RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 IGHV3OR16-12A0A075B7B8 117 aa11.07□□□□□ -0.64
SDF4-207ENST00000494748 COX7A2LO14548 114 aa11.07□□□□□ -0.64
SDF4-207ENST00000494748 PIK3CD-AS1Q5SR53 167 aa11.06□□□□□ -0.64
SDF4-207ENST00000494748 DUX5Q96PT3 197 aa11.06□□□□□ -0.64
SDF4-207ENST00000494748 C11orf72Q8NBR9 251 aa11.06□□□□□ -0.64
SDF4-207ENST00000494748 PIMREGQ9BSJ6 248 aa11.06□□□□□ -0.64
SDF4-207ENST00000494748 ITPR1Q14643 2758 aa11.06□□□□□ -0.64
SDF4-207ENST00000494748 IGHV3-53P01767 116 aa11.05□□□□□ -0.64
SDF4-207ENST00000494748 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
SDF4-207ENST00000494748 IMUPQ9GZP8 106 aa11.05□□□□□ -0.64
SDF4-207ENST00000494748 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 FAM19A3Q7Z5A8 133 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 Q9H8V8 135 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 CUBNO60494 3623 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 IGHV4-59P01825 116 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 ACYP1P07311 99 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 C3orf56Q8N813 242 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 PRORYQ9H606 182 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 FAM236AA0A1B0GUQ0 79 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 FAM236BA0A1B0GV22 79 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 FAM218AQ96MZ4 157 aa11.04□□□□□ -0.64
SDF4-207ENST00000494748 AKAP9Q99996 3911 aa11.03□□□□□ -0.64
SDF4-207ENST00000494748 MSMBP08118 114 aa11.03□□□□□ -0.64
SDF4-207ENST00000494748 ZNF625Q96I27 306 aaPredicted RBP11.03□□□□□ -0.64
SDF4-207ENST00000494748 SMIM1B2RUZ4 78 aa11.02□□□□□ -0.64
SDF4-207ENST00000494748 HOXD3P31249 432 aaPredicted RBP11.02□□□□□ -0.64
SDF4-207ENST00000494748 DNAJC30Q96LL9 226 aa11.02□□□□□ -0.64
SDF4-207ENST00000494748 A0A0U1RRA0 63 aa11.02□□□□□ -0.65
SDF4-207ENST00000494748 NDUFA7O95182 113 aa11.02□□□□□ -0.65
SDF4-207ENST00000494748 DAZ2Q13117 558 aaKnown RBP11.02□□□□□ -0.65
SDF4-207ENST00000494748 DAZ4Q86SG3 579 aaKnown RBP11.02□□□□□ -0.65
SDF4-207ENST00000494748 DAZ3Q9NR90 486 aaKnown RBP11.02□□□□□ -0.65
SDF4-207ENST00000494748 LINC00694P0DN24 101 aa11.01□□□□□ -0.65
SDF4-207ENST00000494748 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
SDF4-207ENST00000494748 NOTCH2Q04721 2471 aa11.01□□□□□ -0.65
SDF4-207ENST00000494748 JMJD1CQ15652 2540 aa11.01□□□□□ -0.65
SDF4-207ENST00000494748 DEFB131AP59861 70 aa11.01□□□□□ -0.65
SDF4-207ENST00000494748 ZNF415Q09FC8 603 aa11.01□□□□□ -0.65
SDF4-207ENST00000494748 F5H768 121 aa11□□□□□ -0.65
SDF4-207ENST00000494748 RS1O15537 224 aa11□□□□□ -0.65
SDF4-207ENST00000494748 TRACP01848 142 aa11□□□□□ -0.65
SDF4-207ENST00000494748 CIRBPQ14011 172 aaKnown RBP11□□□□□ -0.65
SDF4-207ENST00000494748 DEFB112Q30KQ8 113 aa11□□□□□ -0.65
SDF4-207ENST00000494748 LINC00643Q86TS7 51 aa11□□□□□ -0.65
SDF4-207ENST00000494748 MXRA5Q9NR99 2828 aa10.99□□□□□ -0.65
SDF4-207ENST00000494748 MYO18BQ8IUG5 2567 aa10.99□□□□□ -0.65
SDF4-207ENST00000494748 UCNP55089 124 aa10.99□□□□□ -0.65
SDF4-207ENST00000494748 TMEM126AQ9H061 195 aa10.99□□□□□ -0.65
SDF4-207ENST00000494748 HERVK_113P63121 156 aa10.98□□□□□ -0.65
SDF4-207ENST00000494748 C5orf38Q86SI9 138 aa10.98□□□□□ -0.65
SDF4-207ENST00000494748 ZANQ9Y493 2812 aa10.98□□□□□ -0.65
SDF4-207ENST00000494748 LY6DQ14210 128 aa10.98□□□□□ -0.65
SDF4-207ENST00000494748 C18orf65Q6ZTR6 163 aa10.97□□□□□ -0.65
SDF4-207ENST00000494748 PPDPFQ9H3Y8 114 aa10.97□□□□□ -0.65
SDF4-207ENST00000494748 BAALC-AS2P0C853 105 aa10.97□□□□□ -0.65
SDF4-207ENST00000494748 NTM-AS1Q6ZSK4 140 aa10.97□□□□□ -0.65
SDF4-207ENST00000494748 PEMTQ9UBM1 199 aa10.97□□□□□ -0.65
SDF4-207ENST00000494748 PIEZO1Q92508 2521 aa10.97□□□□□ -0.65
SDF4-207ENST00000494748 FAM222AQ5U5X8 452 aa10.96□□□□□ -0.65
SDF4-207ENST00000494748 CCL19Q99731 98 aa10.96□□□□□ -0.65
SDF4-207ENST00000494748 Q96MF0 132 aa10.96□□□□□ -0.65
SDF4-207ENST00000494748 SLURP1P55000 103 aa10.96□□□□□ -0.66
SDF4-207ENST00000494748 NBPF19A0A087WUL8 3843 aa10.95□□□□□ -0.66
SDF4-207ENST00000494748 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
SDF4-207ENST00000494748 UBE2E2Q96LR5 201 aa10.95□□□□□ -0.66
SDF4-207ENST00000494748 IL17DQ8TAD2 202 aa10.95□□□□□ -0.66
SDF4-207ENST00000494748 VPREB3Q9UKI3 123 aa10.95□□□□□ -0.66
SDF4-207ENST00000494748 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
SDF4-207ENST00000494748 CSDC2Q9Y534 153 aaKnown RBP10.95□□□□□ -0.66
SDF4-207ENST00000494748 ZNF702PQ9H963 129 aa10.94□□□□□ -0.66
SDF4-207ENST00000494748 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
SDF4-207ENST00000494748 C2orf48Q96LS8 159 aa10.93□□□□□ -0.66
SDF4-207ENST00000494748 MAP6D1Q9H9H5 199 aa10.93□□□□□ -0.66
SDF4-207ENST00000494748 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
SDF4-207ENST00000494748 CXCL5P42830 114 aa10.93□□□□□ -0.66
SDF4-207ENST00000494748 C9orf129Q5T035 196 aaKnown RBP10.93□□□□□ -0.66
SDF4-207ENST00000494748 PRIMA1Q86XR5 153 aa10.93□□□□□ -0.66
SDF4-207ENST00000494748 NAV2Q8IVL1 2488 aa10.93□□□□□ -0.66
SDF4-207ENST00000494748 IGKV2-28A0A075B6P5 120 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 IGKV2D-28P01615 120 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 ATP5J2P56134 94 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 RPL28P46779 137 aaKnown RBP10.92□□□□□ -0.66
SDF4-207ENST00000494748 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 CDC42SE2Q9NRR3 84 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 PKD1L2Q7Z442 2459 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 UTP20O75691 2785 aaKnown RBP10.92□□□□□ -0.66
SDF4-207ENST00000494748 B4DSR2 109 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 Q9HAA7 133 aa10.92□□□□□ -0.66
SDF4-207ENST00000494748 TRAV13-1A0A0B4J241 112 aa10.91□□□□□ -0.66
SDF4-207ENST00000494748 LINC00337Q8N6G1 96 aa10.91□□□□□ -0.66
SDF4-207ENST00000494748 UQCRQO14949 82 aa10.91□□□□□ -0.66
SDF4-207ENST00000494748 GNLYP22749 145 aa10.91□□□□□ -0.66
SDF4-207ENST00000494748 COPS9Q8WXC6 57 aa10.91□□□□□ -0.66
SDF4-207ENST00000494748 HIST2H2BCQ6DN03 193 aa10.91□□□□□ -0.66
SDF4-207ENST00000494748 HIST2H2BDQ6DRA6 164 aa10.91□□□□□ -0.66
SDF4-207ENST00000494748 ATP5G1P05496 136 aa10.89□□□□□ -0.67
SDF4-207ENST00000494748 MALP21145 153 aa10.89□□□□□ -0.67
SDF4-207ENST00000494748 C9orf153Q5TBE3 101 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms