RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 TTC32Q5I0X7 151 aa4.32□□□□□ -1.72
VIM-207ENST00000495528 ZFP82Q8N141 532 aa4.32□□□□□ -1.72
VIM-207ENST00000495528 C14orf178Q8N769 122 aaPredicted RBP4.32□□□□□ -1.72
VIM-207ENST00000495528 BTF3L4Q96K17 158 aa4.32□□□□□ -1.72
VIM-207ENST00000495528 UPK3BQ9BT76 320 aa4.32□□□□□ -1.72
VIM-207ENST00000495528 SAMD10Q9BYL1 202 aa4.32□□□□□ -1.72
VIM-207ENST00000495528 EVI2AP22794 236 aa4.31□□□□□ -1.72
VIM-207ENST00000495528 CTRLP40313 264 aa4.31□□□□□ -1.72
VIM-207ENST00000495528 SMIM15Q7Z3B0 74 aa4.31□□□□□ -1.72
VIM-207ENST00000495528 LINC00612Q8N6U2 182 aa4.31□□□□□ -1.72
VIM-207ENST00000495528 OR4C5Q8NGB2 326 aa4.31□□□□□ -1.72
VIM-207ENST00000495528 PTH2Q96A98 100 aa4.31□□□□□ -1.72
VIM-207ENST00000495528 TRAV9-1A0A075B6T8 112 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 COLCA2A8K830 154 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 A8MWV9 139 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 RS1O15537 224 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 CRYGDP07320 174 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 TRGC1P0CF51 173 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 SMIM17P0DL12 118 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 LINC00315P59091 139 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 HBBP68871 147 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 Q5VSD8 79 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 CFAP126Q5VTH2 177 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
VIM-207ENST00000495528 YPEL4Q96NS1 127 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 MRPS16Q9Y3D3 137 aaKnown RBP4.3□□□□□ -1.72
VIM-207ENST00000495528 MYCBP2O75592 4640 aa4.3□□□□□ -1.72
VIM-207ENST00000495528 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
VIM-207ENST00000495528 TRBV24-1A0A075B6N3 115 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 A0A096LPF7 62 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 TRAV4A0A0B4J268 109 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 TRGV4A0A0C4DH28 118 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 A0A1B0GW15 77 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 A0A1B0GXF2 115 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 H3BNG1 76 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 SMR3BP02814 79 aaPredicted RBP4.29□□□□□ -1.72
VIM-207ENST00000495528 S100A8P05109 93 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 MGPP08493 103 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 RAB4AP20338 218 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 FABP9Q0Z7S8 132 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 ATP5L2Q7Z4Y8 100 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.29□□□□□ -1.72
VIM-207ENST00000495528 TYMSOSQ8TAI1 123 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 VSIG2Q96IQ7 327 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 TMEM191AQ9H0A3 160 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 DPH3P1Q9H4G8 78 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 KIF25-AS1Q9Y6Z4 181 aa4.29□□□□□ -1.72
VIM-207ENST00000495528 RPS10P46783 165 aaKnown RBP4.28□□□□□ -1.72
VIM-207ENST00000495528 MRPL51Q4U2R6 128 aaKnown RBP4.28□□□□□ -1.72
VIM-207ENST00000495528 FAM104BQ5XKR9 115 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 RASL11AQ6T310 242 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 TMEM136Q6ZRR5 245 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 AMN1Q8IY45 258 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 FRZBQ92765 325 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 RNF185Q96GF1 192 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 AP1S3Q96PC3 154 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 GNB1LQ9BYB4 327 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 HHLA3Q9XRX5 114 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 TRAPPC1Q9Y5R8 145 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 VPS13BQ7Z7G8 4022 aa4.28□□□□□ -1.72
VIM-207ENST00000495528 FLG2Q5D862 2391 aaPredicted RBP4.27□□□□□ -1.73
VIM-207ENST00000495528 TRAV26-2A0A0B4J265 109 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 SMKR1H3BMG3 65 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 SIVA1O15304 175 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 APCSP02743 223 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 DNAH10OSP0CZ25 163 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 RAB5AP20339 215 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 CKS2P33552 79 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 ZNF56Q15929 161 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 COX19Q49B96 90 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 UFSP1Q6NVU6 142 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 CD164L2Q6UWJ8 174 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 ZFP2Q6ZN57 461 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 SLC25A29Q8N8R3 303 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 GATD1Q8NB37 220 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 Q9UF83 564 aa4.27□□□□□ -1.73
VIM-207ENST00000495528 A0A087WTM6 91 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 LOC100131303A0A0U1RQF7 123 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 HLA-DQA1P01909 254 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 TRGC2P03986 189 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 CRYBA4P53673 196 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 HAMPP81172 84 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 SLAQ13239 276 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 C18orf15Q96N68 181 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 PRO0255Q9UI72 69 aa4.26□□□□□ -1.73
VIM-207ENST00000495528 LOC389332A0A1B0GUA5 103 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 D6R8Y8 96 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 M0QY20 66 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 PHOX2AO14813 284 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 NCR2O95944 276 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 MT-ND6P03923 174 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 LYPD5Q6UWN5 251 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 DEFB104AQ8WTQ1 72 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 RPL39LQ96EH5 51 aaKnown RBP4.25□□□□□ -1.73
VIM-207ENST00000495528 MRAP2Q96G30 205 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 PRELID3AQ96N28 172 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 PRADC1Q9BSG0 188 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms