RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 D6R8Y8 96 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 CDK2AP2O75956 126 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 TNFRSF6BO95407 300 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 FCER1GP30273 86 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 SMAGPQ0VAQ4 97 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 C14orf177Q52M58 125 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 ORMDL3Q8N138 153 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 MAPKAPK5-AS1Q8N8E1 139 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 BAALCQ8WXS3 180 aa7.58□□□□□ -1.2
HLA-B-254ENST00000497377 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.57□□□□□ -1.2
HLA-B-254ENST00000497377 IGLV5-52A0A0A0MRZ9 124 aa7.57□□□□□ -1.2
HLA-B-254ENST00000497377 IGKV2-29A2NJV5 120 aaPredicted RBP7.57□□□□□ -1.2
HLA-B-254ENST00000497377 FGF6P10767 208 aa7.57□□□□□ -1.2
HLA-B-254ENST00000497377 S100PP25815 95 aa7.57□□□□□ -1.2
HLA-B-254ENST00000497377 RHEBQ15382 184 aa7.57□□□□□ -1.2
HLA-B-254ENST00000497377 RNASEKQ6P5S7 137 aaKnown RBP7.57□□□□□ -1.2
HLA-B-254ENST00000497377 CLPSL2Q6UWE3 100 aa7.57□□□□□ -1.2
HLA-B-254ENST00000497377 MRPL52Q86TS9 123 aaKnown RBP7.57□□□□□ -1.2
HLA-B-254ENST00000497377 TMEM101Q96IK0 257 aa7.57□□□□□ -1.2
HLA-B-254ENST00000497377 LAMTOR2Q9Y2Q5 125 aa7.57□□□□□ -1.2
HLA-B-254ENST00000497377 GCSHP23434 173 aa7.56□□□□□ -1.2
HLA-B-254ENST00000497377 TMEM136Q6ZRR5 245 aa7.56□□□□□ -1.2
HLA-B-254ENST00000497377 TMEM18Q96B42 140 aa7.56□□□□□ -1.2
HLA-B-254ENST00000497377 SMIM2Q9BVW6 85 aa7.56□□□□□ -1.2
HLA-B-254ENST00000497377 KRTAP4-2Q9BYR5 136 aa7.56□□□□□ -1.2
HLA-B-254ENST00000497377 LECT2O14960 151 aa7.55□□□□□ -1.2
HLA-B-254ENST00000497377 NPYP01303 97 aa7.55□□□□□ -1.2
HLA-B-254ENST00000497377 HLA-DQA1P01909 254 aa7.55□□□□□ -1.2
HLA-B-254ENST00000497377 LINC00310P59036 64 aa7.55□□□□□ -1.2
HLA-B-254ENST00000497377 WFDC2Q14508 124 aa7.55□□□□□ -1.2
HLA-B-254ENST00000497377 KRTAP26-1Q6PEX3 210 aa7.55□□□□□ -1.2
HLA-B-254ENST00000497377 OR5A1Q8NGJ0 315 aa7.55□□□□□ -1.2
HLA-B-254ENST00000497377 PRELID3AQ96N28 172 aa7.55□□□□□ -1.2
HLA-B-254ENST00000497377 CSDC2Q9Y534 153 aaKnown RBP7.55□□□□□ -1.2
HLA-B-254ENST00000497377 PRSS47A8MTI9 375 aa7.54□□□□□ -1.2
HLA-B-254ENST00000497377 NDUFA5Q16718 116 aa7.54□□□□□ -1.2
HLA-B-254ENST00000497377 CLRN3Q8NCR9 226 aa7.54□□□□□ -1.2
HLA-B-254ENST00000497377 IGLV10-54A0A075B6I4 117 aa7.53□□□□□ -1.2
HLA-B-254ENST00000497377 FUSP35637 526 aaKnown RBP eCLIP7.53□□□□□ -1.2
HLA-B-254ENST00000497377 COX19Q49B96 90 aa7.53□□□□□ -1.2
HLA-B-254ENST00000497377 DGAT2L7PQ6IED9 249 aa7.53□□□□□ -1.2
HLA-B-254ENST00000497377 TIMM21Q9BVV7 248 aa7.53□□□□□ -1.2
HLA-B-254ENST00000497377 USP17L23D6RBM5 183 aa7.52□□□□□ -1.21
HLA-B-254ENST00000497377 RAB5AP20339 215 aa7.52□□□□□ -1.21
HLA-B-254ENST00000497377 MAP1LC3AQ9H492 121 aa7.52□□□□□ -1.21
HLA-B-254ENST00000497377 RPS10P5Q9NQ39 176 aa7.52□□□□□ -1.21
HLA-B-254ENST00000497377 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
HLA-B-254ENST00000497377 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.51□□□□□ -1.21
HLA-B-254ENST00000497377 IGKV3OR2-268A0A0C4DH90 116 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 CCL25O15444 150 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 SNAPINO95295 136 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 KRTAP10-1P60331 282 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 SVBPQ8N300 66 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 ZNF664Q8N3J9 261 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 GNB1LQ9BYB4 327 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 LRP1BQ9NZR2 4599 aa7.51□□□□□ -1.21
HLA-B-254ENST00000497377 K7EMI3 77 aa7.5□□□□□ -1.21
HLA-B-254ENST00000497377 APOC3P02656 99 aa7.5□□□□□ -1.21
HLA-B-254ENST00000497377 SS18Q15532 418 aa7.5□□□□□ -1.21
HLA-B-254ENST00000497377 CFAP161Q6P656 301 aa7.5□□□□□ -1.21
HLA-B-254ENST00000497377 CHCHD10Q8WYQ3 142 aaPredicted RBP7.5□□□□□ -1.21
HLA-B-254ENST00000497377 SPANXA1Q9NS26 97 aa7.5□□□□□ -1.21
HLA-B-254ENST00000497377 KIAA1109Q2LD37 5005 aa7.49□□□□□ -1.21
HLA-B-254ENST00000497377 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
HLA-B-254ENST00000497377 GAGE12HA6NDE8 117 aa7.49□□□□□ -1.21
HLA-B-254ENST00000497377 MT-ND6P03923 174 aa7.49□□□□□ -1.21
HLA-B-254ENST00000497377 Q8N8P6 123 aa7.49□□□□□ -1.21
HLA-B-254ENST00000497377 NXT2Q9NPJ8 142 aaKnown RBP7.49□□□□□ -1.21
HLA-B-254ENST00000497377 LOC389332A0A1B0GUA5 103 aa7.48□□□□□ -1.21
HLA-B-254ENST00000497377 PRSS1P07477 247 aa7.48□□□□□ -1.21
HLA-B-254ENST00000497377 G0S2P27469 103 aa7.48□□□□□ -1.21
HLA-B-254ENST00000497377 MRPS36P82909 103 aaKnown RBP7.48□□□□□ -1.21
HLA-B-254ENST00000497377 DNAH5Q8TE73 4624 aa7.48□□□□□ -1.21
HLA-B-254ENST00000497377 C1orf196B1AJZ1 125 aa7.47□□□□□ -1.21
HLA-B-254ENST00000497377 RPL39P62891 51 aaKnown RBP7.47□□□□□ -1.21
HLA-B-254ENST00000497377 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
HLA-B-254ENST00000497377 KRTAP4-11Q9BYQ6 195 aa7.47□□□□□ -1.21
HLA-B-254ENST00000497377 AP5S1Q9NUS5 200 aa7.47□□□□□ -1.21
HLA-B-254ENST00000497377 hDV102S1A0JD36 115 aa7.46□□□□□ -1.22
HLA-B-254ENST00000497377 IFI27P40305 119 aaPredicted RBP7.46□□□□□ -1.22
HLA-B-254ENST00000497377 XCL1P47992 114 aa7.46□□□□□ -1.22
HLA-B-254ENST00000497377 CNBPP62633 177 aaKnown RBP7.46□□□□□ -1.22
HLA-B-254ENST00000497377 FOXI1Q12951 378 aa7.46□□□□□ -1.22
HLA-B-254ENST00000497377 CD164L2Q6UWJ8 174 aa7.46□□□□□ -1.22
HLA-B-254ENST00000497377 Q6ZSA8 131 aa7.46□□□□□ -1.22
HLA-B-254ENST00000497377 Q6ZUT4 128 aa7.46□□□□□ -1.22
HLA-B-254ENST00000497377 PYGO1Q9Y3Y4 419 aa7.46□□□□□ -1.22
HLA-B-254ENST00000497377 HERC2O95714 4834 aa7.46□□□□□ -1.22
HLA-B-254ENST00000497377 HSPG2P98160 4391 aa7.45□□□□□ -1.22
HLA-B-254ENST00000497377 XGP55808 180 aa7.45□□□□□ -1.22
HLA-B-254ENST00000497377 KIAA1644Q3SXP7 199 aa7.45□□□□□ -1.22
HLA-B-254ENST00000497377 CYSLTR1Q9Y271 337 aa7.45□□□□□ -1.22
HLA-B-254ENST00000497377 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.44□□□□□ -1.22
HLA-B-254ENST00000497377 TRAV13-1A0A0B4J241 112 aa7.44□□□□□ -1.22
HLA-B-254ENST00000497377 NPSP0C0P6 89 aa7.44□□□□□ -1.22
HLA-B-254ENST00000497377 FABP9Q0Z7S8 132 aa7.44□□□□□ -1.22
HLA-B-254ENST00000497377 Q8N1X5 172 aa7.44□□□□□ -1.22
HLA-B-254ENST00000497377 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms