RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 S100A8P05109 93 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 SFTA3P0C7M3 94 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 APELAP0DMC3 54 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 HLA-DRB4P13762 266 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 EVI2AP22794 236 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 GNG4P50150 75 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 ZNF137PP52743 207 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 QRFPP83859 136 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 RHOHQ15669 191 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 ADIRFQ15847 76 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 OCIAD2Q56VL3 154 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 RPL39P5Q59GN2 51 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 Q5BKY6 102 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 SPINK9Q5DT21 86 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 MINOS1Q5TGZ0 78 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 SPANXN1Q5VSR9 72 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 MIC13Q5XKP0 118 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 CYP2G1PQ6ZSU1 146 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.47□□□□□ -2.33
VPS50-219ENST00000495039 DYNLRB2Q8TF09 96 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 LEAP2Q969E1 77 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 USMG5Q96IX5 58 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 FAM103A1Q9BTL3 118 aaKnown RBP0.47□□□□□ -2.33
VPS50-219ENST00000495039 SEC11CQ9BY50 192 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 PRO3102Q9H379 93 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 DPH3P1Q9H4G8 78 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 GNG13Q9P2W3 67 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 RABAC1Q9UI14 185 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 LINC00312Q9Y6C7 94 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 U3KQA8 63 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 ARL2-SNX15V9GYD0 113 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 V9GYH0 126 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 HLA-DRB4X5D2U9 266 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 PPLO60437 1756 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 C4AP0C0L4 1744 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 RICTORQ6R327 1708 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 NRXN3Q9Y4C0 1643 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 NUP98P52948 1817 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 SPEF2Q9C093 1822 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TRBV7-1A0A0A6YYK4 115 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TRAV2A0A0B4J234 112 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TRAV21A0A0B4J279 112 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 A0A0G2JMM0 328 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 CTXND1A0A1B0GTU2 59 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 UBE2L5PA0A1B0GUS4 154 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 A0A1B0GW64 132 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 C20orf202A1L168 122 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 C7orf77A4D0Y5 90 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 F2Z2F3 143 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 H3BQ15 152 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 H3BUX3 64 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 K7ERU9 68 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 M0R1W7 72 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 NPFFO15130 113 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 PITX3O75364 302 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 LEPROTL1O95214 131 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 PPP1R17O96001 155 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 IGHV3-30P01768 117 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TFF1P04155 84 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 IGHV3-30-5P0DP03 117 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 CCL3L1P16619 93 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 ADCYAP1P18509 176 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 PDE6GP18545 87 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 FCER1GP30273 86 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TPPP2P59282 170 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 UBE2L3P68036 154 aaKnown RBP0.46□□□□□ -2.34
VPS50-219ENST00000495039 PRCDQ00LT1 54 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 HIST1H1AQ02539 215 aaPredicted RBP0.46□□□□□ -2.34
VPS50-219ENST00000495039 SPATA8Q6RVD6 105 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 LINC00575Q6W349 94 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 HEPN1Q6WQI6 88 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 Q6ZQY7 126 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 VMO1Q7Z5L0 202 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 ATOH7Q8N100 152 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 C9orf62Q8N4C0 152 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TTC9CQ8N5M4 171 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TMEM167AQ8TBQ9 72 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 PPDPFLQ8WWR9 84 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 GAFA1Q96PS6 74 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 AQP10Q96PS8 301 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TCEAL7Q9BRU2 100 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 PSMG3Q9BT73 122 aaPredicted RBP0.46□□□□□ -2.34
VPS50-219ENST00000495039 RHPN1-AS1Q9BWJ2 59 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 BPESC1Q9GZL8 116 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 MANBALQ9NQG1 85 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 NDUFA4L2Q9NRX3 87 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 RPRMQ9NS64 109 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 TMEM242Q9NWH2 141 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 BET1LQ9NYM9 111 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 MRPL36Q9P0J6 103 aaKnown RBP0.46□□□□□ -2.34
VPS50-219ENST00000495039 KAAG1Q9UBP8 84 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 CASZ1Q86V15 1759 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 ZFC3H1O60293 1989 aaKnown RBP0.46□□□□□ -2.34
VPS50-219ENST00000495039 PARP4Q9UKK3 1724 aaKnown RBP0.46□□□□□ -2.34
VPS50-219ENST00000495039 TOGARAM1Q9Y4F4 1720 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 CRYBG1Q9Y4K1 1723 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 SHPRHQ149N8 1683 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 FREM3P0C091 2139 aa0.46□□□□□ -2.34
VPS50-219ENST00000495039 PLXNA4Q9HCM2 1894 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms