RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 RNF183Q96D59 192 aa9.74□□□□□ -0.85
SUPT20H-222ENST00000495071 ZFYVE26Q68DK2 2539 aa9.74□□□□□ -0.85
SUPT20H-222ENST00000495071 DNAJC30Q96LL9 226 aa9.74□□□□□ -0.85
SUPT20H-222ENST00000495071 ABCA12Q86UK0 2595 aa9.73□□□□□ -0.85
SUPT20H-222ENST00000495071 Q9H8V8 135 aa9.73□□□□□ -0.85
SUPT20H-222ENST00000495071 UTP20O75691 2785 aaKnown RBP9.73□□□□□ -0.85
SUPT20H-222ENST00000495071 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
SUPT20H-222ENST00000495071 STHQ8IWL8 128 aa9.73□□□□□ -0.85
SUPT20H-222ENST00000495071 A0A1W2PRX2 142 aa9.72□□□□□ -0.85
SUPT20H-222ENST00000495071 M0QXV9 152 aa9.72□□□□□ -0.85
SUPT20H-222ENST00000495071 TMEM101Q96IK0 257 aa9.72□□□□□ -0.85
SUPT20H-222ENST00000495071 SETD2Q9BYW2 2564 aaPredicted RBP9.72□□□□□ -0.85
SUPT20H-222ENST00000495071 TTC32Q5I0X7 151 aa9.72□□□□□ -0.85
SUPT20H-222ENST00000495071 H7C423 109 aa9.71□□□□□ -0.85
SUPT20H-222ENST00000495071 IFITM1P13164 125 aa9.71□□□□□ -0.85
SUPT20H-222ENST00000495071 C11orf72Q8NBR9 251 aa9.71□□□□□ -0.85
SUPT20H-222ENST00000495071 PIK3CD-AS1Q5SR53 167 aa9.71□□□□□ -0.86
SUPT20H-222ENST00000495071 TRAV4A0A0B4J268 109 aa9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 IGHV4-31P0DP07 118 aa9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 DEFB114Q30KQ6 69 aa9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 HERVK_113P63121 156 aa9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 COX6A2Q02221 97 aa9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 PRIMA1Q86XR5 153 aa9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 C15orf53Q8NAA6 179 aa9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 RS1O15537 224 aa9.7□□□□□ -0.86
SUPT20H-222ENST00000495071 NDUFA1O15239 70 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 NDUFA7O95182 113 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 C4orf3Q8WVX3 66 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 H3BT86 120 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 CRLF1O75462 422 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 TIRAPP58753 221 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 GAGE12JA6NER3 117 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 GAGE4Q13068 117 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 GAGE5Q13069 117 aa9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.69□□□□□ -0.86
SUPT20H-222ENST00000495071 A0A096LNT2 108 aa9.68□□□□□ -0.86
SUPT20H-222ENST00000495071 A8MTW9 85 aa9.68□□□□□ -0.86
SUPT20H-222ENST00000495071 TIMM17BO60830 172 aa9.68□□□□□ -0.86
SUPT20H-222ENST00000495071 IGSF10Q6WRI0 2623 aa9.68□□□□□ -0.86
SUPT20H-222ENST00000495071 LST1O00453 97 aa9.68□□□□□ -0.86
SUPT20H-222ENST00000495071 BEAN1Q3B7T3 259 aa9.68□□□□□ -0.86
SUPT20H-222ENST00000495071 ZNF462Q96JM2 2506 aa9.68□□□□□ -0.86
SUPT20H-222ENST00000495071 UBE2L6O14933 153 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 LINC00694P0DN24 101 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 LINC00308Q8TCZ7 52 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 LINC00242Q5T6M2 205 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 CCDC168Q8NDH2 2452 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 EPG5Q9HCE0 2579 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 SVIPQ8NHG7 77 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 CITED1Q99966 193 aa9.67□□□□□ -0.86
SUPT20H-222ENST00000495071 MXRA5Q9NR99 2828 aa9.66□□□□□ -0.86
SUPT20H-222ENST00000495071 PRB1P04280 392 aa9.66□□□□□ -0.86
SUPT20H-222ENST00000495071 Q6ZTI0 123 aa9.66□□□□□ -0.86
SUPT20H-222ENST00000495071 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
SUPT20H-222ENST00000495071 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
SUPT20H-222ENST00000495071 K7EQD1 137 aa9.65□□□□□ -0.86
SUPT20H-222ENST00000495071 JMJD1CQ15652 2540 aa9.65□□□□□ -0.87
SUPT20H-222ENST00000495071 TRGV2A0A075B6R0 118 aa9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 FSHBP01225 129 aa9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 NDUFV3P56181 108 aaKnown RBP9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 Q96MF0 132 aa9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 NOP10Q9NPE3 64 aaKnown RBP9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 TOMM7Q9P0U1 55 aa9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 IGLV5-45A0A087WSX0 123 aa9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 TEX15Q9BXT5 2789 aa9.64□□□□□ -0.87
SUPT20H-222ENST00000495071 KRTAP10-9P60411 292 aa9.63□□□□□ -0.87
SUPT20H-222ENST00000495071 CITED2Q99967 270 aaPredicted RBP9.63□□□□□ -0.87
SUPT20H-222ENST00000495071 SMIM1B2RUZ4 78 aa9.63□□□□□ -0.87
SUPT20H-222ENST00000495071 B5MCH6 92 aa9.63□□□□□ -0.87
SUPT20H-222ENST00000495071 DAZ2Q13117 558 aaKnown RBP9.63□□□□□ -0.87
SUPT20H-222ENST00000495071 DAZ4Q86SG3 579 aaKnown RBP9.63□□□□□ -0.87
SUPT20H-222ENST00000495071 DAZ3Q9NR90 486 aaKnown RBP9.63□□□□□ -0.87
SUPT20H-222ENST00000495071 CHD6Q8TD26 2715 aa9.62□□□□□ -0.87
SUPT20H-222ENST00000495071 GAGE6Q13070 117 aa9.62□□□□□ -0.87
SUPT20H-222ENST00000495071 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
SUPT20H-222ENST00000495071 TRBV10-1A0A0K0K1A3 114 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 GAGE7O76087 117 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 GAGE12FP0CL80 117 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 GAGE12GP0CL81 117 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 GAGE12IP0CL82 117 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 NTM-AS1Q6ZSK4 140 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 Q8N2B8 174 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 SS18L2Q9UHA2 77 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 COX7A2LO14548 114 aa9.61□□□□□ -0.87
SUPT20H-222ENST00000495071 CCL24O00175 119 aa9.6□□□□□ -0.87
SUPT20H-222ENST00000495071 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
SUPT20H-222ENST00000495071 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
SUPT20H-222ENST00000495071 SOSTDC1Q6X4U4 206 aa9.6□□□□□ -0.87
SUPT20H-222ENST00000495071 CDC42SE2Q9NRR3 84 aa9.6□□□□□ -0.87
SUPT20H-222ENST00000495071 LINC01600Q96MT4 127 aa9.59□□□□□ -0.87
SUPT20H-222ENST00000495071 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
SUPT20H-222ENST00000495071 TRAV25A0A0B4J276 109 aa9.58□□□□□ -0.88
SUPT20H-222ENST00000495071 HERV-K104P63124 156 aa9.58□□□□□ -0.88
SUPT20H-222ENST00000495071 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
SUPT20H-222ENST00000495071 LOC100131303A0A0U1RQF7 123 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms