RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 HIST1H2BDP58876 126 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 HIST1H2BCP62807 126 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 HIST2H2BEQ16778 126 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 NEGR1Q7Z3B1 354 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 ZNRF2Q8NHG8 242 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 C18orf32Q8TCD1 76 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 DEFB104AQ8WTQ1 72 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 HIST1H2BHQ93079 126 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 HIST1H2BNQ99877 126 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 HIST1H2BMQ99879 126 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 PRADC1Q9BSG0 188 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 ST20Q9HBF5 79 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 LAMTOR2Q9Y2Q5 125 aa3.79□□□□□ -1.8
GAPVD1-218ENST00000495588 DNAH9Q9NYC9 4486 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 IGLV2-18A0A075B6J9 118 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 TRBV7-3A0A075B6L6 115 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 A0A096LPF7 62 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 IGHV3-38A0A0C4DH36 116 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 TRBV6-5A0A0K0K1A5 114 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 SDHAF1A6NFY7 115 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 IFI27P40305 119 aaPredicted RBP3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 POLR2KP53803 58 aaKnown RBP3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 UBE2D3P61077 147 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 UBE2D2P62837 147 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 DNAJC30Q96LL9 226 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 C20orf78Q9BR46 151 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 TMEM70Q9BUB7 260 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 SMIM2Q9BVW6 85 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 MAP1LC3AQ9H492 121 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 TENM3Q9P273 2699 aa3.78□□□□□ -1.8
GAPVD1-218ENST00000495588 TRBV27A0A0K0K1C4 114 aa3.77□□□□□ -1.81
GAPVD1-218ENST00000495588 H3BNG1 76 aa3.77□□□□□ -1.81
GAPVD1-218ENST00000495588 TCAPO15273 167 aa3.77□□□□□ -1.81
GAPVD1-218ENST00000495588 PPP1R17O96001 155 aa3.77□□□□□ -1.81
GAPVD1-218ENST00000495588 RAB5BP61020 215 aa3.77□□□□□ -1.81
GAPVD1-218ENST00000495588 Q0VG73 95 aa3.77□□□□□ -1.81
GAPVD1-218ENST00000495588 Q6ZVQ6 151 aa3.77□□□□□ -1.81
GAPVD1-218ENST00000495588 ICOSQ9Y6W8 199 aa3.77□□□□□ -1.81
GAPVD1-218ENST00000495588 NBEAL2Q6ZNJ1 2754 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 IGLL5B9A064 214 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 I3L3M4 83 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 NUPR1O60356 82 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 PMCHP20382 165 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 NDUFA6P56556 154 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 RPL32P62910 135 aaKnown RBP3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 MRPL23Q16540 153 aaKnown RBP3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 RNASEKQ6P5S7 137 aaKnown RBP3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 CEMP1Q6PRD7 247 aaPredicted RBP3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 NTM-AS1Q6ZSK4 140 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 DAZ4Q86SG3 579 aaKnown RBP3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 NIT1Q86X76 327 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 BAGE3Q86Y29 109 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 Q8N8P6 123 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 ATP6V0E2Q8NHE4 81 aa3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 NXT2Q9NPJ8 142 aaKnown RBP3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 DAZ3Q9NR90 486 aaKnown RBP3.76□□□□□ -1.81
GAPVD1-218ENST00000495588 NUPR2A6NF83 97 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 LINC01546A6NGU7 62 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 SERF1AO75920 110 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 LINC00614P0C842 121 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 PMCHL1Q16048 86 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 ZFAND6Q6FIF0 208 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 FA2HQ7L5A8 372 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 C15orf53Q8NAA6 179 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 MUC7Q8TAX7 377 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 KIR2DL4Q99706 377 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 CHCHD7Q9BUK0 85 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 GTSF1LQ9H1H1 148 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 APLNQ9ULZ1 77 aa3.75□□□□□ -1.81
GAPVD1-218ENST00000495588 A0A096LNJ9 63 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 TRBV6-8A0A0A6YYG3 113 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 FCER1GP30273 86 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 COTL1Q14019 142 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 LAGE3Q14657 143 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 ESRGQ1W209 222 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 PDZD11Q5EBL8 140 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 COA6Q5JTJ3 125 aaKnown RBP3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 LYPD5Q6UWN5 251 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 SH2D6Q7Z4S9 175 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 FAM19A2Q8N3H0 131 aa3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 CHCHD1Q96BP2 118 aaKnown RBP3.74□□□□□ -1.81
GAPVD1-218ENST00000495588 MEGF8Q7Z7M0 2845 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 TRBV25-1A0A075B6N4 114 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 IGHV1-24A0A0C4DH33 117 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 IGKV2-29A2NJV5 120 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 K7EMI3 77 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 HSBP1O75506 76 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 S100A6P06703 90 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 ESDP10768 282 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 RPL39P62891 51 aaKnown RBP3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 ORMDL2Q53FV1 153 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 LELP1Q5T871 98 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 KLK5Q9Y337 293 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 FBN3Q75N90 2809 aa3.73□□□□□ -1.81
GAPVD1-218ENST00000495588 HBDP02042 147 aa3.72□□□□□ -1.81
GAPVD1-218ENST00000495588 TMEM97Q5BJF2 176 aa3.72□□□□□ -1.81
GAPVD1-218ENST00000495588 CASC10Q5T4H9 136 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms