RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ALMS1Q8TCU4 4167 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 TET3O43151 1660 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 HSPG2P98160 4391 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 SPAG11BQ08648 103 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 SPAG11AQ6PDA7 123 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 PPP3R2Q96LZ3 170 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 SPANXDQ9BXN6 97 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 LINC00472Q9H8W2 130 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 V9GYH0 126 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 C2CD3Q4AC94 2353 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 BSNQ9UPA5 3926 aa-0.1□□□□□ -2.43
PSPC1-205ENST00000497722 TCHHQ07283 1943 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 LRP2P98164 4655 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 DOPEY2Q9Y3R5 2298 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 PDZD2O15018 2839 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 PAPPAQ13219 1627 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 MIF4GDA9UHW6 222 aaKnown RBP-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 COX17Q14061 63 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 WFDC2Q14508 124 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 KRTAP20-2Q3LI61 65 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 KRTAP19-7Q3SYF9 63 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 C5orf38Q86SI9 138 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 MGST2Q99735 147 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 MYOM2P54296 1465 aa-0.11□□□□□ -2.43
PSPC1-205ENST00000497722 SMG6Q86US8 1419 aaKnown RBP-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 TRBV7-3A0A075B6L6 115 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 CTXND1A0A1B0GTU2 59 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 EFCAB10A6NFE3 127 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 I3L2K1 104 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 SSSCA1O60232 199 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 TNFP01375 233 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 APOC2P02655 101 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 Q5VSD8 79 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 COMMD6Q7Z4G1 85 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 C8orf59Q8N0T1 100 aaPredicted RBP-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 PP6455Q8WZ26 134 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 SPCS1Q9Y6A9 102 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 ROCK2O75116 1388 aaKnown RBP-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 EIF4G3O43432 1585 aaKnown RBP-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 ERCC6L2Q5T890 1561 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 DCHS2Q6V1P9 2916 aa-0.12□□□□□ -2.43
PSPC1-205ENST00000497722 MUC12Q9UKN1 5478 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 PTPRQQ9UMZ3 2332 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 FAT2Q9NYQ8 4349 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 COL6A3P12111 3177 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 DIP2CQ9Y2E4 1556 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 KTN1Q86UP2 1357 aaKnown RBP-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 TRAV22A0A0B4J277 110 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 M0R3E3 92 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 UQCR11O14957 56 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 BCE1O60756 84 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 CATR1Q13166 79 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 KRTAP19-8Q3LI54 63 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 RPL13AP3Q6NVV1 102 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 Q8IZM0 81 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 NPVFQ9HCQ7 196 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 DYNLRB1Q9NP97 96 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 LINC01558Q9Y6Z2 57 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 STAB2Q8WWQ8 2551 aa-0.13□□□□□ -2.43
PSPC1-205ENST00000497722 ANKRD17O75179 2603 aaKnown RBP-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 TENM2Q9NT68 2774 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 IGLC7A0M8Q6 106 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 F8VRH5 84 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 HMGN4O00479 90 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 AKAIN1P0CW23 69 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 TPPP2P59282 170 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 BAGE2Q86Y30 109 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 TSLPQ969D9 159 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 TP53AIP1Q9HCN2 124 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 ZNF292O60281 2723 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 SRRM2Q9UQ35 2752 aaKnown RBP-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 AKAP6Q13023 2319 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 SETXQ7Z333 2677 aaKnown RBP-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 C10orf71Q711Q0 1435 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 PKD1L1Q8TDX9 2849 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 TNXBP22105 4242 aa-0.14□□□□□ -2.43
PSPC1-205ENST00000497722 BTAF1O14981 1849 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 APC2O95996 2303 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 PLCE1Q9P212 2302 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 CHD6Q8TD26 2715 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 LOC285095A0A1B0GVY8 99 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 OOSP1A8MZH6 123 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 IFNGP01579 166 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 HAMPP81172 84 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 DEFB109BQ30KR1 87 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 TMEM170BQ5T4T1 132 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 MYO7BQ6PIF6 2116 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 LINC00474Q9P2X8 69 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 KMT2CQ8NEZ4 4911 aaKnown RBP-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 MUC2Q02817 5179 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 NRKQ7Z2Y5 1582 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 ZFHX3Q15911 3703 aa-0.15□□□□□ -2.43
PSPC1-205ENST00000497722 WNK1Q9H4A3 2382 aa-0.16□□□□□ -2.43
PSPC1-205ENST00000497722 SPTA1P02549 2419 aa-0.16□□□□□ -2.43
PSPC1-205ENST00000497722 CREBBPQ92793 2442 aa-0.16□□□□□ -2.43
PSPC1-205ENST00000497722 HMGXB3Q12766 1538 aa-0.16□□□□□ -2.43
PSPC1-205ENST00000497722 EHBP1L1Q8N3D4 1523 aa-0.16□□□□□ -2.43
PSPC1-205ENST00000497722 TULP4Q9NRJ4 1543 aa-0.16□□□□□ -2.43
PSPC1-205ENST00000497722 KDM5AP29375 1690 aaKnown RBP-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 SCN7AQ01118 1682 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms