RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 ICOSQ9Y6W8 199 aa12.16□□□□□ -0.46
ELL3-208ENST00000497700 A0A096LNJ9 63 aa12.15□□□□□ -0.46
ELL3-208ENST00000497700 INAFM2P0DMQ5 153 aa12.15□□□□□ -0.46
ELL3-208ENST00000497700 FCER1GP30273 86 aa12.15□□□□□ -0.46
ELL3-208ENST00000497700 ORMDL2Q53FV1 153 aa12.15□□□□□ -0.46
ELL3-208ENST00000497700 TEX43Q6ZNM6 134 aa12.15□□□□□ -0.46
ELL3-208ENST00000497700 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 GAGE12JA6NER3 117 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 TSHBP01222 138 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 HBDP02042 147 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 KRTDAPP60985 99 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 UBE2D3P61077 147 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 UBE2D2P62837 147 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 GAGE1Q13065 139 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 GAGE4Q13068 117 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 GAGE5Q13069 117 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 GAGE13Q4V321 117 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 Q5VSD8 79 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 ZNF664Q8N3J9 261 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 PGPEP1Q9NXJ5 209 aa12.14□□□□□ -0.47
ELL3-208ENST00000497700 C3orf79P0CE67 100 aa12.13□□□□□ -0.47
ELL3-208ENST00000497700 HAMPP81172 84 aa12.13□□□□□ -0.47
ELL3-208ENST00000497700 LYPD5Q6UWN5 251 aa12.13□□□□□ -0.47
ELL3-208ENST00000497700 DMBT1Q9UGM3 2413 aaPredicted RBP12.13□□□□□ -0.47
ELL3-208ENST00000497700 A0A087WTM6 91 aa12.12□□□□□ -0.47
ELL3-208ENST00000497700 LINC00587B1AMM8 73 aa12.12□□□□□ -0.47
ELL3-208ENST00000497700 LINC00694P0DN24 101 aa12.12□□□□□ -0.47
ELL3-208ENST00000497700 DAZ4Q86SG3 579 aaKnown RBP12.12□□□□□ -0.47
ELL3-208ENST00000497700 DAZ3Q9NR90 486 aaKnown RBP12.12□□□□□ -0.47
ELL3-208ENST00000497700 HSPB8Q9UJY1 196 aa12.12□□□□□ -0.47
ELL3-208ENST00000497700 EREGO14944 169 aa12.11□□□□□ -0.47
ELL3-208ENST00000497700 LEPROTL1O95214 131 aa12.11□□□□□ -0.47
ELL3-208ENST00000497700 GYPEP15421 78 aa12.11□□□□□ -0.47
ELL3-208ENST00000497700 G0S2P27469 103 aa12.11□□□□□ -0.47
ELL3-208ENST00000497700 WFDC10BQ8IUB3 73 aa12.11□□□□□ -0.47
ELL3-208ENST00000497700 DEFB104AQ8WTQ1 72 aa12.11□□□□□ -0.47
ELL3-208ENST00000497700 FLG2Q5D862 2391 aaPredicted RBP12.11□□□□□ -0.47
ELL3-208ENST00000497700 IGHV3-38A0A0C4DH36 116 aa12.1□□□□□ -0.47
ELL3-208ENST00000497700 SMR3BP02814 79 aaPredicted RBP12.1□□□□□ -0.47
ELL3-208ENST00000497700 COTL1Q14019 142 aa12.1□□□□□ -0.47
ELL3-208ENST00000497700 VPS13BQ7Z7G8 4022 aa12.09□□□□□ -0.47
ELL3-208ENST00000497700 DDTP30046 118 aa12.09□□□□□ -0.47
ELL3-208ENST00000497700 Q8N976 141 aa12.09□□□□□ -0.47
ELL3-208ENST00000497700 VAMP8Q9BV40 100 aa12.09□□□□□ -0.47
ELL3-208ENST00000497700 PRO1933Q9H354 126 aa12.09□□□□□ -0.47
ELL3-208ENST00000497700 MYCBP2O75592 4640 aa12.09□□□□□ -0.47
ELL3-208ENST00000497700 C20orf202A1L168 122 aa12.08□□□□□ -0.48
ELL3-208ENST00000497700 MRPL23Q16540 153 aaKnown RBP12.08□□□□□ -0.48
ELL3-208ENST00000497700 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
ELL3-208ENST00000497700 LINC00173Q6ZV60 143 aa12.08□□□□□ -0.48
ELL3-208ENST00000497700 TOMM6Q96B49 74 aa12.08□□□□□ -0.48
ELL3-208ENST00000497700 LINC01549A6NIU2 74 aa12.07□□□□□ -0.48
ELL3-208ENST00000497700 C2orf66Q6UXQ4 117 aa12.07□□□□□ -0.48
ELL3-208ENST00000497700 MAP1LC3CQ9BXW4 147 aa12.07□□□□□ -0.48
ELL3-208ENST00000497700 NFE4Q86UQ8 179 aa12.06□□□□□ -0.48
ELL3-208ENST00000497700 C20orf203Q8NBC4 194 aa12.06□□□□□ -0.48
ELL3-208ENST00000497700 ATP6V0E2Q8NHE4 81 aa12.06□□□□□ -0.48
ELL3-208ENST00000497700 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
ELL3-208ENST00000497700 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
ELL3-208ENST00000497700 CYSLTR1Q9Y271 337 aa12.06□□□□□ -0.48
ELL3-208ENST00000497700 ATP5LO75964 103 aa12.05□□□□□ -0.48
ELL3-208ENST00000497700 NTM-AS1Q6ZSK4 140 aa12.05□□□□□ -0.48
ELL3-208ENST00000497700 SYS1-DBNDD2H3BUS1 97 aa12.04□□□□□ -0.48
ELL3-208ENST00000497700 TMEM97Q5BJF2 176 aa12.04□□□□□ -0.48
ELL3-208ENST00000497700 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
ELL3-208ENST00000497700 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
ELL3-208ENST00000497700 RPL39P62891 51 aaKnown RBP12.03□□□□□ -0.48
ELL3-208ENST00000497700 SH2D6Q7Z4S9 175 aa12.03□□□□□ -0.48
ELL3-208ENST00000497700 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.49
ELL3-208ENST00000497700 IGIPA6NJ69 53 aa12.02□□□□□ -0.49
ELL3-208ENST00000497700 GCSHP23434 173 aa12.02□□□□□ -0.49
ELL3-208ENST00000497700 ERASQ7Z444 233 aa12.02□□□□□ -0.49
ELL3-208ENST00000497700 MIEN1Q9BRT3 115 aa12.01□□□□□ -0.49
ELL3-208ENST00000497700 SRRM2Q9UQ35 2752 aaKnown RBP12□□□□□ -0.49
ELL3-208ENST00000497700 TRBV25-1A0A075B6N4 114 aa12□□□□□ -0.49
ELL3-208ENST00000497700 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
ELL3-208ENST00000497700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
ELL3-208ENST00000497700 MRPL52Q86TS9 123 aaKnown RBP12□□□□□ -0.49
ELL3-208ENST00000497700 TMEM141Q96I45 108 aa12□□□□□ -0.49
ELL3-208ENST00000497700 TIMM17AQ99595 171 aa12□□□□□ -0.49
ELL3-208ENST00000497700 TMEM243Q9BU79 118 aa12□□□□□ -0.49
ELL3-208ENST00000497700 PAM16Q9Y3D7 125 aa12□□□□□ -0.49
ELL3-208ENST00000497700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
ELL3-208ENST00000497700 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
ELL3-208ENST00000497700 CTAG1AP78358 180 aa11.99□□□□□ -0.49
ELL3-208ENST00000497700 SPATA45Q537H7 98 aa11.99□□□□□ -0.49
ELL3-208ENST00000497700 PYGO1Q9Y3Y4 419 aa11.99□□□□□ -0.49
ELL3-208ENST00000497700 LBHQ53QV2 105 aaPredicted RBP11.98□□□□□ -0.49
ELL3-208ENST00000497700 LINC01545Q5VT33 79 aa11.98□□□□□ -0.49
ELL3-208ENST00000497700 C14orf144Q96I85 54 aa11.98□□□□□ -0.49
ELL3-208ENST00000497700 TIMM21Q9BVV7 248 aa11.98□□□□□ -0.49
ELL3-208ENST00000497700 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
ELL3-208ENST00000497700 IGLV5-52A0A0A0MRZ9 124 aa11.97□□□□□ -0.49
ELL3-208ENST00000497700 H7C423 109 aa11.97□□□□□ -0.49
ELL3-208ENST00000497700 PRSS1P07477 247 aa11.97□□□□□ -0.49
ELL3-208ENST00000497700 Q6ZN92 141 aa11.97□□□□□ -0.49
ELL3-208ENST00000497700 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
ELL3-208ENST00000497700 LRCOL1A6NCL2 159 aa11.96□□□□□ -0.49
ELL3-208ENST00000497700 HSBP1L1C9JCN9 74 aa11.96□□□□□ -0.49
ELL3-208ENST00000497700 NPSP0C0P6 89 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms