RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 PRADC1Q9BSG0 188 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 IGKV2D-26A0A0A0MRZ7 120 aa11.53□□□□□ -0.56
CBX4-204ENST00000495122 H7C423 109 aa11.53□□□□□ -0.56
CBX4-204ENST00000495122 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
CBX4-204ENST00000495122 ZNRF2Q8NHG8 242 aa11.53□□□□□ -0.56
CBX4-204ENST00000495122 UBE2D4Q9Y2X8 147 aa11.53□□□□□ -0.56
CBX4-204ENST00000495122 CSDC2Q9Y534 153 aaKnown RBP11.53□□□□□ -0.56
CBX4-204ENST00000495122 X6R8D5 127 aa11.53□□□□□ -0.56
CBX4-204ENST00000495122 TENM2Q9NT68 2774 aa11.53□□□□□ -0.56
CBX4-204ENST00000495122 TRGV4A0A0C4DH28 118 aa11.52□□□□□ -0.57
CBX4-204ENST00000495122 CASC10Q5T4H9 136 aa11.52□□□□□ -0.57
CBX4-204ENST00000495122 RYR2Q92736 4967 aa11.52□□□□□ -0.57
CBX4-204ENST00000495122 TRBV25-1A0A075B6N4 114 aa11.5□□□□□ -0.57
CBX4-204ENST00000495122 MYMXA0A1B0GTQ4 84 aa11.5□□□□□ -0.57
CBX4-204ENST00000495122 A6NDN8 102 aa11.5□□□□□ -0.57
CBX4-204ENST00000495122 MIFP14174 115 aa11.5□□□□□ -0.57
CBX4-204ENST00000495122 CHAC1Q9BUX1 264 aa11.5□□□□□ -0.57
CBX4-204ENST00000495122 LINC00694P0DN24 101 aa11.49□□□□□ -0.57
CBX4-204ENST00000495122 FHL2Q14192 279 aa11.49□□□□□ -0.57
CBX4-204ENST00000495122 ORAOV1Q8WV07 137 aa11.49□□□□□ -0.57
CBX4-204ENST00000495122 TRAV8-6A0A0B4J262 113 aa11.48□□□□□ -0.57
CBX4-204ENST00000495122 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
CBX4-204ENST00000495122 TINCRA0A1B0GVN0 87 aa11.48□□□□□ -0.57
CBX4-204ENST00000495122 PHLDA1Q8WV24 401 aaPredicted RBP11.48□□□□□ -0.57
CBX4-204ENST00000495122 SPATA25Q9BR10 227 aa11.48□□□□□ -0.57
CBX4-204ENST00000495122 TP73-AS1Q9UF72 201 aa11.48□□□□□ -0.57
CBX4-204ENST00000495122 Q9UF83 564 aa11.48□□□□□ -0.57
CBX4-204ENST00000495122 GAGE12JA6NER3 117 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 ZNF25P17030 456 aaPredicted RBP11.47□□□□□ -0.57
CBX4-204ENST00000495122 GAGE1Q13065 139 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 GAGE4Q13068 117 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 GAGE5Q13069 117 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 GAGE13Q4V321 117 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 TMEM170BQ5T4T1 132 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 DGAT2L7PQ6IED9 249 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 FAM19A3Q7Z5A8 133 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 PLEKHB2Q96CS7 222 aa11.47□□□□□ -0.57
CBX4-204ENST00000495122 TMEM223A0PJW6 202 aa11.46□□□□□ -0.57
CBX4-204ENST00000495122 LEPROTO15243 131 aa11.46□□□□□ -0.57
CBX4-204ENST00000495122 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
CBX4-204ENST00000495122 RNF183Q96D59 192 aa11.46□□□□□ -0.57
CBX4-204ENST00000495122 TMEM243Q9BU79 118 aa11.46□□□□□ -0.57
CBX4-204ENST00000495122 DNAH1Q9P2D7 4330 aa11.45□□□□□ -0.58
CBX4-204ENST00000495122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
CBX4-204ENST00000495122 IGHV3-38A0A0C4DH36 116 aa11.45□□□□□ -0.58
CBX4-204ENST00000495122 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
CBX4-204ENST00000495122 ZNF22P17026 224 aaPredicted RBP11.45□□□□□ -0.58
CBX4-204ENST00000495122 TIRAPP58753 221 aa11.45□□□□□ -0.58
CBX4-204ENST00000495122 DEFB104AQ8WTQ1 72 aa11.45□□□□□ -0.58
CBX4-204ENST00000495122 OPRPNQ99935 248 aaPredicted RBP11.45□□□□□ -0.58
CBX4-204ENST00000495122 TM2D2Q9BX73 214 aa11.45□□□□□ -0.58
CBX4-204ENST00000495122 TCTAP57738 103 aa11.44□□□□□ -0.58
CBX4-204ENST00000495122 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
CBX4-204ENST00000495122 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
CBX4-204ENST00000495122 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 ZNF815PA8K554 130 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 DEFB135Q30KP9 77 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 ZFAND6Q6FIF0 208 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 NTM-AS1Q6ZSK4 140 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 Q6ZUT4 128 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 TMEM101Q96IK0 257 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 RETNQ9HD89 108 aa11.43□□□□□ -0.58
CBX4-204ENST00000495122 IGLV5-45A0A087WSX0 123 aa11.42□□□□□ -0.58
CBX4-204ENST00000495122 H3BRM9 83 aa11.42□□□□□ -0.58
CBX4-204ENST00000495122 J3QQQ9 107 aa11.42□□□□□ -0.58
CBX4-204ENST00000495122 UBE2L6O14933 153 aa11.42□□□□□ -0.58
CBX4-204ENST00000495122 DEFB130BP0DP73 79 aa11.42□□□□□ -0.58
CBX4-204ENST00000495122 DEFB130AP0DP74 79 aa11.42□□□□□ -0.58
CBX4-204ENST00000495122 LGALS3P17931 250 aaKnown RBP11.42□□□□□ -0.58
CBX4-204ENST00000495122 UBE2D1P51668 147 aa11.42□□□□□ -0.58
CBX4-204ENST00000495122 EMP1P54849 157 aa11.42□□□□□ -0.58
CBX4-204ENST00000495122 IGHV4-28A0A0C4DH34 117 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 LCE6AA0A183 80 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 HERVK_113P63121 156 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 FAM222AQ5U5X8 452 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 CEND1Q8N111 149 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 Q8NAQ8 132 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 OR5A1Q8NGJ0 315 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 TTTY13Q9BZ97 58 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 ALMS1Q8TCU4 4167 aa11.41□□□□□ -0.58
CBX4-204ENST00000495122 EPPK1P58107 5090 aaKnown RBP11.41□□□□□ -0.58
CBX4-204ENST00000495122 TAX1BP3O14907 124 aa11.4□□□□□ -0.58
CBX4-204ENST00000495122 AMMECR1LQ6DCA0 310 aa11.4□□□□□ -0.58
CBX4-204ENST00000495122 GEMIN7Q9H840 131 aaKnown RBP11.4□□□□□ -0.58
CBX4-204ENST00000495122 SPANXB1Q9NS25 103 aaPredicted RBP11.4□□□□□ -0.58
CBX4-204ENST00000495122 TRBV6-8A0A0A6YYG3 113 aa11.39□□□□□ -0.59
CBX4-204ENST00000495122 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
CBX4-204ENST00000495122 DAD1P61803 113 aa11.39□□□□□ -0.59
CBX4-204ENST00000495122 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
CBX4-204ENST00000495122 SCGB1D4Q6XE38 83 aa11.39□□□□□ -0.59
CBX4-204ENST00000495122 HIST1H4GQ99525 98 aa11.39□□□□□ -0.59
CBX4-204ENST00000495122 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
CBX4-204ENST00000495122 TMEM238LA0A1B0GVL6 79 aa11.38□□□□□ -0.59
CBX4-204ENST00000495122 A6NJY4 79 aa11.38□□□□□ -0.59
CBX4-204ENST00000495122 GCSHP23434 173 aa11.38□□□□□ -0.59
CBX4-204ENST00000495122 SH2D6Q7Z4S9 175 aa11.38□□□□□ -0.59
CBX4-204ENST00000495122 ATP6V0E2Q8NHE4 81 aa11.38□□□□□ -0.59
CBX4-204ENST00000495122 CDC42SE2Q9NRR3 84 aa11.38□□□□□ -0.59
CBX4-204ENST00000495122 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms