RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 UBE2D4Q9Y2X8 147 aa11.44□□□□□ -0.58
HDAC6-235ENST00000495515 COLCA2A8K830 154 aa11.43□□□□□ -0.58
HDAC6-235ENST00000495515 ATP6V1G1O75348 118 aa11.43□□□□□ -0.58
HDAC6-235ENST00000495515 TNP2Q05952 138 aa11.43□□□□□ -0.58
HDAC6-235ENST00000495515 ZNF664Q8N3J9 261 aa11.43□□□□□ -0.58
HDAC6-235ENST00000495515 CYSLTR1Q9Y271 337 aa11.43□□□□□ -0.58
HDAC6-235ENST00000495515 SCO1O75880 301 aa11.42□□□□□ -0.58
HDAC6-235ENST00000495515 RPL39P62891 51 aaKnown RBP11.42□□□□□ -0.58
HDAC6-235ENST00000495515 CDC42SE2Q9NRR3 84 aa11.42□□□□□ -0.58
HDAC6-235ENST00000495515 RAB5BP61020 215 aa11.41□□□□□ -0.58
HDAC6-235ENST00000495515 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
HDAC6-235ENST00000495515 C18orf32Q8TCD1 76 aa11.41□□□□□ -0.58
HDAC6-235ENST00000495515 IGKV3OR2-268A0A0C4DH90 116 aa11.4□□□□□ -0.58
HDAC6-235ENST00000495515 LINC01549A6NIU2 74 aa11.4□□□□□ -0.58
HDAC6-235ENST00000495515 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
HDAC6-235ENST00000495515 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
HDAC6-235ENST00000495515 TRGC2P03986 189 aa11.39□□□□□ -0.59
HDAC6-235ENST00000495515 AP5S1Q9NUS5 200 aa11.39□□□□□ -0.59
HDAC6-235ENST00000495515 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
HDAC6-235ENST00000495515 LINC00614P0C842 121 aa11.38□□□□□ -0.59
HDAC6-235ENST00000495515 MRPS36P82909 103 aaKnown RBP11.38□□□□□ -0.59
HDAC6-235ENST00000495515 SS18Q15532 418 aa11.38□□□□□ -0.59
HDAC6-235ENST00000495515 A0A087WTM6 91 aa11.37□□□□□ -0.59
HDAC6-235ENST00000495515 CCL25O15444 150 aa11.37□□□□□ -0.59
HDAC6-235ENST00000495515 NPSP0C0P6 89 aa11.37□□□□□ -0.59
HDAC6-235ENST00000495515 Q6ZUT4 128 aa11.37□□□□□ -0.59
HDAC6-235ENST00000495515 PAPPA-AS1Q5QFB9 102 aa11.36□□□□□ -0.59
HDAC6-235ENST00000495515 Q6ZN92 141 aa11.36□□□□□ -0.59
HDAC6-235ENST00000495515 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
HDAC6-235ENST00000495515 LINC00959A0A1B0GUT2 108 aa11.35□□□□□ -0.59
HDAC6-235ENST00000495515 CHCHD10Q8WYQ3 142 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-235ENST00000495515 TMEM141Q96I45 108 aa11.35□□□□□ -0.59
HDAC6-235ENST00000495515 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
HDAC6-235ENST00000495515 LRCOL1A6NCL2 159 aa11.34□□□□□ -0.59
HDAC6-235ENST00000495515 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
HDAC6-235ENST00000495515 RNASE13Q5GAN3 156 aaKnown RBP11.34□□□□□ -0.59
HDAC6-235ENST00000495515 BAGE3Q86Y29 109 aa11.34□□□□□ -0.59
HDAC6-235ENST00000495515 MAPKAPK5-AS1Q8N8E1 139 aa11.34□□□□□ -0.59
HDAC6-235ENST00000495515 BAALCQ8WXS3 180 aa11.34□□□□□ -0.59
HDAC6-235ENST00000495515 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
HDAC6-235ENST00000495515 DNAH2Q9P225 4427 aa11.34□□□□□ -0.59
HDAC6-235ENST00000495515 IGLV4-3A0A075B6K6 122 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 TRAV13-1A0A0B4J241 112 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 C14orf177Q52M58 125 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 KRTAP26-1Q6PEX3 210 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 TEX43Q6ZNM6 134 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 ERASQ7Z444 233 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 CHCHD1Q96BP2 118 aaKnown RBP11.33□□□□□ -0.6
HDAC6-235ENST00000495515 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 FRAS1Q86XX4 4008 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 DNAH10Q8IVF4 4471 aa11.33□□□□□ -0.6
HDAC6-235ENST00000495515 GAGE12HA6NDE8 117 aa11.32□□□□□ -0.6
HDAC6-235ENST00000495515 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
HDAC6-235ENST00000495515 IFITM10A6NMD0 228 aa11.32□□□□□ -0.6
HDAC6-235ENST00000495515 URB1-AS1Q96HZ7 61 aa11.32□□□□□ -0.6
HDAC6-235ENST00000495515 OPRPNQ99935 248 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-235ENST00000495515 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
HDAC6-235ENST00000495515 VCX2Q9H322 139 aa11.32□□□□□ -0.6
HDAC6-235ENST00000495515 HBDP02042 147 aa11.31□□□□□ -0.6
HDAC6-235ENST00000495515 XCL1P47992 114 aa11.31□□□□□ -0.6
HDAC6-235ENST00000495515 SPATA12Q7Z6I5 190 aa11.31□□□□□ -0.6
HDAC6-235ENST00000495515 Q8N814 137 aa11.31□□□□□ -0.6
HDAC6-235ENST00000495515 PGPEP1Q9NXJ5 209 aa11.31□□□□□ -0.6
HDAC6-235ENST00000495515 LECT2O14960 151 aa11.3□□□□□ -0.6
HDAC6-235ENST00000495515 CFAP161Q6P656 301 aa11.3□□□□□ -0.6
HDAC6-235ENST00000495515 CD164L2Q6UWJ8 174 aa11.3□□□□□ -0.6
HDAC6-235ENST00000495515 FAM104AQ969W3 186 aa11.3□□□□□ -0.6
HDAC6-235ENST00000495515 USP17L23D6RBM5 183 aa11.29□□□□□ -0.6
HDAC6-235ENST00000495515 CDPF1Q6NVV7 123 aa11.29□□□□□ -0.6
HDAC6-235ENST00000495515 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-235ENST00000495515 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-235ENST00000495515 HSBP1O75506 76 aa11.28□□□□□ -0.6
HDAC6-235ENST00000495515 FOXI1Q12951 378 aa11.28□□□□□ -0.6
HDAC6-235ENST00000495515 WFDC2Q14508 124 aa11.28□□□□□ -0.6
HDAC6-235ENST00000495515 AMELXQ99217 191 aa11.28□□□□□ -0.6
HDAC6-235ENST00000495515 DNAH17Q9UFH2 4485 aa11.27□□□□□ -0.6
HDAC6-235ENST00000495515 ATP5LO75964 103 aa11.26□□□□□ -0.61
HDAC6-235ENST00000495515 PMCHL1Q16048 86 aa11.26□□□□□ -0.61
HDAC6-235ENST00000495515 A0A096LNJ9 63 aa11.25□□□□□ -0.61
HDAC6-235ENST00000495515 COX7A2LO14548 114 aa11.25□□□□□ -0.61
HDAC6-235ENST00000495515 SEC11AP67812 179 aa11.25□□□□□ -0.61
HDAC6-235ENST00000495515 IGLV5-52A0A0A0MRZ9 124 aa11.24□□□□□ -0.61
HDAC6-235ENST00000495515 SERF1AO75920 110 aa11.24□□□□□ -0.61
HDAC6-235ENST00000495515 MALP21145 153 aa11.24□□□□□ -0.61
HDAC6-235ENST00000495515 UBE2D1P51668 147 aa11.24□□□□□ -0.61
HDAC6-235ENST00000495515 KRTAP10-2P60368 255 aa11.24□□□□□ -0.61
HDAC6-235ENST00000495515 PDZD11Q5EBL8 140 aa11.24□□□□□ -0.61
HDAC6-235ENST00000495515 LINC00173Q6ZV60 143 aa11.24□□□□□ -0.61
HDAC6-235ENST00000495515 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-235ENST00000495515 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 C16orf90A8MZG2 172 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 PMVKQ15126 192 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
HDAC6-235ENST00000495515 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms