RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 MAP1LC3AQ9H492 121 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 PGPEP1Q9NXJ5 209 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 TRAV8-4A0A0B4J246 113 aa8.94□□□□□ -0.98
COL1A1-208ENST00000494334 IGKV3OR2-268A0A0C4DH90 116 aa8.94□□□□□ -0.98
COL1A1-208ENST00000494334 OR5A1Q8NGJ0 315 aa8.94□□□□□ -0.98
COL1A1-208ENST00000494334 TMEM18Q96B42 140 aa8.94□□□□□ -0.98
COL1A1-208ENST00000494334 CDC42SE2Q9NRR3 84 aa8.94□□□□□ -0.98
COL1A1-208ENST00000494334 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
COL1A1-208ENST00000494334 MT-ND6P03923 174 aa8.93□□□□□ -0.98
COL1A1-208ENST00000494334 RAB5AP20339 215 aa8.93□□□□□ -0.98
COL1A1-208ENST00000494334 Q8N8P6 123 aa8.93□□□□□ -0.98
COL1A1-208ENST00000494334 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
COL1A1-208ENST00000494334 RPL39P62891 51 aaKnown RBP8.92□□□□□ -0.98
COL1A1-208ENST00000494334 FABP9Q0Z7S8 132 aa8.92□□□□□ -0.98
COL1A1-208ENST00000494334 DGAT2L7PQ6IED9 249 aa8.92□□□□□ -0.98
COL1A1-208ENST00000494334 CDPF1Q6NVV7 123 aa8.92□□□□□ -0.98
COL1A1-208ENST00000494334 ZNF664Q8N3J9 261 aa8.92□□□□□ -0.98
COL1A1-208ENST00000494334 MRPL18Q9H0U6 180 aaKnown RBP8.92□□□□□ -0.98
COL1A1-208ENST00000494334 SMAGPQ0VAQ4 97 aa8.91□□□□□ -0.98
COL1A1-208ENST00000494334 YPEL4Q96NS1 127 aa8.91□□□□□ -0.98
COL1A1-208ENST00000494334 ALKBH7Q9BT30 221 aaPredicted RBP8.91□□□□□ -0.98
COL1A1-208ENST00000494334 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
COL1A1-208ENST00000494334 KIAA1109Q2LD37 5005 aa8.91□□□□□ -0.98
COL1A1-208ENST00000494334 IFI27P40305 119 aaPredicted RBP8.9□□□□□ -0.98
COL1A1-208ENST00000494334 NTN5Q8WTR8 489 aaPredicted RBP8.9□□□□□ -0.98
COL1A1-208ENST00000494334 NXT2Q9NPJ8 142 aaKnown RBP8.9□□□□□ -0.98
COL1A1-208ENST00000494334 TRAPPC1Q9Y5R8 145 aa8.9□□□□□ -0.98
COL1A1-208ENST00000494334 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
COL1A1-208ENST00000494334 LINC00959A0A1B0GUT2 108 aa8.89□□□□□ -0.99
COL1A1-208ENST00000494334 CBLN2Q8IUK8 224 aa8.89□□□□□ -0.99
COL1A1-208ENST00000494334 CHCHD10Q8WYQ3 142 aaPredicted RBP8.89□□□□□ -0.99
COL1A1-208ENST00000494334 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
COL1A1-208ENST00000494334 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
COL1A1-208ENST00000494334 GAGE12HA6NDE8 117 aa8.88□□□□□ -0.99
COL1A1-208ENST00000494334 USP17L23D6RBM5 183 aa8.88□□□□□ -0.99
COL1A1-208ENST00000494334 K7EMI3 77 aa8.88□□□□□ -0.99
COL1A1-208ENST00000494334 ORMDL2Q53FV1 153 aa8.88□□□□□ -0.99
COL1A1-208ENST00000494334 RNASE13Q5GAN3 156 aaKnown RBP8.88□□□□□ -0.99
COL1A1-208ENST00000494334 Q6ZUT4 128 aa8.88□□□□□ -0.99
COL1A1-208ENST00000494334 SMCO4Q9NRQ5 59 aa8.88□□□□□ -0.99
COL1A1-208ENST00000494334 SPANXA1Q9NS26 97 aa8.88□□□□□ -0.99
COL1A1-208ENST00000494334 PRSS3P2Q8NHM4 247 aa8.87□□□□□ -0.99
COL1A1-208ENST00000494334 OPRPNQ99935 248 aaPredicted RBP8.87□□□□□ -0.99
COL1A1-208ENST00000494334 CCL25O15444 150 aa8.86□□□□□ -0.99
COL1A1-208ENST00000494334 GCSHP23434 173 aa8.86□□□□□ -0.99
COL1A1-208ENST00000494334 KRTAP10-1P60331 282 aa8.86□□□□□ -0.99
COL1A1-208ENST00000494334 MRPS36P82909 103 aaKnown RBP8.86□□□□□ -0.99
COL1A1-208ENST00000494334 FOXI1Q12951 378 aa8.86□□□□□ -0.99
COL1A1-208ENST00000494334 SS18Q15532 418 aa8.86□□□□□ -0.99
COL1A1-208ENST00000494334 C14orf177Q52M58 125 aa8.86□□□□□ -0.99
COL1A1-208ENST00000494334 C2orf66Q6UXQ4 117 aa8.86□□□□□ -0.99
COL1A1-208ENST00000494334 PYGO1Q9Y3Y4 419 aa8.86□□□□□ -0.99
COL1A1-208ENST00000494334 APOBP04114 4563 aaKnown RBP8.86□□□□□ -0.99
COL1A1-208ENST00000494334 RYR1P21817 5038 aa8.85□□□□□ -0.99
COL1A1-208ENST00000494334 PRSS1P07477 247 aa8.85□□□□□ -0.99
COL1A1-208ENST00000494334 XCL1P47992 114 aa8.85□□□□□ -0.99
COL1A1-208ENST00000494334 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
COL1A1-208ENST00000494334 TRAV13-1A0A0B4J241 112 aa8.84□□□□□ -0.99
COL1A1-208ENST00000494334 LINC01546A6NGU7 62 aa8.84□□□□□ -0.99
COL1A1-208ENST00000494334 C1orf196B1AJZ1 125 aa8.84□□□□□ -0.99
COL1A1-208ENST00000494334 CD164L2Q6UWJ8 174 aa8.84□□□□□ -0.99
COL1A1-208ENST00000494334 DNAH8Q96JB1 4490 aa8.84□□□□□ -1
COL1A1-208ENST00000494334 IGLV4-3A0A075B6K6 122 aa8.83□□□□□ -1
COL1A1-208ENST00000494334 HERC2O95714 4834 aa8.82□□□□□ -1
COL1A1-208ENST00000494334 IGIPA6NJ69 53 aa8.82□□□□□ -1
COL1A1-208ENST00000494334 G0S2P27469 103 aa8.82□□□□□ -1
COL1A1-208ENST00000494334 CFAP161Q6P656 301 aa8.82□□□□□ -1
COL1A1-208ENST00000494334 C15orf56Q8N910 161 aa8.82□□□□□ -1
COL1A1-208ENST00000494334 C18orf32Q8TCD1 76 aa8.82□□□□□ -1
COL1A1-208ENST00000494334 TOMM6Q96B49 74 aa8.82□□□□□ -1
COL1A1-208ENST00000494334 hDV102S1A0JD36 115 aa8.81□□□□□ -1
COL1A1-208ENST00000494334 CDK2AP2O75956 126 aa8.81□□□□□ -1
COL1A1-208ENST00000494334 LINC01620Q4KN68 170 aa8.81□□□□□ -1
COL1A1-208ENST00000494334 FA2HQ7L5A8 372 aa8.81□□□□□ -1
COL1A1-208ENST00000494334 URB1-AS1Q96HZ7 61 aa8.81□□□□□ -1
COL1A1-208ENST00000494334 TMEM141Q96I45 108 aa8.81□□□□□ -1
COL1A1-208ENST00000494334 IFITM10A6NMD0 228 aa8.8□□□□□ -1
COL1A1-208ENST00000494334 NPSP0C0P6 89 aa8.8□□□□□ -1
COL1A1-208ENST00000494334 HSPG2P98160 4391 aa8.8□□□□□ -1
COL1A1-208ENST00000494334 COLCA2A8K830 154 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 SLPIP03973 132 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 LINC00614P0C842 121 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 HIGD2BQ4VC39 106 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 ZC2HC1BQ5TFG8 222 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 TEX43Q6ZNM6 134 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 AMELXQ99217 191 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 TIMM17AQ99595 171 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 AP5S1Q9NUS5 200 aa8.79□□□□□ -1
COL1A1-208ENST00000494334 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
COL1A1-208ENST00000494334 IGHV1-58A0A0C4DH39 117 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 TRGC2P03986 189 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 CNBPP62633 177 aaKnown RBP8.78□□□□□ -1
COL1A1-208ENST00000494334 Q6ZN92 141 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 LINC00173Q6ZV60 143 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 ERASQ7Z444 233 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 C5orf38Q86SI9 138 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 SCGB3A1Q96QR1 104 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 VCX2Q9H322 139 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
COL1A1-208ENST00000494334 IGHV3OR16-9A0A0B4J2B5 98 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms