RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	FAM104A	Q969W3	186 aa		5.3	□□□□□ -1.56
EFNA1-205	ENST00000497282	MRPL18	Q9H0U6	180 aa	Known RBP	5.3	□□□□□ -1.56
EFNA1-205	ENST00000497282	COX11	Q9Y6N1	276 aa		5.3	□□□□□ -1.56
EFNA1-205	ENST00000497282	PKD1	P98161	4303 aa		5.29	□□□□□ -1.56
EFNA1-205	ENST00000497282	C16orf90	A8MZG2	172 aa		5.29	□□□□□ -1.56
EFNA1-205	ENST00000497282	EREG	O14944	169 aa		5.29	□□□□□ -1.56
EFNA1-205	ENST00000497282		Q8N8P6	123 aa		5.29	□□□□□ -1.56
EFNA1-205	ENST00000497282	SVIP	Q8NHG7	77 aa		5.29	□□□□□ -1.56
EFNA1-205	ENST00000497282	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.29	□□□□□ -1.56
EFNA1-205	ENST00000497282	CDC42SE2	Q9NRR3	84 aa		5.29	□□□□□ -1.56
EFNA1-205	ENST00000497282	TRAV8-4	A0A0B4J246	113 aa		5.28	□□□□□ -1.56
EFNA1-205	ENST00000497282	IFI27	P40305	119 aa	Predicted RBP	5.28	□□□□□ -1.56
EFNA1-205	ENST00000497282	ZNF664	Q8N3J9	261 aa		5.28	□□□□□ -1.56
EFNA1-205	ENST00000497282	TMEM101	Q96IK0	257 aa		5.28	□□□□□ -1.56
EFNA1-205	ENST00000497282	OPRPN	Q99935	248 aa	Predicted RBP	5.28	□□□□□ -1.56
EFNA1-205	ENST00000497282	TIMM21	Q9BVV7	248 aa		5.28	□□□□□ -1.56
EFNA1-205	ENST00000497282	CSDC2	Q9Y534	153 aa	Known RBP	5.28	□□□□□ -1.56
EFNA1-205	ENST00000497282	BIRC6	Q9NR09	4857 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	LINC00959	A0A1B0GUT2	108 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	GAGE12H	A6NDE8	117 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	USP17L23	D6RBM5	183 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	RAB5A	P20339	215 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	FABP9	Q0Z7S8	132 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	CDPF1	Q6NVV7	123 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	TMEM18	Q96B42	140 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	NXT2	Q9NPJ8	142 aa	Known RBP	5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	SMCO4	Q9NRQ5	59 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	SPANXA1	Q9NS26	97 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	TRAPPC1	Q9Y5R8	145 aa		5.27	□□□□□ -1.57
EFNA1-205	ENST00000497282	DNAH11	Q96DT5	4516 aa		5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	IGLV4-3	A0A075B6K6	122 aa		5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	CCL25	O15444	150 aa		5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	DGAT2L7P	Q6IED9	249 aa		5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	C2orf66	Q6UXQ4	117 aa		5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	C18orf32	Q8TCD1	76 aa		5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	NTN5	Q8WTR8	489 aa	Predicted RBP	5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	URB1-AS1	Q96HZ7	61 aa		5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	PGPEP1	Q9NXJ5	209 aa		5.26	□□□□□ -1.57
EFNA1-205	ENST00000497282	PKHD1	P08F94	4074 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	IGLV5-52	A0A0A0MRZ9	124 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	LINC01546	A6NGU7	62 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282		K7EMI3	77 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	SCO1	O75880	301 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	PRSS1	P07477	247 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	XCL1	P47992	114 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	KRTAP10-1	P60331	282 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	MRPS36	P82909	103 aa	Known RBP	5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	SMAGP	Q0VAQ4	97 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	FOXI1	Q12951	378 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	LINC01620	Q4KN68	170 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	ORMDL2	Q53FV1	153 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	C15orf56	Q8N910	161 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	CYSLTR1	Q9Y271	337 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	PYGO1	Q9Y3Y4	419 aa		5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282	DYNC1H1	Q14204	4646 aa	Known RBP	5.25	□□□□□ -1.57
EFNA1-205	ENST00000497282		A0A096LNJ9	63 aa		5.24	□□□□□ -1.57
EFNA1-205	ENST00000497282	TRAV13-1	A0A0B4J241	112 aa		5.24	□□□□□ -1.57
EFNA1-205	ENST00000497282	IGIP	A6NJ69	53 aa		5.24	□□□□□ -1.57
EFNA1-205	ENST00000497282	SS18	Q15532	418 aa		5.24	□□□□□ -1.57
EFNA1-205	ENST00000497282	ZC2HC1B	Q5TFG8	222 aa		5.24	□□□□□ -1.57
EFNA1-205	ENST00000497282	LINC00173	Q6ZV60	143 aa		5.24	□□□□□ -1.57
EFNA1-205	ENST00000497282	PRSS3P2	Q8NHM4	247 aa		5.24	□□□□□ -1.57
EFNA1-205	ENST00000497282	COLCA2	A8K830	154 aa		5.23	□□□□□ -1.57
EFNA1-205	ENST00000497282	GCSH	P23434	173 aa		5.23	□□□□□ -1.57
EFNA1-205	ENST00000497282	C14orf177	Q52M58	125 aa		5.23	□□□□□ -1.57
EFNA1-205	ENST00000497282	TOMM6	Q96B49	74 aa		5.23	□□□□□ -1.57
EFNA1-205	ENST00000497282	TMEM141	Q96I45	108 aa		5.23	□□□□□ -1.57
EFNA1-205	ENST00000497282	KRTAP17-1	Q9BYP8	105 aa		5.23	□□□□□ -1.57
EFNA1-205	ENST00000497282	hDV102S1	A0JD36	115 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	IFITM10	A6NMD0	228 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	C1orf196	B1AJZ1	125 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	SLPI	P03973	132 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	TRGC2	P03986	189 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	HIGD2B	Q4VC39	106 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	CD164L2	Q6UWJ8	174 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	FA2H	Q7L5A8	372 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	AMELX	Q99217	191 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	FAM30A	Q9NZY2	134 aa		5.22	□□□□□ -1.57
EFNA1-205	ENST00000497282	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282		A6NJY4	79 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	CDK2AP2	O75956	126 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	NPS	P0C0P6	89 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	HAMP	P81172	84 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	PMCHL1	Q16048	86 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	TEX43	Q6ZNM6	134 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	TIMM17A	Q99595	171 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	AP5S1	Q9NUS5	200 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	DNAH5	Q8TE73	4624 aa		5.21	□□□□□ -1.58
EFNA1-205	ENST00000497282	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282	TMEM238L	A0A1B0GVL6	79 aa		5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282	LINC00614	P0C842	121 aa		5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282	UBE2D1	P51668	147 aa		5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282	XG	P55808	180 aa		5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282	CNBP	P62633	177 aa	Known RBP	5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282	COX6A2	Q02221	97 aa		5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282	LINC00242	Q5T6M2	205 aa		5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282		Q6ZN92	141 aa		5.2	□□□□□ -1.58
EFNA1-205	ENST00000497282		Q6ZSA8	131 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 9145.9 ms