RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 DCDP81605 110 aaKnown RBP-0.05□□□□□ -2.42
PHC3-216ENST00000497171 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
PHC3-216ENST00000497171 MRPL54Q6P161 138 aaKnown RBP-0.05□□□□□ -2.42
PHC3-216ENST00000497171 MYOZ3Q8TDC0 251 aa-0.05□□□□□ -2.42
PHC3-216ENST00000497171 AMELXQ99217 191 aa-0.05□□□□□ -2.42
PHC3-216ENST00000497171 TP53AIP1Q9HCN2 124 aa-0.05□□□□□ -2.42
PHC3-216ENST00000497171 TENM4Q6N022 2769 aa-0.05□□□□□ -2.42
PHC3-216ENST00000497171 KIF21AQ7Z4S6 1674 aa-0.05□□□□□ -2.42
PHC3-216ENST00000497171 FLNAP21333 2647 aaKnown RBP-0.05□□□□□ -2.42
PHC3-216ENST00000497171 ROCK2O75116 1388 aaKnown RBP-0.06□□□□□ -2.42
PHC3-216ENST00000497171 IGLC7A0M8Q6 106 aa-0.06□□□□□ -2.42
PHC3-216ENST00000497171 PI4KAP42356 2102 aa-0.06□□□□□ -2.42
PHC3-216ENST00000497171 WNK2Q9Y3S1 2297 aa-0.06□□□□□ -2.42
PHC3-216ENST00000497171 KTN1Q86UP2 1357 aaKnown RBP-0.06□□□□□ -2.42
PHC3-216ENST00000497171 LOC285095A0A1B0GVY8 99 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 OOSP1A8MZH6 123 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 HMGN4O00479 90 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 SSSCA1O60232 199 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 TNFP01375 233 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 C9orf153Q5TBE3 101 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 Q5VSD8 79 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 RPL13AP3Q6NVV1 102 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 COMMD6Q7Z4G1 85 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 C5orf38Q86SI9 138 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 PP6455Q8WZ26 134 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 FLNCQ14315 2725 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 NF1P21359 2839 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 FAM208BQ5VWN6 2430 aa-0.07□□□□□ -2.42
PHC3-216ENST00000497171 ZNF292O60281 2723 aa-0.08□□□□□ -2.42
PHC3-216ENST00000497171 SPRR1AP35321 89 aa-0.08□□□□□ -2.42
PHC3-216ENST00000497171 PIGYQ3MUY2 71 aa-0.08□□□□□ -2.42
PHC3-216ENST00000497171 LINC00472Q9H8W2 130 aa-0.08□□□□□ -2.42
PHC3-216ENST00000497171 LINC01558Q9Y6Z2 57 aa-0.08□□□□□ -2.42
PHC3-216ENST00000497171 PPRC1Q5VV67 1664 aaKnown RBP-0.08□□□□□ -2.42
PHC3-216ENST00000497171 SBF2Q86WG5 1849 aa-0.08□□□□□ -2.42
PHC3-216ENST00000497171 PDZD2O15018 2839 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 MUC12Q9UKN1 5478 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 DOPEY1Q5JWR5 2465 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 STAB1Q9NY15 2570 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 CHKB-CPT1BH3BT56 60 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 SFT2D2O95562 160 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 LINC00474Q9P2X8 69 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 PSME4Q14997 1843 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 SPTBN2O15020 2390 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 LAMC1P11047 1609 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 CREBBPQ92793 2442 aa-0.09□□□□□ -2.42
PHC3-216ENST00000497171 C10orf71Q711Q0 1435 aa-0.1□□□□□ -2.43
PHC3-216ENST00000497171 TRBV6-1A0A0K0K1D8 114 aa-0.1□□□□□ -2.43
PHC3-216ENST00000497171 UQCR10Q9UDW1 63 aa-0.1□□□□□ -2.43
PHC3-216ENST00000497171 RIMS1Q86UR5 1692 aaKnown RBP-0.11□□□□□ -2.43
PHC3-216ENST00000497171 PCLOQ9Y6V0 5065 aa-0.11□□□□□ -2.43
PHC3-216ENST00000497171 UBE2L5PA0A1B0GUS4 154 aa-0.11□□□□□ -2.43
PHC3-216ENST00000497171 UBE2L3P68036 154 aaKnown RBP-0.11□□□□□ -2.43
PHC3-216ENST00000497171 FAIMQ9NVQ4 179 aa-0.11□□□□□ -2.43
PHC3-216ENST00000497171 PTPN13Q12923 2485 aa-0.11□□□□□ -2.43
PHC3-216ENST00000497171 ROBO1Q9Y6N7 1651 aa-0.11□□□□□ -2.43
PHC3-216ENST00000497171 ABCA2Q9BZC7 2435 aa-0.12□□□□□ -2.43
PHC3-216ENST00000497171 A0A1B0GV90 55 aa-0.12□□□□□ -2.43
PHC3-216ENST00000497171 FAM24AA6NFZ4 105 aa-0.12□□□□□ -2.43
PHC3-216ENST00000497171 MGPP08493 103 aa-0.12□□□□□ -2.43
PHC3-216ENST00000497171 GNG11P61952 73 aa-0.12□□□□□ -2.43
PHC3-216ENST00000497171 PTPRQQ9UMZ3 2332 aa-0.12□□□□□ -2.43
PHC3-216ENST00000497171 SETD2Q9BYW2 2564 aaPredicted RBP-0.12□□□□□ -2.43
PHC3-216ENST00000497171 SRRM2Q9UQ35 2752 aaKnown RBP-0.12□□□□□ -2.43
PHC3-216ENST00000497171 ZANQ9Y493 2812 aa-0.13□□□□□ -2.43
PHC3-216ENST00000497171 STAB2Q8WWQ8 2551 aa-0.13□□□□□ -2.43
PHC3-216ENST00000497171 A2ML1A8K2U0 1454 aa-0.13□□□□□ -2.43
PHC3-216ENST00000497171 I3L2K1 104 aa-0.13□□□□□ -2.43
PHC3-216ENST00000497171 TEP1Q99973 2627 aaKnown RBP-0.13□□□□□ -2.43
PHC3-216ENST00000497171 TCHHQ07283 1943 aa-0.13□□□□□ -2.43
PHC3-216ENST00000497171 KMT2CQ8NEZ4 4911 aaKnown RBP-0.13□□□□□ -2.43
PHC3-216ENST00000497171 KDM5AP29375 1690 aaKnown RBP-0.14□□□□□ -2.43
PHC3-216ENST00000497171 CUL7Q14999 1698 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 QRICH2Q9H0J4 1663 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 PLCE1Q9P212 2302 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 SHANK2Q9UPX8 1470 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 EFCAB10A6NFE3 127 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 DLEU1O43261 78 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 IGLC1P0CG04 106 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 UBA52P62987 128 aaKnown RBP-0.14□□□□□ -2.43
PHC3-216ENST00000497171 SVBPQ8N300 66 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 NXT2Q9NPJ8 142 aaKnown RBP-0.14□□□□□ -2.43
PHC3-216ENST00000497171 ARL2-SNX15V9GYD0 113 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 DOPEY2Q9Y3R5 2298 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 HIVEP1P15822 2718 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 PAPPAQ13219 1627 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 MUC2Q02817 5179 aa-0.14□□□□□ -2.43
PHC3-216ENST00000497171 PKDREJQ9NTG1 2253 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 BCL9LQ86UU0 1499 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 NBEAL1Q6ZS30 2694 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 NALCNQ8IZF0 1738 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 APC2O95996 2303 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 AKAP6Q13023 2319 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 HERC1Q15751 4861 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 S100A1P23297 94 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 ATP5EP56381 51 aaPredicted RBP-0.15□□□□□ -2.43
PHC3-216ENST00000497171 SARNPP82979 210 aaKnown RBP-0.15□□□□□ -2.43
PHC3-216ENST00000497171 FDCSPQ8NFU4 85 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 DPH3P1Q9H4G8 78 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 MANBALQ9NQG1 85 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms