RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 IGLV4-3A0A075B6K6 122 aa7.15□□□□□ -1.26
PRPF3-206ENST00000493553 TRBV25-1A0A075B6N4 114 aa7.15□□□□□ -1.26
PRPF3-206ENST00000493553 TRGV4A0A0C4DH28 118 aa7.15□□□□□ -1.26
PRPF3-206ENST00000493553 UBE2D3P61077 147 aa7.15□□□□□ -1.26
PRPF3-206ENST00000493553 UBE2D2P62837 147 aa7.15□□□□□ -1.26
PRPF3-206ENST00000493553 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
PRPF3-206ENST00000493553 ZNRF2Q8NHG8 242 aa7.15□□□□□ -1.26
PRPF3-206ENST00000493553 AMELXQ99217 191 aa7.15□□□□□ -1.26
PRPF3-206ENST00000493553 IGLV4-69A0A075B6H9 119 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 TRAV8-6A0A0B4J262 113 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 H3BRM9 83 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 GAGE7O76087 117 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 GAGE12FP0CL80 117 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 GAGE12GP0CL81 117 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 GAGE12IP0CL82 117 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 ATRQ13535 2644 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 TMEM170BQ5T4T1 132 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 LINC00612Q8N6U2 182 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 ZNF479Q96JC4 524 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 CHCHD7Q9BUK0 85 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 CHAC1Q9BUX1 264 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 TM2D2Q9BX73 214 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 COX11Q9Y6N1 276 aa7.14□□□□□ -1.27
PRPF3-206ENST00000493553 ANK3Q12955 4377 aaKnown RBP7.13□□□□□ -1.27
PRPF3-206ENST00000493553 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 TINCRA0A1B0GVN0 87 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 PLAC8L1A1L4L8 177 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 LEPROTO15243 131 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 PRM2P04554 102 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 MIFP14174 115 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 ZNF25P17030 456 aaPredicted RBP7.13□□□□□ -1.27
PRPF3-206ENST00000493553 LGALS3P17931 250 aaKnown RBP7.13□□□□□ -1.27
PRPF3-206ENST00000493553 PRIMA1Q86XR5 153 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 SLC25A29Q8N8R3 303 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 TMEM243Q9BU79 118 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 WFDC10AQ9H1F0 79 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 UBE2D4Q9Y2X8 147 aa7.13□□□□□ -1.27
PRPF3-206ENST00000493553 ZNF815PA8K554 130 aa7.12□□□□□ -1.27
PRPF3-206ENST00000493553 UBE2L6O14933 153 aa7.12□□□□□ -1.27
PRPF3-206ENST00000493553 TIRAPP58753 221 aa7.12□□□□□ -1.27
PRPF3-206ENST00000493553 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
PRPF3-206ENST00000493553 C3orf56Q8N813 242 aa7.12□□□□□ -1.27
PRPF3-206ENST00000493553 OR5A1Q8NGJ0 315 aa7.12□□□□□ -1.27
PRPF3-206ENST00000493553 GEMIN7Q9H840 131 aaKnown RBP7.12□□□□□ -1.27
PRPF3-206ENST00000493553 TEP1Q99973 2627 aaKnown RBP7.11□□□□□ -1.27
PRPF3-206ENST00000493553 ZNF469Q96JG9 3925 aaPredicted RBP7.11□□□□□ -1.27
PRPF3-206ENST00000493553 J3QQQ9 107 aa7.11□□□□□ -1.27
PRPF3-206ENST00000493553 SMIM13P0DJ93 91 aa7.11□□□□□ -1.27
PRPF3-206ENST00000493553 HERVK_113P63121 156 aa7.11□□□□□ -1.27
PRPF3-206ENST00000493553 FOXI1Q12951 378 aa7.11□□□□□ -1.27
PRPF3-206ENST00000493553 AMMECR1LQ6DCA0 310 aa7.11□□□□□ -1.27
PRPF3-206ENST00000493553 SH2D6Q7Z4S9 175 aa7.11□□□□□ -1.27
PRPF3-206ENST00000493553 HIST1H4GQ99525 98 aa7.11□□□□□ -1.27
PRPF3-206ENST00000493553 AKAP9Q99996 3911 aa7.1□□□□□ -1.27
PRPF3-206ENST00000493553 TMEM223A0PJW6 202 aa7.1□□□□□ -1.27
PRPF3-206ENST00000493553 FAM19A3Q7Z5A8 133 aa7.1□□□□□ -1.27
PRPF3-206ENST00000493553 CEND1Q8N111 149 aa7.1□□□□□ -1.27
PRPF3-206ENST00000493553 SPANXB1Q9NS25 103 aaPredicted RBP7.1□□□□□ -1.27
PRPF3-206ENST00000493553 PRO0255Q9UI72 69 aa7.1□□□□□ -1.27
PRPF3-206ENST00000493553 GAGE12JA6NER3 117 aa7.09□□□□□ -1.27
PRPF3-206ENST00000493553 A8MZ25 164 aa7.09□□□□□ -1.27
PRPF3-206ENST00000493553 ZNF22P17026 224 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-206ENST00000493553 GAGE4Q13068 117 aa7.09□□□□□ -1.27
PRPF3-206ENST00000493553 GAGE5Q13069 117 aa7.09□□□□□ -1.27
PRPF3-206ENST00000493553 Q6ZVH6 145 aa7.09□□□□□ -1.27
PRPF3-206ENST00000493553 PHLDA1Q8WV24 401 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-206ENST00000493553 TP73-AS1Q9UF72 201 aa7.09□□□□□ -1.27
PRPF3-206ENST00000493553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
PRPF3-206ENST00000493553 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 A0A0J9YXV3 536 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
PRPF3-206ENST00000493553 TMEM238C9JI98 176 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 TAX1BP3O14907 124 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 CCL25O15444 150 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 SPART-AS1P0CW21 52 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 EMP1P54849 157 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 TCTAP57738 103 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 SRSF9Q13242 221 aaKnown RBP eCLIP7.08□□□□□ -1.28
PRPF3-206ENST00000493553 VAMP3Q15836 100 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 GTF2H5Q6ZYL4 71 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 COPS9Q8WXC6 57 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 RNF183Q96D59 192 aa7.08□□□□□ -1.28
PRPF3-206ENST00000493553 NACAE9PAV3 2078 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 TRAV26-1A0A087WT03 109 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 TRBV6-8A0A0A6YYG3 113 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 IGHV3-38A0A0C4DH36 116 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 IGHV1-58A0A0C4DH39 117 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 LINC00694P0DN24 101 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 DEFB130BP0DP73 79 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 DEFB130AP0DP74 79 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 UBE2D1P51668 147 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 UBE2V1Q13404 147 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 SBSPONQ8IVN8 264 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 LINC00469Q8N7U9 141 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
PRPF3-206ENST00000493553 ATP5G1P05496 136 aa7.06□□□□□ -1.28
PRPF3-206ENST00000493553 DAD1P61803 113 aa7.06□□□□□ -1.28
PRPF3-206ENST00000493553 EGFEM1PQ0D2K5 195 aa7.06□□□□□ -1.28
PRPF3-206ENST00000493553 KRTAP5-3Q6L8H2 238 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms