RNA–Protein interactions for RNA: ENST00000495954.5

SCHIP1-208, Transcript of schwannomin interacting protein 1, humanhuman

TSL 2

Gene SCHIP1, Length 1,000 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCHIP1-208ENST00000495954 MRAP2Q96G30 205 aa7.54□□□□□ -1.2
SCHIP1-208ENST00000495954 KRTAP29-1A8MX34 341 aaPredicted RBP7.53□□□□□ -1.2
SCHIP1-208ENST00000495954 PRSS1P07477 247 aa7.53□□□□□ -1.2
SCHIP1-208ENST00000495954 REG3AQ06141 175 aa7.53□□□□□ -1.2
SCHIP1-208ENST00000495954 COX19Q49B96 90 aa7.53□□□□□ -1.2
SCHIP1-208ENST00000495954 FAM104BQ5XKR9 115 aa7.53□□□□□ -1.2
SCHIP1-208ENST00000495954 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
SCHIP1-208ENST00000495954 TRAV26-2A0A0B4J265 109 aa7.52□□□□□ -1.21
SCHIP1-208ENST00000495954 RAB4AP20338 218 aa7.52□□□□□ -1.21
SCHIP1-208ENST00000495954 DGAT2L7PQ6IED9 249 aa7.52□□□□□ -1.21
SCHIP1-208ENST00000495954 CBLN2Q8IUK8 224 aa7.52□□□□□ -1.21
SCHIP1-208ENST00000495954 C20orf203Q8NBC4 194 aa7.52□□□□□ -1.21
SCHIP1-208ENST00000495954 TGIF2-C20orf24A0A0A6YYL0 155 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 A0A1B0GUV1 79 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 PPP1R17O96001 155 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 MT-ND6P03923 174 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 CKS2P33552 79 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 NIT2Q9NQR4 276 aa7.51□□□□□ -1.21
SCHIP1-208ENST00000495954 IGLV4-60A0A075B6I1 120 aa7.5□□□□□ -1.21
SCHIP1-208ENST00000495954 IGLV10-54A0A075B6I4 117 aa7.5□□□□□ -1.21
SCHIP1-208ENST00000495954 TRBV24-1A0A075B6N3 115 aa7.5□□□□□ -1.21
SCHIP1-208ENST00000495954 NCR2O95944 276 aa7.5□□□□□ -1.21
SCHIP1-208ENST00000495954 PPBPP02775 128 aa7.5□□□□□ -1.21
SCHIP1-208ENST00000495954 MRPL51Q4U2R6 128 aaKnown RBP7.5□□□□□ -1.21
SCHIP1-208ENST00000495954 TMEM136Q6ZRR5 245 aa7.5□□□□□ -1.21
SCHIP1-208ENST00000495954 GNB1LQ9BYB4 327 aa7.5□□□□□ -1.21
SCHIP1-208ENST00000495954 TRAV8-4A0A0B4J246 113 aa7.49□□□□□ -1.21
SCHIP1-208ENST00000495954 D6R8Y8 96 aa7.49□□□□□ -1.21
SCHIP1-208ENST00000495954 SMKR1H3BMG3 65 aa7.49□□□□□ -1.21
SCHIP1-208ENST00000495954 APCSP02743 223 aa7.49□□□□□ -1.21
SCHIP1-208ENST00000495954 ORMDL3Q8N138 153 aa7.49□□□□□ -1.21
SCHIP1-208ENST00000495954 RPL39LQ96EH5 51 aaKnown RBP7.49□□□□□ -1.21
SCHIP1-208ENST00000495954 ST20Q9HBF5 79 aa7.49□□□□□ -1.21
SCHIP1-208ENST00000495954 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
SCHIP1-208ENST00000495954 AMTP48728 403 aa7.48□□□□□ -1.21
SCHIP1-208ENST00000495954 COTL1Q14019 142 aa7.48□□□□□ -1.21
SCHIP1-208ENST00000495954 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
SCHIP1-208ENST00000495954 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.48□□□□□ -1.21
SCHIP1-208ENST00000495954 UBE2L6O14933 153 aa7.47□□□□□ -1.21
SCHIP1-208ENST00000495954 FABP9Q0Z7S8 132 aa7.47□□□□□ -1.21
SCHIP1-208ENST00000495954 SDIM1Q6ZPB5 146 aa7.47□□□□□ -1.21
SCHIP1-208ENST00000495954 PRELID3AQ96N28 172 aa7.47□□□□□ -1.21
SCHIP1-208ENST00000495954 MRPL18Q9H0U6 180 aaKnown RBP7.47□□□□□ -1.21
SCHIP1-208ENST00000495954 TRAPPC1Q9Y5R8 145 aa7.47□□□□□ -1.21
SCHIP1-208ENST00000495954 TRBV6-5A0A0K0K1A5 114 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 hDV102S1A0JD36 115 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 SDHAF1A6NFY7 115 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 PANO1I0J062 215 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 PHOX2AO14813 284 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 SCO1O75880 301 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 TNFRSF6BO95407 300 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 PMCHP20382 165 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 RPS10P46783 165 aaKnown RBP7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 SUMO2P61956 95 aaKnown RBP7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 CNBPP62633 177 aaKnown RBP7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 YPEL4Q96NS1 127 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 C20orf78Q9BR46 151 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
SCHIP1-208ENST00000495954 I3L3M4 83 aa7.45□□□□□ -1.22
SCHIP1-208ENST00000495954 GAS8-AS1O95177 125 aa7.45□□□□□ -1.22
SCHIP1-208ENST00000495954 NPYP01303 97 aa7.45□□□□□ -1.22
SCHIP1-208ENST00000495954 NRACQ8N912 160 aa7.45□□□□□ -1.22
SCHIP1-208ENST00000495954 MAP1LC3AQ9H492 121 aa7.45□□□□□ -1.22
SCHIP1-208ENST00000495954 FAT3Q8TDW7 4589 aa7.44□□□□□ -1.22
SCHIP1-208ENST00000495954 VCYO14598 125 aa7.44□□□□□ -1.22
SCHIP1-208ENST00000495954 OXTP01178 125 aa7.44□□□□□ -1.22
SCHIP1-208ENST00000495954 FCER1GP30273 86 aa7.44□□□□□ -1.22
SCHIP1-208ENST00000495954 CIRBPQ14011 172 aaKnown RBP7.44□□□□□ -1.22
SCHIP1-208ENST00000495954 KIAA1644Q3SXP7 199 aa7.44□□□□□ -1.22
SCHIP1-208ENST00000495954 KIR2DL4Q99706 377 aa7.44□□□□□ -1.22
SCHIP1-208ENST00000495954 AP5S1Q9NUS5 200 aa7.44□□□□□ -1.22
SCHIP1-208ENST00000495954 IGHV3-64A0A075B6Q5 118 aa7.43□□□□□ -1.22
SCHIP1-208ENST00000495954 SLPIP03973 132 aa7.43□□□□□ -1.22
SCHIP1-208ENST00000495954 HNRNPA3P51991 378 aaKnown RBP7.43□□□□□ -1.22
SCHIP1-208ENST00000495954 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
SCHIP1-208ENST00000495954 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
SCHIP1-208ENST00000495954 SMIM2Q9BVW6 85 aa7.43□□□□□ -1.22
SCHIP1-208ENST00000495954 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 IGKV3OR2-268A0A0C4DH90 116 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 LOC389332A0A1B0GUA5 103 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 GAGE12HA6NDE8 117 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 H7C423 109 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 TCAPO15273 167 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 RAB5AP20339 215 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 SERTAD4-AS1Q5TG53 156 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 AMMECR1LQ6DCA0 310 aa7.42□□□□□ -1.22
SCHIP1-208ENST00000495954 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.41□□□□□ -1.22
SCHIP1-208ENST00000495954 IGKV2-29A2NJV5 120 aaPredicted RBP7.41□□□□□ -1.22
SCHIP1-208ENST00000495954 POLR2KP53803 58 aaKnown RBP7.41□□□□□ -1.22
SCHIP1-208ENST00000495954 RPL32P62910 135 aaKnown RBP7.41□□□□□ -1.22
SCHIP1-208ENST00000495954 RNASEKQ6P5S7 137 aaKnown RBP7.41□□□□□ -1.22
SCHIP1-208ENST00000495954 COLCA2A8K830 154 aa7.4□□□□□ -1.22
SCHIP1-208ENST00000495954 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
SCHIP1-208ENST00000495954 FGF6P10767 208 aa7.4□□□□□ -1.22
SCHIP1-208ENST00000495954 CFAP161Q6P656 301 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms