RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TRAV13-2A0A0B4J235 113 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 F6UB75 175 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 MIFP14174 115 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 PIEZO2Q9H5I5 2752 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 ATP5EP2Q5VTU8 51 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 Q6ZRU5 148 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 ZNF469Q96JG9 3925 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-205ENST00000493587 IGHV1-58A0A0C4DH39 117 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 LECT2O14960 151 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 SLPIP03973 132 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 HIST2H2BCQ6DN03 193 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 HIST2H2BDQ6DRA6 164 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 DGAT2L7PQ6IED9 249 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 ZNF833PQ6ZTB9 187 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 LITAFQ99732 161 aa5.03□□□□□ -1.6
VPS13B-205ENST00000493587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.02□□□□□ -1.612e-7■■■■■ 28
VPS13B-205ENST00000493587 LRBAP50851 2863 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 IGHV1-18A0A0C4DH31 117 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 NDUFB3O43676 98 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 PRB2P02812 416 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-205ENST00000493587 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS13B-205ENST00000493587 KLKP1Q107X0 134 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 IGLV3-9A0A075B6K5 115 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 I3L2K1 104 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 GRNP28799 593 aaKnown RBP5.02□□□□□ -1.61
VPS13B-205ENST00000493587 C9orf129Q5T035 196 aaKnown RBP5.02□□□□□ -1.61
VPS13B-205ENST00000493587 C6orf223Q8N319 242 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-205ENST00000493587 CNEP1R1Q8N9A8 125 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 LINC00308Q8TCZ7 52 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 OVOL2Q9BRP0 275 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 C15orf32Q32M92 178 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 DYNLRB2Q8TF09 96 aa5.02□□□□□ -1.61
VPS13B-205ENST00000493587 SPTBN2O15020 2390 aa5.01□□□□□ -1.61
VPS13B-205ENST00000493587 COX8CQ7Z4L0 72 aa5.01□□□□□ -1.61
VPS13B-205ENST00000493587 Q9H8V8 135 aa5.01□□□□□ -1.61
VPS13B-205ENST00000493587 IGLV2-23P01705 113 aa5.01□□□□□ -1.61
VPS13B-205ENST00000493587 TEX22C9J3V5 150 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 PF4P02776 101 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 RNASE4P34096 147 aaKnown RBP5□□□□□ -1.61
VPS13B-205ENST00000493587 SUMO4Q6EEV6 95 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 ZNF575Q86XF7 245 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 K7EIM0 57 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 GNRH2O43555 120 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 IGHV1-69P01742 117 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
VPS13B-205ENST00000493587 MRGPRG-AS1Q2M3A8 158 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 MIR7-3HGQ8N6C7 128 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
VPS13B-205ENST00000493587 UBE2E2Q96LR5 201 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 TRAV10A0A0B4J240 114 aa5□□□□□ -1.61
VPS13B-205ENST00000493587 C1orf158Q8N1D5 194 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 SPTBN4Q9H254 2564 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 IGLV4-3A0A075B6K6 122 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 IGHV4-4A0A075B6R2 117 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 A0A087WYN8 130 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 TMEM256-PLSCR3K7ERE1 68 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 GPHB5Q86YW7 130 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 CSMD2Q7Z408 3487 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 IGKV3-7A0A075B6H7 116 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 ORMDL1Q9P0S3 153 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 MED13LQ71F56 2210 aa4.99□□□□□ -1.61
VPS13B-205ENST00000493587 IGF2RP11717 2491 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 POLR2KP53803 58 aaKnown RBP4.98□□□□□ -1.61
VPS13B-205ENST00000493587 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 BEAN1Q3B7T3 259 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 TMEM30BQ3MIR4 351 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 VMO1Q7Z5L0 202 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 ASH1LQ9NR48 2969 aaKnown RBP4.98□□□□□ -1.61
VPS13B-205ENST00000493587 TLN1Q9Y490 2541 aaKnown RBP4.98□□□□□ -1.61
VPS13B-205ENST00000493587 IGF1P05019 195 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 COX7A1P24310 79 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 C22orf24Q9Y442 160 aa4.98□□□□□ -1.61
VPS13B-205ENST00000493587 COL6A6A6NMZ7 2263 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 PTPRZ1P23471 2315 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-205ENST00000493587 CACNA1AO00555 2505 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 RNF223E7ERA6 249 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 C9orf47Q6ZRZ4 202 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 C20orf203Q8NBC4 194 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 SMAD5-AS1Q9Y6J3 95 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 CUBNO60494 3623 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 UBE2L6O14933 153 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 SCXQ7RTU7 201 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 GAFA1Q96PS6 74 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 TM2D3Q9BRN9 247 aa4.97□□□□□ -1.61
VPS13B-205ENST00000493587 ECSCRQ19T08 205 aa4.96□□□□□ -1.61
VPS13B-205ENST00000493587 CFAP46Q8IYW2 2715 aa4.96□□□□□ -1.61
VPS13B-205ENST00000493587 ACACAQ13085 2346 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 M0R1B8 84 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 UBE2BP63146 152 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 KHDC1LQ5JSQ8 128 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 PRR9Q5T870 116 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 UNQ9165/PRO28630Q6UXU0 137 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 Q8N6K4 173 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 C2CD3Q4AC94 2353 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 H0YGX0 51 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 Q8N3U1 123 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 ZFAND3Q9H8U3 227 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms