1Q6ZPB5 146 aa9.4□□□□□ -0.9
NXF3-207ENST00000497850 RNF152Q8N8N0 203 aa9.4□□□□□ -0.9
NXF3-207ENST00000497850 TRAV8-3A0A0A6YYJ7 113 aa9.4□□□□□ -0.9
NXF3-207ENST00000497850 C2orf48Q96LS8 159 aa9.4□□□□□ -0.9
NXF3-207ENST00000497850 APCP25054 2843 aa9.4□□□□□ -0.91
NXF3-207ENST00000497850 PRSS2P07478 247 aa9.39□□□□□ -0.91
NXF3-207ENST00000497850 COX7CP15954 63 aa9.39□□□□□ -0.91
NXF3-207ENST00000497850 MIAQ16674 131 aa9.39□□□□□ -0.91
NXF3-207ENST00000497850 RNASE13Q5GAN3 156 aaKnown RBP9.39□□□□□ -0.91
NXF3-207ENST00000497850 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
NXF3-207ENST00000497850 CHD6Q8TD26 2715 aa9.39□□□□□ -0.91
NXF3-207ENST00000497850 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
NXF3-207ENST00000497850 EDA2RQ9HAV5 297 aa9.39□□□□□ -0.91
NXF3-207ENST00000497850 ITPR3Q14573 2671 aa9.39□□□□□ -0.91
NXF3-207ENST00000497850 CRYGAP11844 174 aa9.38□□□□□ -0.91
NXF3-207ENST00000497850 RPS28P62857 69 aaKnown RBP9.38□□□□□ -0.91
NXF3-207ENST00000497850 RHOHQ15669 191 aa9.38□□□□□ -0.91
NXF3-207ENST00000497850 Q6ZSN1 163 aa9.38□□□□□ -0.91
NXF3-207ENST00000497850 C5orf38Q86SI9 138 aa9.38□□□□□ -0.91
NXF3-207ENST00000497850 MAP6D1Q9H9H5 199 aa9.38□□□□□ -0.91
NXF3-207ENST00000497850 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
NXF3-207ENST00000497850 WFDC11Q8NEX6 87 aa9.38□□□□□ -0.91
NXF3-207ENST00000497850 TIMM21Q9BVV7 248 aa9.38□□□□□ -0.91
NXF3-207ENST00000497850 CCDC168Q8NDH2 2452 aa9.37□□□□□ -0.91
NXF3-207ENST00000497850 TRAV25A0A0B4J276 109 aa9.37□□□□□ -0.91
NXF3-207ENST00000497850 NPC2P61916 151 aa9.37□□□□□ -0.91
NXF3-207ENST00000497850 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
NXF3-207ENST00000497850 C4orf3Q8WVX3 66 aa9.37□□□□□ -0.91
NXF3-207ENST00000497850 CXCL5P42830 114 aa9.36□□□□□ -0.91
NXF3-207ENST00000497850 GAGE2AQ6NT46 116 aa9.36□□□□□ -0.91
NXF3-207ENST00000497850 Q8N2B8 174 aa9.36□□□□□ -0.91
NXF3-207ENST00000497850 PEMTQ9UBM1 199 aa9.36□□□□□ -0.91
NXF3-207ENST00000497850 NF1P21359 2839 aa9.36□□□□□ -0.91
NXF3-207ENST00000497850 IGHV3OR16-12A0A075B7B8 117 aa9.36□□□□□ -0.91
NXF3-207ENST00000497850 CD28P10747 220 aa9.36□□□□□ -0.91
NXF3-207ENST00000497850 HIST1H4AP62805 103 aaKnown RBP9.36□□□□□ -0.91
NXF3-207ENST00000497850 OR13C6PQ8NH95 151 aa9.36□□□□□ -0.91
NXF3-207ENST00000497850 IGHV3-38A0A0C4DH36 116 aa9.35□□□□□ -0.91
NXF3-207ENST00000497850 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
NXF3-207ENST00000497850 SETD2Q9BYW2 2564 aaPredicted RBP9.35□□□□□ -0.91
NXF3-207ENST00000497850 DEFB114Q30KQ6 69 aa9.35□□□□□ -0.91
NXF3-207ENST00000497850 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
NXF3-207ENST00000497850 NDUFA12Q9UI09 145 aa9.35□□□□□ -0.91
NXF3-207ENST00000497850 FLNAP21333 2647 aaKnown RBP9.34□□□□□ -0.91
NXF3-207ENST00000497850 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
NXF3-207ENST00000497850 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
NXF3-207ENST00000497850 hADV29S1A0JD25 119 aa9.33□□□□□ -0.92
NXF3-207ENST00000497850 DNAJC9-AS1A6NH13 148 aa9.33□□□□□ -0.92
NXF3-207ENST00000497850 ZNF415Q09FC8 603 aa9.33□□□□□ -0.92
NXF3-207ENST00000497850 FAM104AQ969W3 186 aa9.33□□□□□ -0.92
NXF3-207ENST00000497850 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.33□□□□□ -0.92
NXF3-207ENST00000497850 IGKV2-29A2NJV5 120 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms