RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 NTM-AS1Q6ZSK4 140 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 CHCHD7Q9BUK0 85 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 ACTR3CQ9C0K3 210 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-219ENST00000494323 TMEM167BQ9NRX6 74 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 PKHD1L1Q86WI1 4243 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 TRBV10-1A0A0K0K1A3 114 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 KANTRA0A1W2PQU2 76 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 A0A1W2PRE2 83 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 PCP4L1A6NKN8 68 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 RPL13AP40429 203 aaKnown RBP3.23□□□□□ -1.89
PTCD3-219ENST00000494323 RAB4BP61018 213 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 RBX1P62877 108 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 ZNF56Q15929 161 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 MIAQ16674 131 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 FAM162BQ5T6X4 162 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 KRTAP26-1Q6PEX3 210 aa3.23□□□□□ -1.89
PTCD3-219ENST00000494323 INO80EQ8NBZ0 244 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-219ENST00000494323 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 FXYD6-FXYD2A0A087WZ82 144 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 PEX7O00628 323 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 PHOX2AO14813 284 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 MBP02144 154 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 RAB14P61106 215 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 RPL19P84098 196 aaKnown RBP3.22□□□□□ -1.89
PTCD3-219ENST00000494323 SERF2P84101 59 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 REG3AQ06141 175 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 ZNF726P1Q15940 193 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 Q5BKY6 102 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 C6orf226Q5I0X4 101 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 EIF5AL1Q6IS14 154 aaKnown RBP3.22□□□□□ -1.89
PTCD3-219ENST00000494323 Q86TA4 180 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 SLC51BQ86UW2 128 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 ZFP82Q8N141 532 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 C9orf62Q8N4C0 152 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 OR10AG1Q8NH19 301 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 LYPD6BQ8NI32 183 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 PSMG3Q9BT73 122 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-219ENST00000494323 DERL1Q9BUN8 251 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 PRR34Q9NV39 138 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 TNFSF18Q9UNG2 199 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 ZFP30Q9Y2G7 519 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 LRP2P98164 4655 aa3.22□□□□□ -1.89
PTCD3-219ENST00000494323 IGHV3-64A0A075B6Q5 118 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 TRBV6-1A0A0K0K1D8 114 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 ARPC5O15511 151 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 ATP5LO75964 103 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 NKX2-5P52952 324 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-219ENST00000494323 UBE2G1P62253 170 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 COX6A2Q02221 97 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 CIRBPQ14011 172 aaKnown RBP3.21□□□□□ -1.9
PTCD3-219ENST00000494323 RPL7L1Q6DKI1 246 aaKnown RBP3.21□□□□□ -1.9
PTCD3-219ENST00000494323 KCNRGQ8N5I3 272 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-219ENST00000494323 HIST1H2BAQ96A08 127 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 LINC01600Q96MT4 127 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 AQP10Q96PS8 301 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 KIR2DL4Q99706 377 aa3.21□□□□□ -1.9
PTCD3-219ENST00000494323 ZNF471Q9BX82 626 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-219ENST00000494323 IGLV4-60A0A075B6I1 120 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 TRBV25-1A0A075B6N4 114 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-219ENST00000494323 IGKV2-24A0A0C4DH68 120 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 IGKV3OR2-268A0A0C4DH90 116 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 CTXND1A0A1B0GTU2 59 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 G3V3Q6 166 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 LTAP01374 205 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 S100A1P23297 94 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 CNBPP62633 177 aaKnown RBP3.2□□□□□ -1.9
PTCD3-219ENST00000494323 SPANXN1Q5VSR9 72 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 TEX261Q6UWH6 196 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 C20orf203Q8NBC4 194 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 STOML3Q8TAV4 291 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 C7orf33Q8WU49 177 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 FMC1Q96HJ9 113 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 NKX6-2Q9C056 277 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-219ENST00000494323 VAX2Q9UIW0 290 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 KIF25-AS1Q9Y6Z4 181 aa3.2□□□□□ -1.9
PTCD3-219ENST00000494323 BORCS7-ASMTA0A0B4J1R7 106 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 TRAV8-4A0A0B4J246 113 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 IGHV1-24A0A0C4DH33 117 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 SMLR1H3BR10 107 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 P01737 135 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 SMIM17P0DL12 118 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 KRTAP10-8P60410 259 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 PKIAP61925 76 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 IQCJQ1A5X6 159 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 TMEM97Q5BJF2 176 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 MTURNQ8N3F0 131 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 SPACA4Q8TDM5 124 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 RNF185Q96GF1 192 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
PTCD3-219ENST00000494323 TNXBP22105 4242 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 A0A0J9YXV3 536 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 A0A1B0GV50 99 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 MAP1LC3B2A6NCE7 125 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 M0QY20 66 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 SNAI2O43623 268 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 MGPP08493 103 aa3.18□□□□□ -1.9
PTCD3-219ENST00000494323 OR5AL1P0C617 328 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms