RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 SMAGPQ0VAQ4 97 aa6.36□□□□□ -1.39
PTPN3-206ENST00000497739 MIAQ16674 131 aa6.36□□□□□ -1.39
PTPN3-206ENST00000497739 C14orf177Q52M58 125 aa6.36□□□□□ -1.39
PTPN3-206ENST00000497739 RNASEKQ6P5S7 137 aaKnown RBP6.36□□□□□ -1.39
PTPN3-206ENST00000497739 ATRAIDQ6UW56 229 aa6.36□□□□□ -1.39
PTPN3-206ENST00000497739 CLPSL2Q6UWE3 100 aa6.36□□□□□ -1.39
PTPN3-206ENST00000497739 RPL39LQ96EH5 51 aaKnown RBP6.36□□□□□ -1.39
PTPN3-206ENST00000497739 TMEM101Q96IK0 257 aa6.36□□□□□ -1.39
PTPN3-206ENST00000497739 KIR2DL4Q99706 377 aa6.36□□□□□ -1.39
PTPN3-206ENST00000497739 KRTAP4-11Q9BYQ6 195 aa6.36□□□□□ -1.39
PTPN3-206ENST00000497739 SMIM27A0A1W2PRY6 76 aa6.35□□□□□ -1.39
PTPN3-206ENST00000497739 I3L3M4 83 aa6.35□□□□□ -1.39
PTPN3-206ENST00000497739 RBX1P62877 108 aa6.35□□□□□ -1.39
PTPN3-206ENST00000497739 MRPL54Q6P161 138 aaKnown RBP6.35□□□□□ -1.39
PTPN3-206ENST00000497739 UQCC3Q6UW78 93 aa6.35□□□□□ -1.39
PTPN3-206ENST00000497739 AMN1Q8IY45 258 aa6.35□□□□□ -1.39
PTPN3-206ENST00000497739 Q8N976 141 aa6.35□□□□□ -1.39
PTPN3-206ENST00000497739 DEFB104AQ8WTQ1 72 aa6.35□□□□□ -1.39
PTPN3-206ENST00000497739 LECT2O14960 151 aa6.34□□□□□ -1.39
PTPN3-206ENST00000497739 CKS2P33552 79 aa6.34□□□□□ -1.39
PTPN3-206ENST00000497739 XGP55808 180 aa6.34□□□□□ -1.39
PTPN3-206ENST00000497739 REG3AQ06141 175 aa6.34□□□□□ -1.39
PTPN3-206ENST00000497739 NTM-AS1Q6ZSK4 140 aa6.34□□□□□ -1.39
PTPN3-206ENST00000497739 LINC00269Q8N2A0 174 aa6.34□□□□□ -1.39
PTPN3-206ENST00000497739 Q8N814 137 aa6.34□□□□□ -1.39
PTPN3-206ENST00000497739 TMEM18Q96B42 140 aa6.34□□□□□ -1.39
PTPN3-206ENST00000497739 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.33□□□□□ -1.4
PTPN3-206ENST00000497739 IGKV3OR2-268A0A0C4DH90 116 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 LINC00862A6NCI5 91 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 H7C423 109 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 TCAPO15273 167 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 RAB4AP20338 218 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 Q5VSD8 79 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 ATP5L2Q7Z4Y8 100 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 BAALCQ8WXS3 180 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
PTPN3-206ENST00000497739 TRAV8-4A0A0B4J246 113 aa6.32□□□□□ -1.4
PTPN3-206ENST00000497739 TRBV6-5A0A0K0K1A5 114 aa6.32□□□□□ -1.4
PTPN3-206ENST00000497739 A0A1B0GUV1 79 aa6.32□□□□□ -1.4
PTPN3-206ENST00000497739 VCYO14598 125 aa6.32□□□□□ -1.4
PTPN3-206ENST00000497739 ZNF25P17030 456 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-206ENST00000497739 S100PP25815 95 aa6.32□□□□□ -1.4
PTPN3-206ENST00000497739 COMMD7Q86VX2 200 aa6.32□□□□□ -1.4
PTPN3-206ENST00000497739 OR5A1Q8NGJ0 315 aa6.32□□□□□ -1.4
PTPN3-206ENST00000497739 TMEM242Q9NWH2 141 aa6.32□□□□□ -1.4
PTPN3-206ENST00000497739 IGLV10-54A0A075B6I4 117 aa6.31□□□□□ -1.4
PTPN3-206ENST00000497739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.31□□□□□ -1.4
PTPN3-206ENST00000497739 IGKV2-29A2NJV5 120 aaPredicted RBP6.31□□□□□ -1.4
PTPN3-206ENST00000497739 C7orf77A4D0Y5 90 aa6.31□□□□□ -1.4
PTPN3-206ENST00000497739 SMKR1H3BMG3 65 aa6.31□□□□□ -1.4
PTPN3-206ENST00000497739 PPBPP02775 128 aa6.31□□□□□ -1.4
PTPN3-206ENST00000497739 FAM104BQ5XKR9 115 aa6.31□□□□□ -1.4
PTPN3-206ENST00000497739 TMEM70Q9BUB7 260 aa6.31□□□□□ -1.4
PTPN3-206ENST00000497739 LRCOL1A6NCL2 159 aa6.3□□□□□ -1.4
PTPN3-206ENST00000497739 FGF6P10767 208 aa6.3□□□□□ -1.4
PTPN3-206ENST00000497739 RAB5AP20339 215 aa6.3□□□□□ -1.4
PTPN3-206ENST00000497739 FUSP35637 526 aaKnown RBP eCLIP6.3□□□□□ -1.4
PTPN3-206ENST00000497739 NDUFA5Q16718 116 aa6.3□□□□□ -1.4
PTPN3-206ENST00000497739 MRPL51Q4U2R6 128 aaKnown RBP6.3□□□□□ -1.4
PTPN3-206ENST00000497739 ENHOQ6UWT2 76 aa6.3□□□□□ -1.4
PTPN3-206ENST00000497739 ORMDL3Q8N138 153 aa6.3□□□□□ -1.4
PTPN3-206ENST00000497739 RNF185Q96GF1 192 aa6.3□□□□□ -1.4
PTPN3-206ENST00000497739 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
PTPN3-206ENST00000497739 TRBV27A0A0K0K1C4 114 aa6.29□□□□□ -1.4
PTPN3-206ENST00000497739 TMEM218A2RU14 115 aa6.29□□□□□ -1.4
PTPN3-206ENST00000497739 D6R8Y8 96 aa6.29□□□□□ -1.4
PTPN3-206ENST00000497739 C20orf78Q9BR46 151 aa6.29□□□□□ -1.4
PTPN3-206ENST00000497739 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
PTPN3-206ENST00000497739 LRP1Q07954 4544 aaKnown RBP6.28□□□□□ -1.4
PTPN3-206ENST00000497739 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 USP17L23D6RBM5 183 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 PRYO14603 147 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 TSHBP01222 138 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 SLPIP03973 132 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 NPSP0C0P6 89 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 RPS10P46783 165 aaKnown RBP6.28□□□□□ -1.4
PTPN3-206ENST00000497739 KRTAP10-1P60331 282 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 IFITM2Q01629 132 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 SS18Q15532 418 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 C20orf203Q8NBC4 194 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 PRELID3AQ96N28 172 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 SEC11CQ9BY50 192 aa6.28□□□□□ -1.4
PTPN3-206ENST00000497739 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-206ENST00000497739 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
PTPN3-206ENST00000497739 PHOX2AO14813 284 aa6.27□□□□□ -1.41
PTPN3-206ENST00000497739 TMEM136Q6ZRR5 245 aa6.27□□□□□ -1.41
PTPN3-206ENST00000497739 IMMP2LQ96T52 175 aa6.27□□□□□ -1.41
PTPN3-206ENST00000497739 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
PTPN3-206ENST00000497739 MAP1LC3AQ9H492 121 aa6.27□□□□□ -1.41
PTPN3-206ENST00000497739 LAMTOR2Q9Y2Q5 125 aa6.27□□□□□ -1.41
PTPN3-206ENST00000497739 A0A1B0GXF2 115 aa6.26□□□□□ -1.41
PTPN3-206ENST00000497739 GAS8-AS1O95177 125 aa6.26□□□□□ -1.41
PTPN3-206ENST00000497739 POLR2KP53803 58 aaKnown RBP6.26□□□□□ -1.41
PTPN3-206ENST00000497739 NRACQ8N912 160 aa6.26□□□□□ -1.41
PTPN3-206ENST00000497739 TRBV24-1A0A075B6N3 115 aa6.25□□□□□ -1.41
PTPN3-206ENST00000497739 TRAV9-1A0A075B6T8 112 aa6.25□□□□□ -1.41
PTPN3-206ENST00000497739 WFDC2Q14508 124 aa6.25□□□□□ -1.41
PTPN3-206ENST00000497739 RHEBQ15382 184 aa6.25□□□□□ -1.41
PTPN3-206ENST00000497739 CHCHD10Q8WYQ3 142 aaPredicted RBP6.25□□□□□ -1.41
PTPN3-206ENST00000497739 RPS10P5Q9NQ39 176 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms