RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CSDC2Q9Y534 153 aaKnown RBP14.72□□□□□ -0.05
C9orf3-222ENST00000496567 IGLV4-60A0A075B6I1 120 aa14.71□□□□□ -0.05
C9orf3-222ENST00000496567 IBA57-AS1B1ANH7 110 aa14.71□□□□□ -0.05
C9orf3-222ENST00000496567 Q6ZR54 194 aa14.71□□□□□ -0.05
C9orf3-222ENST00000496567 SPANXA1Q9NS26 97 aa14.71□□□□□ -0.05
C9orf3-222ENST00000496567 KRTAP1-5Q9BYS1 174 aa14.7□□□□□ -0.06
C9orf3-222ENST00000496567 KMT2AQ03164 3969 aa14.69□□□□□ -0.06
C9orf3-222ENST00000496567 LOC105371267A0A1B0GV96 52 aa14.69□□□□□ -0.06
C9orf3-222ENST00000496567 IFITM10A6NMD0 228 aa14.69□□□□□ -0.06
C9orf3-222ENST00000496567 SACSQ9NZJ4 4579 aa14.69□□□□□ -0.06
C9orf3-222ENST00000496567 HSBP1O75506 76 aa14.68□□□□□ -0.06
C9orf3-222ENST00000496567 TOMM6Q96B49 74 aa14.68□□□□□ -0.06
C9orf3-222ENST00000496567 PYGO1Q9Y3Y4 419 aa14.68□□□□□ -0.06
C9orf3-222ENST00000496567 DNAH6Q9C0G6 4158 aa14.68□□□□□ -0.06
C9orf3-222ENST00000496567 S100A2P29034 98 aa14.68□□□□□ -0.06
C9orf3-222ENST00000496567 FAM19A2Q8N3H0 131 aa14.68□□□□□ -0.06
C9orf3-222ENST00000496567 KMT2CQ8NEZ4 4911 aaKnown RBP14.67□□□□□ -0.06
C9orf3-222ENST00000496567 CRPP02741 224 aa14.67□□□□□ -0.06
C9orf3-222ENST00000496567 PMCHL1Q16048 86 aa14.67□□□□□ -0.06
C9orf3-222ENST00000496567 LINC00269Q8N2A0 174 aa14.67□□□□□ -0.06
C9orf3-222ENST00000496567 CDC42SE2Q9NRR3 84 aa14.67□□□□□ -0.06
C9orf3-222ENST00000496567 TRAV8-3A0A0A6YYJ7 113 aa14.66□□□□□ -0.06
C9orf3-222ENST00000496567 ZNF664Q8N3J9 261 aa14.66□□□□□ -0.06
C9orf3-222ENST00000496567 UBE2WQ96B02 151 aa14.66□□□□□ -0.06
C9orf3-222ENST00000496567 HBDP02042 147 aa14.65□□□□□ -0.06
C9orf3-222ENST00000496567 HIST1H2BLQ99880 126 aa14.65□□□□□ -0.06
C9orf3-222ENST00000496567 PRR34Q9NV39 138 aa14.65□□□□□ -0.06
C9orf3-222ENST00000496567 NPSP0C0P6 89 aa14.64□□□□□ -0.07
C9orf3-222ENST00000496567 FABP4P15090 132 aa14.64□□□□□ -0.07
C9orf3-222ENST00000496567 MRPS36P82909 103 aaKnown RBP14.64□□□□□ -0.07
C9orf3-222ENST00000496567 REG3AQ06141 175 aa14.64□□□□□ -0.07
C9orf3-222ENST00000496567 ENHOQ6UWT2 76 aa14.64□□□□□ -0.07
C9orf3-222ENST00000496567 SCGB3A1Q96QR1 104 aa14.64□□□□□ -0.07
C9orf3-222ENST00000496567 TIMM17AQ99595 171 aa14.64□□□□□ -0.07
C9orf3-222ENST00000496567 HYDINQ4G0P3 5121 aa14.63□□□□□ -0.07
C9orf3-222ENST00000496567 A0A096LNJ9 63 aa14.63□□□□□ -0.07
C9orf3-222ENST00000496567 ERASQ7Z444 233 aa14.63□□□□□ -0.07
C9orf3-222ENST00000496567 NFE4Q86UQ8 179 aa14.63□□□□□ -0.07
C9orf3-222ENST00000496567 C6orf223Q8N319 242 aa14.63□□□□□ -0.07
C9orf3-222ENST00000496567 Q9HAA7 133 aa14.63□□□□□ -0.07
C9orf3-222ENST00000496567 IGIPA6NJ69 53 aa14.62□□□□□ -0.07
C9orf3-222ENST00000496567 MIAQ16674 131 aa14.62□□□□□ -0.07
C9orf3-222ENST00000496567 C1orf134Q5TEV5 83 aa14.62□□□□□ -0.07
C9orf3-222ENST00000496567 CLPSL2Q6UWE3 100 aa14.62□□□□□ -0.07
C9orf3-222ENST00000496567 Q6ZUT4 128 aa14.62□□□□□ -0.07
C9orf3-222ENST00000496567 PAPPA-AS1Q5QFB9 102 aa14.61□□□□□ -0.07
C9orf3-222ENST00000496567 RMI2Q96E14 147 aa14.61□□□□□ -0.07
C9orf3-222ENST00000496567 TMEM141Q96I45 108 aa14.61□□□□□ -0.07
C9orf3-222ENST00000496567 IGLV4-3A0A075B6K6 122 aa14.6□□□□□ -0.07
C9orf3-222ENST00000496567 Q6ZN92 141 aa14.6□□□□□ -0.07
C9orf3-222ENST00000496567 OPRPNQ99935 248 aaPredicted RBP14.6□□□□□ -0.07
C9orf3-222ENST00000496567 IGKV3OR2-268A0A0C4DH90 116 aa14.6□□□□□ -0.07
C9orf3-222ENST00000496567 TRAV8-4A0A0B4J246 113 aa14.59□□□□□ -0.07
C9orf3-222ENST00000496567 RNASE13Q5GAN3 156 aaKnown RBP14.59□□□□□ -0.07
C9orf3-222ENST00000496567 FAM104AQ969W3 186 aa14.59□□□□□ -0.07
C9orf3-222ENST00000496567 PACRGQ96M98 296 aaPredicted RBP14.59□□□□□ -0.07
C9orf3-222ENST00000496567 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-222ENST00000496567 C1orf43Q9BWL3 253 aa14.58□□□□□ -0.08
C9orf3-222ENST00000496567 TM2D2Q9BX73 214 aa14.58□□□□□ -0.08
C9orf3-222ENST00000496567 COX11Q9Y6N1 276 aa14.58□□□□□ -0.08
C9orf3-222ENST00000496567 TEX43Q6ZNM6 134 aa14.57□□□□□ -0.08
C9orf3-222ENST00000496567 OR10D4PQ8NGN7 298 aa14.57□□□□□ -0.08
C9orf3-222ENST00000496567 VCX2Q9H322 139 aa14.57□□□□□ -0.08
C9orf3-222ENST00000496567 RYR2Q92736 4967 aa14.56□□□□□ -0.08
C9orf3-222ENST00000496567 IGKV2D-24A0A075B6R9 120 aa14.56□□□□□ -0.08
C9orf3-222ENST00000496567 ATP5LO75964 103 aa14.56□□□□□ -0.08
C9orf3-222ENST00000496567 LINC00959A0A1B0GUT2 108 aa14.56□□□□□ -0.08
C9orf3-222ENST00000496567 CCL25O15444 150 aa14.56□□□□□ -0.08
C9orf3-222ENST00000496567 AKR1D1P51857 326 aa14.56□□□□□ -0.08
C9orf3-222ENST00000496567 SS18Q15532 418 aa14.55□□□□□ -0.08
C9orf3-222ENST00000496567 LINC00173Q6ZV60 143 aa14.55□□□□□ -0.08
C9orf3-222ENST00000496567 AMELXQ99217 191 aa14.55□□□□□ -0.08
C9orf3-222ENST00000496567 C2orf88Q9BSF0 95 aa14.55□□□□□ -0.08
C9orf3-222ENST00000496567 IGLV10-54A0A075B6I4 117 aa14.54□□□□□ -0.08
C9orf3-222ENST00000496567 LEPROTL1O95214 131 aa14.54□□□□□ -0.08
C9orf3-222ENST00000496567 TRAV13-1A0A0B4J241 112 aa14.53□□□□□ -0.08
C9orf3-222ENST00000496567 PSCAO43653 123 aa14.52□□□□□ -0.08
C9orf3-222ENST00000496567 Q6ZRN7 208 aaPredicted RBP14.52□□□□□ -0.08
C9orf3-222ENST00000496567 BAALCQ8WXS3 180 aa14.51□□□□□ -0.09
C9orf3-222ENST00000496567 CHCHD10Q8WYQ3 142 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-222ENST00000496567 IFI27L1Q96BM0 104 aa14.51□□□□□ -0.09
C9orf3-222ENST00000496567 HSPB8Q9UJY1 196 aa14.51□□□□□ -0.09
C9orf3-222ENST00000496567 PMVKQ15126 192 aa14.5□□□□□ -0.09
C9orf3-222ENST00000496567 ZC2HC1BQ5TFG8 222 aa14.5□□□□□ -0.09
C9orf3-222ENST00000496567 RTL8CO15255 209 aa14.49□□□□□ -0.09
C9orf3-222ENST00000496567 XCL1P47992 114 aa14.48□□□□□ -0.09
C9orf3-222ENST00000496567 KRTDAPP60985 99 aa14.48□□□□□ -0.09
C9orf3-222ENST00000496567 CST9LQ9H4G1 147 aa14.48□□□□□ -0.09
C9orf3-222ENST00000496567 DNAH2Q9P225 4427 aa14.48□□□□□ -0.09
C9orf3-222ENST00000496567 PRSS1P07477 247 aa14.47□□□□□ -0.09
C9orf3-222ENST00000496567 C3orf79P0CE67 100 aa14.47□□□□□ -0.09
C9orf3-222ENST00000496567 UBE2D1P51668 147 aa14.47□□□□□ -0.09
C9orf3-222ENST00000496567 KRTAP26-1Q6PEX3 210 aa14.47□□□□□ -0.09
C9orf3-222ENST00000496567 GAGE12HA6NDE8 117 aa14.47□□□□□ -0.09
C9orf3-222ENST00000496567 CD164L2Q6UWJ8 174 aa14.47□□□□□ -0.09
C9orf3-222ENST00000496567 PRSS29PA6NIE9 313 aa14.45□□□□□ -0.1
C9orf3-222ENST00000496567 SEC11AP67812 179 aa14.45□□□□□ -0.1
C9orf3-222ENST00000496567 LINC00336Q6ZUF6 198 aa14.45□□□□□ -0.1
C9orf3-222ENST00000496567 LINC00242Q5T6M2 205 aa14.44□□□□□ -0.1
C9orf3-222ENST00000496567 FAM19A3Q7Z5A8 133 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms