RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 CRYGDP07320 174 aa9.77□□□□□ -0.85
TFE3-205ENST00000495940 ZNF688P0C7X2 276 aa9.77□□□□□ -0.85
TFE3-205ENST00000495940 SCGB1D4Q6XE38 83 aa9.77□□□□□ -0.85
TFE3-205ENST00000495940 DYNLRB2Q8TF09 96 aa9.77□□□□□ -0.85
TFE3-205ENST00000495940 PLEKHB2Q96CS7 222 aa9.77□□□□□ -0.85
TFE3-205ENST00000495940 IGKV3-7A0A075B6H7 116 aa9.76□□□□□ -0.85
TFE3-205ENST00000495940 COTL1Q14019 142 aa9.76□□□□□ -0.85
TFE3-205ENST00000495940 RNF151Q2KHN1 245 aa9.76□□□□□ -0.85
TFE3-205ENST00000495940 DEFB135Q30KP9 77 aa9.76□□□□□ -0.85
TFE3-205ENST00000495940 LINC00336Q6ZUF6 198 aa9.76□□□□□ -0.85
TFE3-205ENST00000495940 DNAJC30Q96LL9 226 aa9.76□□□□□ -0.85
TFE3-205ENST00000495940 SPXQ9BT56 116 aa9.76□□□□□ -0.85
TFE3-205ENST00000495940 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
TFE3-205ENST00000495940 TRAV25A0A0B4J276 109 aa9.75□□□□□ -0.85
TFE3-205ENST00000495940 CMC4P56277 68 aaPredicted RBP9.75□□□□□ -0.85
TFE3-205ENST00000495940 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
TFE3-205ENST00000495940 ZNF56Q15929 161 aa9.75□□□□□ -0.85
TFE3-205ENST00000495940 AMTNQ6UX39 209 aa9.75□□□□□ -0.85
TFE3-205ENST00000495940 C20orf203Q8NBC4 194 aa9.75□□□□□ -0.85
TFE3-205ENST00000495940 VCX2Q9H322 139 aa9.75□□□□□ -0.85
TFE3-205ENST00000495940 TRBV20-1A0A075B6N2 111 aa9.74□□□□□ -0.85
TFE3-205ENST00000495940 LEPROTO15243 131 aa9.74□□□□□ -0.85
TFE3-205ENST00000495940 UBE2D1P51668 147 aa9.74□□□□□ -0.85
TFE3-205ENST00000495940 TCTAP57738 103 aa9.74□□□□□ -0.85
TFE3-205ENST00000495940 ZNF415Q09FC8 603 aa9.74□□□□□ -0.85
TFE3-205ENST00000495940 DEFB114Q30KQ6 69 aa9.74□□□□□ -0.85
TFE3-205ENST00000495940 ATP6V0E2Q8NHE4 81 aa9.74□□□□□ -0.85
TFE3-205ENST00000495940 M0R2P5 195 aa9.73□□□□□ -0.85
TFE3-205ENST00000495940 SPRY2O43597 315 aa9.73□□□□□ -0.85
TFE3-205ENST00000495940 TSHBP01222 138 aa9.73□□□□□ -0.85
TFE3-205ENST00000495940 LGALS3P17931 250 aaKnown RBP9.73□□□□□ -0.85
TFE3-205ENST00000495940 SLC25A29Q8N8R3 303 aa9.73□□□□□ -0.85
TFE3-205ENST00000495940 TTTY13Q9BZ97 58 aa9.73□□□□□ -0.85
TFE3-205ENST00000495940 DEFB1P60022 68 aa9.72□□□□□ -0.85
TFE3-205ENST00000495940 SMAGPQ0VAQ4 97 aa9.72□□□□□ -0.85
TFE3-205ENST00000495940 GAGE13Q4V321 117 aa9.72□□□□□ -0.85
TFE3-205ENST00000495940 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
TFE3-205ENST00000495940 A0A087WWL8 130 aa9.71□□□□□ -0.86
TFE3-205ENST00000495940 A0A0J9YY99 117 aa9.71□□□□□ -0.86
TFE3-205ENST00000495940 SCGB1A1P11684 91 aa9.71□□□□□ -0.86
TFE3-205ENST00000495940 NANOS2P60321 138 aaKnown RBP9.71□□□□□ -0.86
TFE3-205ENST00000495940 TMEM61Q8N0U2 210 aa9.71□□□□□ -0.86
TFE3-205ENST00000495940 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.7□□□□□ -0.86
TFE3-205ENST00000495940 TMEM238C9JI98 176 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 H3BMM0 161 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 J3QQQ9 107 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 M0QXV9 152 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 RTL8CO15255 209 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 RPL24P83731 157 aaKnown RBP9.7□□□□□ -0.86
TFE3-205ENST00000495940 SPINK13Q1W4C9 94 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 TMEM170BQ5T4T1 132 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 FAM74A4Q5TZK3 123 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 RNF183Q96D59 192 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
TFE3-205ENST00000495940 TMEM223A0PJW6 202 aa9.69□□□□□ -0.86
TFE3-205ENST00000495940 K7ERJ3 54 aa9.69□□□□□ -0.86
TFE3-205ENST00000495940 MRPL16Q9NX20 251 aaKnown RBP9.69□□□□□ -0.86
TFE3-205ENST00000495940 CIDEAO60543 219 aa9.68□□□□□ -0.86
TFE3-205ENST00000495940 MORN3Q6PF18 240 aaPredicted RBP9.68□□□□□ -0.86
TFE3-205ENST00000495940 AMELXQ99217 191 aa9.68□□□□□ -0.86
TFE3-205ENST00000495940 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
TFE3-205ENST00000495940 JPT2Q9H910 190 aa9.68□□□□□ -0.86
TFE3-205ENST00000495940 AGRNO00468 2067 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 TRAV12-2A0A075B6T6 113 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 H3BMG7 143 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 INSP01308 110 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 APOC4P55056 127 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 UBE2D3P61077 147 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 UBE2D2P62837 147 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 RPL39P62891 51 aaKnown RBP9.67□□□□□ -0.86
TFE3-205ENST00000495940 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
TFE3-205ENST00000495940 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 APLNQ9ULZ1 77 aa9.67□□□□□ -0.86
TFE3-205ENST00000495940 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
TFE3-205ENST00000495940 A0A0B4J2C4 111 aa9.66□□□□□ -0.86
TFE3-205ENST00000495940 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
TFE3-205ENST00000495940 P0DMU3 169 aa9.66□□□□□ -0.86
TFE3-205ENST00000495940 FAM231AP0DMU4 169 aa9.66□□□□□ -0.86
TFE3-205ENST00000495940 FAM231CP0DMU5 169 aa9.66□□□□□ -0.86
TFE3-205ENST00000495940 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
TFE3-205ENST00000495940 DEFB131AP59861 70 aa9.66□□□□□ -0.86
TFE3-205ENST00000495940 NAA38Q9BRA0 125 aaKnown RBP9.66□□□□□ -0.86
TFE3-205ENST00000495940 LRP1BQ9NZR2 4599 aa9.65□□□□□ -0.86
TFE3-205ENST00000495940 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
TFE3-205ENST00000495940 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
TFE3-205ENST00000495940 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.86
TFE3-205ENST00000495940 ZNRF2Q8NHG8 242 aa9.65□□□□□ -0.86
TFE3-205ENST00000495940 COPS9Q8WXC6 57 aa9.65□□□□□ -0.86
TFE3-205ENST00000495940 PRO1854Q9UHT4 67 aa9.65□□□□□ -0.86
TFE3-205ENST00000495940 RS1O15537 224 aa9.64□□□□□ -0.87
TFE3-205ENST00000495940 TIMM17BO60830 172 aa9.64□□□□□ -0.87
TFE3-205ENST00000495940 IGKV3-20P01619 116 aa9.64□□□□□ -0.87
TFE3-205ENST00000495940 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
TFE3-205ENST00000495940 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
TFE3-205ENST00000495940 PRO0461Q9UI25 63 aa9.64□□□□□ -0.87
TFE3-205ENST00000495940 A0A0J9YXY3 114 aa9.63□□□□□ -0.87
TFE3-205ENST00000495940 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
TFE3-205ENST00000495940 M0R2N4 97 aa9.63□□□□□ -0.87
TFE3-205ENST00000495940 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
TFE3-205ENST00000495940 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms