RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 TRBV6-5A0A0K0K1A5 114 aa7.4□□□□□ -1.22
HLA-DQA1-207ENST00000496318 ESDP10768 282 aa7.4□□□□□ -1.22
HLA-DQA1-207ENST00000496318 RPL37AP61513 92 aaKnown RBP7.4□□□□□ -1.22
HLA-DQA1-207ENST00000496318 FOXI1Q12951 378 aa7.4□□□□□ -1.22
HLA-DQA1-207ENST00000496318 TMEM241Q24JQ0 296 aa7.4□□□□□ -1.22
HLA-DQA1-207ENST00000496318 NRACQ8N912 160 aa7.4□□□□□ -1.22
HLA-DQA1-207ENST00000496318 CCL25O15444 150 aa7.39□□□□□ -1.23
HLA-DQA1-207ENST00000496318 CAMPP49913 170 aa7.39□□□□□ -1.23
HLA-DQA1-207ENST00000496318 POLR2KP53803 58 aaKnown RBP7.39□□□□□ -1.23
HLA-DQA1-207ENST00000496318 CNBPP62633 177 aaKnown RBP7.39□□□□□ -1.23
HLA-DQA1-207ENST00000496318 MRPL51Q4U2R6 128 aaKnown RBP7.39□□□□□ -1.23
HLA-DQA1-207ENST00000496318 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
HLA-DQA1-207ENST00000496318 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
HLA-DQA1-207ENST00000496318 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
HLA-DQA1-207ENST00000496318 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
HLA-DQA1-207ENST00000496318 COX6A2Q02221 97 aa7.38□□□□□ -1.23
HLA-DQA1-207ENST00000496318 MRPL54Q6P161 138 aaKnown RBP7.38□□□□□ -1.23
HLA-DQA1-207ENST00000496318 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
HLA-DQA1-207ENST00000496318 PRSS3P2Q8NHM4 247 aa7.38□□□□□ -1.23
HLA-DQA1-207ENST00000496318 NAT8Q9UHE5 227 aa7.38□□□□□ -1.23
HLA-DQA1-207ENST00000496318 IGHV3-64A0A075B6Q5 118 aa7.37□□□□□ -1.23
HLA-DQA1-207ENST00000496318 LINC00959A0A1B0GUT2 108 aa7.37□□□□□ -1.23
HLA-DQA1-207ENST00000496318 RIGQ13278 110 aa7.37□□□□□ -1.23
HLA-DQA1-207ENST00000496318 OR5A1Q8NGJ0 315 aa7.37□□□□□ -1.23
HLA-DQA1-207ENST00000496318 MRAP2Q96G30 205 aa7.37□□□□□ -1.23
HLA-DQA1-207ENST00000496318 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
HLA-DQA1-207ENST00000496318 A0A087WYN8 130 aa7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 TRBV27A0A0K0K1C4 114 aa7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 C7orf77A4D0Y5 90 aa7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 CIRBPQ14011 172 aaKnown RBP7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 FAM74A3Q4VXF1 159 aa7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 Q6ZUT4 128 aa7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 NAT8BQ9UHF3 227 aa7.36□□□□□ -1.23
HLA-DQA1-207ENST00000496318 A0A096LNI7 61 aa7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 GVQW2A0A096LPI5 108 aaPredicted RBP7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 SUMO2P61956 95 aaKnown RBP7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 RPL39P62891 51 aaKnown RBP7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 FAM104BQ5XKR9 115 aa7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 DPH3Q96FX2 82 aa7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 TMEM101Q96IK0 257 aa7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 BTF3L4Q96K17 158 aa7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 CDC42SE2Q9NRR3 84 aa7.35□□□□□ -1.23
HLA-DQA1-207ENST00000496318 H7C423 109 aa7.34□□□□□ -1.23
HLA-DQA1-207ENST00000496318 NPYP01303 97 aa7.34□□□□□ -1.23
HLA-DQA1-207ENST00000496318 ZNF25P17030 456 aaPredicted RBP7.34□□□□□ -1.23
HLA-DQA1-207ENST00000496318 FCER1GP30273 86 aa7.34□□□□□ -1.23
HLA-DQA1-207ENST00000496318 PEA15Q15121 130 aa7.34□□□□□ -1.23
HLA-DQA1-207ENST00000496318 MAJINQ3KP22 176 aa7.34□□□□□ -1.23
HLA-DQA1-207ENST00000496318 OPRPNQ99935 248 aaPredicted RBP7.34□□□□□ -1.23
HLA-DQA1-207ENST00000496318 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.33□□□□□ -1.24
HLA-DQA1-207ENST00000496318 D6R8Y8 96 aa7.33□□□□□ -1.24
HLA-DQA1-207ENST00000496318 PHOX2AO14813 284 aa7.33□□□□□ -1.24
HLA-DQA1-207ENST00000496318 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
HLA-DQA1-207ENST00000496318 ZNF664Q8N3J9 261 aa7.33□□□□□ -1.24
HLA-DQA1-207ENST00000496318 FAM104AQ969W3 186 aa7.33□□□□□ -1.24
HLA-DQA1-207ENST00000496318 UBE2D4Q9Y2X8 147 aa7.33□□□□□ -1.24
HLA-DQA1-207ENST00000496318 HMCN2Q8NDA2 5059 aa7.33□□□□□ -1.24
HLA-DQA1-207ENST00000496318 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
HLA-DQA1-207ENST00000496318 A0A1B0GXF2 115 aa7.32□□□□□ -1.24
HLA-DQA1-207ENST00000496318 VCYO14598 125 aa7.32□□□□□ -1.24
HLA-DQA1-207ENST00000496318 TCAPO15273 167 aa7.32□□□□□ -1.24
HLA-DQA1-207ENST00000496318 CKS2P33552 79 aa7.32□□□□□ -1.24
HLA-DQA1-207ENST00000496318 TNFRSF6BO95407 300 aa7.31□□□□□ -1.24
HLA-DQA1-207ENST00000496318 RAB14P61106 215 aa7.31□□□□□ -1.24
HLA-DQA1-207ENST00000496318 HBBP68871 147 aa7.31□□□□□ -1.24
HLA-DQA1-207ENST00000496318 ODF1Q14990 250 aa7.31□□□□□ -1.24
HLA-DQA1-207ENST00000496318 SS18Q15532 418 aa7.31□□□□□ -1.24
HLA-DQA1-207ENST00000496318 CFAP161Q6P656 301 aa7.31□□□□□ -1.24
HLA-DQA1-207ENST00000496318 C5orf38Q86SI9 138 aa7.31□□□□□ -1.24
HLA-DQA1-207ENST00000496318 CLLU1Q5K131 121 aa7.3□□□□□ -1.24
HLA-DQA1-207ENST00000496318 CD164L2Q6UWJ8 174 aa7.3□□□□□ -1.24
HLA-DQA1-207ENST00000496318 STPG4Q8N801 248 aa7.3□□□□□ -1.24
HLA-DQA1-207ENST00000496318 CARD19Q96LW7 228 aa7.3□□□□□ -1.24
HLA-DQA1-207ENST00000496318 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
HLA-DQA1-207ENST00000496318 PLAC8Q9NZF1 115 aa7.3□□□□□ -1.24
HLA-DQA1-207ENST00000496318 TNXBP22105 4242 aa7.29□□□□□ -1.24
HLA-DQA1-207ENST00000496318 IGLV4-69A0A075B6H9 119 aa7.29□□□□□ -1.24
HLA-DQA1-207ENST00000496318 IGHV1-58A0A0C4DH39 117 aa7.29□□□□□ -1.24
HLA-DQA1-207ENST00000496318 A0A0J9YXV3 536 aa7.29□□□□□ -1.24
HLA-DQA1-207ENST00000496318 Q6ZRU5 148 aa7.29□□□□□ -1.24
HLA-DQA1-207ENST00000496318 KIR2DL4Q99706 377 aa7.29□□□□□ -1.24
HLA-DQA1-207ENST00000496318 LOC389332A0A1B0GUA5 103 aa7.27□□□□□ -1.25
HLA-DQA1-207ENST00000496318 H3BS24 57 aa7.27□□□□□ -1.25
HLA-DQA1-207ENST00000496318 ZNF561-AS1K7EIQ3 104 aa7.27□□□□□ -1.25
HLA-DQA1-207ENST00000496318 COX7A2LO14548 114 aa7.27□□□□□ -1.25
HLA-DQA1-207ENST00000496318 PPP1R2P9O14990 202 aa7.27□□□□□ -1.25
HLA-DQA1-207ENST00000496318 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
HLA-DQA1-207ENST00000496318 SYCNQ0VAF6 134 aa7.27□□□□□ -1.25
HLA-DQA1-207ENST00000496318 ZC2HC1BQ5TFG8 222 aa7.27□□□□□ -1.25
HLA-DQA1-207ENST00000496318 TRBV24-1A0A075B6N3 115 aa7.26□□□□□ -1.25
HLA-DQA1-207ENST00000496318 MALP21145 153 aa7.26□□□□□ -1.25
HLA-DQA1-207ENST00000496318 GAGE2BQ13066 116 aa7.26□□□□□ -1.25
HLA-DQA1-207ENST00000496318 PRELID3AQ96N28 172 aa7.26□□□□□ -1.25
HLA-DQA1-207ENST00000496318 C20orf78Q9BR46 151 aa7.26□□□□□ -1.25
HLA-DQA1-207ENST00000496318 UBR4Q5T4S7 5183 aa7.26□□□□□ -1.25
HLA-DQA1-207ENST00000496318 A0A1B0GW15 77 aa7.25□□□□□ -1.25
HLA-DQA1-207ENST00000496318 LINC00862A6NCI5 91 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms