RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 ZNF25P17030 456 aaPredicted RBP6.47□□□□□ -1.37
CALD1-223ENST00000496024 RPL32P62910 135 aaKnown RBP6.47□□□□□ -1.37
CALD1-223ENST00000496024 CDPF1Q6NVV7 123 aa6.47□□□□□ -1.37
CALD1-223ENST00000496024 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
CALD1-223ENST00000496024 SLC7A5P1Q8MH63 180 aa6.47□□□□□ -1.37
CALD1-223ENST00000496024 MAP1LC3AQ9H492 121 aa6.47□□□□□ -1.37
CALD1-223ENST00000496024 APOBP04114 4563 aaKnown RBP6.47□□□□□ -1.37
CALD1-223ENST00000496024 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
CALD1-223ENST00000496024 GAGE12HA6NDE8 117 aa6.46□□□□□ -1.38
CALD1-223ENST00000496024 USP17L23D6RBM5 183 aa6.46□□□□□ -1.38
CALD1-223ENST00000496024 SNAPINO95295 136 aa6.46□□□□□ -1.38
CALD1-223ENST00000496024 RAB5AP20339 215 aa6.46□□□□□ -1.38
CALD1-223ENST00000496024 GCSHP23434 173 aa6.46□□□□□ -1.38
CALD1-223ENST00000496024 KRTAP10-1P60331 282 aa6.46□□□□□ -1.38
CALD1-223ENST00000496024 RPL39P62891 51 aaKnown RBP6.46□□□□□ -1.38
CALD1-223ENST00000496024 RNASE13Q5GAN3 156 aaKnown RBP6.46□□□□□ -1.38
CALD1-223ENST00000496024 SVBPQ8N300 66 aa6.46□□□□□ -1.38
CALD1-223ENST00000496024 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
CALD1-223ENST00000496024 TGIF2-C20orf24A0A0A6YYL0 155 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 SMAGPQ0VAQ4 97 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 LINC01620Q4KN68 170 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 MRPL52Q86TS9 123 aaKnown RBP6.45□□□□□ -1.38
CALD1-223ENST00000496024 ZNF664Q8N3J9 261 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 TMEM18Q96B42 140 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 CDC42SE2Q9NRR3 84 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 LAMTOR2Q9Y2Q5 125 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 DNAH8Q96JB1 4490 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 HSPG2P98160 4391 aa6.45□□□□□ -1.38
CALD1-223ENST00000496024 XCL1P47992 114 aa6.44□□□□□ -1.38
CALD1-223ENST00000496024 FABP9Q0Z7S8 132 aa6.44□□□□□ -1.38
CALD1-223ENST00000496024 C14orf177Q52M58 125 aa6.44□□□□□ -1.38
CALD1-223ENST00000496024 Q6ZUT4 128 aa6.44□□□□□ -1.38
CALD1-223ENST00000496024 Q8N8P6 123 aa6.44□□□□□ -1.38
CALD1-223ENST00000496024 CHCHD10Q8WYQ3 142 aaPredicted RBP6.44□□□□□ -1.38
CALD1-223ENST00000496024 GNB1LQ9BYB4 327 aa6.44□□□□□ -1.38
CALD1-223ENST00000496024 UBE2D4Q9Y2X8 147 aa6.44□□□□□ -1.38
CALD1-223ENST00000496024 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
CALD1-223ENST00000496024 CCL25O15444 150 aa6.43□□□□□ -1.38
CALD1-223ENST00000496024 PRSS1P07477 247 aa6.43□□□□□ -1.38
CALD1-223ENST00000496024 SS18Q15532 418 aa6.43□□□□□ -1.38
CALD1-223ENST00000496024 OPRPNQ99935 248 aaPredicted RBP6.43□□□□□ -1.38
CALD1-223ENST00000496024 MRPL18Q9H0U6 180 aaKnown RBP6.43□□□□□ -1.38
CALD1-223ENST00000496024 TRAV13-1A0A0B4J241 112 aa6.42□□□□□ -1.38
CALD1-223ENST00000496024 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
CALD1-223ENST00000496024 PRSS47A8MTI9 375 aa6.42□□□□□ -1.38
CALD1-223ENST00000496024 IFI27P40305 119 aaPredicted RBP6.42□□□□□ -1.38
CALD1-223ENST00000496024 HAMPP81172 84 aa6.42□□□□□ -1.38
CALD1-223ENST00000496024 COX19Q49B96 90 aa6.42□□□□□ -1.38
CALD1-223ENST00000496024 TIMM21Q9BVV7 248 aa6.42□□□□□ -1.38
CALD1-223ENST00000496024 CDK2AP2O75956 126 aa6.41□□□□□ -1.38
CALD1-223ENST00000496024 MT-ND6P03923 174 aa6.41□□□□□ -1.38
CALD1-223ENST00000496024 FOXI1Q12951 378 aa6.41□□□□□ -1.38
CALD1-223ENST00000496024 PRSS3P2Q8NHM4 247 aa6.41□□□□□ -1.38
CALD1-223ENST00000496024 ALKBH7Q9BT30 221 aaPredicted RBP6.41□□□□□ -1.38
CALD1-223ENST00000496024 NXT2Q9NPJ8 142 aaKnown RBP6.41□□□□□ -1.38
CALD1-223ENST00000496024 SPANXA1Q9NS26 97 aa6.41□□□□□ -1.38
CALD1-223ENST00000496024 CSDC2Q9Y534 153 aaKnown RBP6.41□□□□□ -1.38
CALD1-223ENST00000496024 HIGD2BQ4VC39 106 aa6.4□□□□□ -1.38
CALD1-223ENST00000496024 CYSLTR1Q9Y271 337 aa6.4□□□□□ -1.38
CALD1-223ENST00000496024 TRAPPC1Q9Y5R8 145 aa6.4□□□□□ -1.38
CALD1-223ENST00000496024 IFITM10A6NMD0 228 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 C1orf196B1AJZ1 125 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 XGP55808 180 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 ORMDL2Q53FV1 153 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 CFAP161Q6P656 301 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 C2orf66Q6UXQ4 117 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 CBLN2Q8IUK8 224 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 C15orf56Q8N910 161 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 FAM104AQ969W3 186 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 AP5S1Q9NUS5 200 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 FAM30AQ9NZY2 134 aa6.39□□□□□ -1.39
CALD1-223ENST00000496024 IGLV4-3A0A075B6K6 122 aa6.38□□□□□ -1.39
CALD1-223ENST00000496024 MRPS36P82909 103 aaKnown RBP6.38□□□□□ -1.39
CALD1-223ENST00000496024 ZC2HC1BQ5TFG8 222 aa6.38□□□□□ -1.39
CALD1-223ENST00000496024 CD164L2Q6UWJ8 174 aa6.38□□□□□ -1.39
CALD1-223ENST00000496024 SMCO4Q9NRQ5 59 aa6.38□□□□□ -1.39
CALD1-223ENST00000496024 K7EMI3 77 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 SMR3BP02814 79 aaPredicted RBP6.37□□□□□ -1.39
CALD1-223ENST00000496024 MALP21145 153 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 FA2HQ7L5A8 372 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 C5orf38Q86SI9 138 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 LINC00526Q96FQ7 95 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 TMEM141Q96I45 108 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 YPEL4Q96NS1 127 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 PYGO1Q9Y3Y4 419 aa6.37□□□□□ -1.39
CALD1-223ENST00000496024 IGHV1-58A0A0C4DH39 117 aa6.36□□□□□ -1.39
CALD1-223ENST00000496024 COX7A2LO14548 114 aa6.36□□□□□ -1.39
CALD1-223ENST00000496024 SLPIP03973 132 aa6.36□□□□□ -1.39
CALD1-223ENST00000496024 Q6ZN92 141 aa6.36□□□□□ -1.39
CALD1-223ENST00000496024 VPS13BQ7Z7G8 4022 aa6.35□□□□□ -1.39
CALD1-223ENST00000496024 GVQW2A0A096LPI5 108 aaPredicted RBP6.35□□□□□ -1.39
CALD1-223ENST00000496024 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.35□□□□□ -1.39
CALD1-223ENST00000496024 G0S2P27469 103 aa6.35□□□□□ -1.39
CALD1-223ENST00000496024 TEX43Q6ZNM6 134 aa6.35□□□□□ -1.39
CALD1-223ENST00000496024 C9orf163Q8N9P6 203 aa6.35□□□□□ -1.39
CALD1-223ENST00000496024 C18orf32Q8TCD1 76 aa6.35□□□□□ -1.39
CALD1-223ENST00000496024 TOMM6Q96B49 74 aa6.35□□□□□ -1.39
CALD1-223ENST00000496024 VCX2Q9H322 139 aa6.35□□□□□ -1.39
CALD1-223ENST00000496024 ABCA13Q86UQ4 5058 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms