RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 HSBP1O75506 76 aa10.61□□□□□ -0.71
HPS4-216ENST00000493455 REG3AQ06141 175 aa10.61□□□□□ -0.71
HPS4-216ENST00000493455 CHCHD1Q96BP2 118 aaKnown RBP10.61□□□□□ -0.71
HPS4-216ENST00000493455 SPANXA1Q9NS26 97 aa10.61□□□□□ -0.71
HPS4-216ENST00000493455 SACSQ9NZJ4 4579 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 IGLV10-54A0A075B6I4 117 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 IGKV2D-24A0A075B6R9 120 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 HBDP02042 147 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 G0S2P27469 103 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 NDUFA6P56556 154 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 C1orf134Q5TEV5 83 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 ENHOQ6UWT2 76 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 C6orf223Q8N319 242 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 FAM19A2Q8N3H0 131 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 ZNF664Q8N3J9 261 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 TOMM6Q96B49 74 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 SCGB3A1Q96QR1 104 aa10.6□□□□□ -0.71
HPS4-216ENST00000493455 K7EP13 123 aa10.59□□□□□ -0.71
HPS4-216ENST00000493455 TIMM21Q9BVV7 248 aa10.59□□□□□ -0.71
HPS4-216ENST00000493455 CDC42SE2Q9NRR3 84 aa10.59□□□□□ -0.71
HPS4-216ENST00000493455 RYR2Q92736 4967 aa10.58□□□□□ -0.72
HPS4-216ENST00000493455 KMT2CQ8NEZ4 4911 aaKnown RBP10.58□□□□□ -0.72
HPS4-216ENST00000493455 TRAV8-3A0A0A6YYJ7 113 aa10.58□□□□□ -0.72
HPS4-216ENST00000493455 NUPR1O60356 82 aa10.58□□□□□ -0.72
HPS4-216ENST00000493455 LINC00310P59036 64 aa10.58□□□□□ -0.72
HPS4-216ENST00000493455 DNAH6Q9C0G6 4158 aa10.58□□□□□ -0.72
HPS4-216ENST00000493455 IGLV4-3A0A075B6K6 122 aa10.57□□□□□ -0.72
HPS4-216ENST00000493455 A0A096LNJ9 63 aa10.57□□□□□ -0.72
HPS4-216ENST00000493455 PSCAO43653 123 aa10.57□□□□□ -0.72
HPS4-216ENST00000493455 ZC2HC1BQ5TFG8 222 aa10.57□□□□□ -0.72
HPS4-216ENST00000493455 Q6ZN92 141 aa10.57□□□□□ -0.72
HPS4-216ENST00000493455 C1orf43Q9BWL3 253 aa10.57□□□□□ -0.72
HPS4-216ENST00000493455 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
HPS4-216ENST00000493455 IFITM10A6NMD0 228 aa10.56□□□□□ -0.72
HPS4-216ENST00000493455 RMI2Q96E14 147 aa10.56□□□□□ -0.72
HPS4-216ENST00000493455 TMEM141Q96I45 108 aa10.56□□□□□ -0.72
HPS4-216ENST00000493455 PYGO1Q9Y3Y4 419 aa10.56□□□□□ -0.72
HPS4-216ENST00000493455 CSDC2Q9Y534 153 aaKnown RBP10.56□□□□□ -0.72
HPS4-216ENST00000493455 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
HPS4-216ENST00000493455 MIAQ16674 131 aa10.55□□□□□ -0.72
HPS4-216ENST00000493455 TEX43Q6ZNM6 134 aa10.55□□□□□ -0.72
HPS4-216ENST00000493455 ERASQ7Z444 233 aa10.55□□□□□ -0.72
HPS4-216ENST00000493455 NFE4Q86UQ8 179 aa10.55□□□□□ -0.72
HPS4-216ENST00000493455 PRR34Q9NV39 138 aa10.55□□□□□ -0.72
HPS4-216ENST00000493455 KMT2AQ03164 3969 aa10.55□□□□□ -0.72
HPS4-216ENST00000493455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.54□□□□□ -0.72
HPS4-216ENST00000493455 MRPS36P82909 103 aaKnown RBP10.54□□□□□ -0.72
HPS4-216ENST00000493455 FAM104AQ969W3 186 aa10.54□□□□□ -0.72
HPS4-216ENST00000493455 TIMM17AQ99595 171 aa10.54□□□□□ -0.72
HPS4-216ENST00000493455 VCX2Q9H322 139 aa10.54□□□□□ -0.72
HPS4-216ENST00000493455 LINC00959A0A1B0GUT2 108 aa10.53□□□□□ -0.72
HPS4-216ENST00000493455 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
HPS4-216ENST00000493455 FABP4P15090 132 aa10.53□□□□□ -0.72
HPS4-216ENST00000493455 SS18Q15532 418 aa10.53□□□□□ -0.72
HPS4-216ENST00000493455 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
HPS4-216ENST00000493455 C2orf88Q9BSF0 95 aa10.53□□□□□ -0.72
HPS4-216ENST00000493455 GAGE12HA6NDE8 117 aa10.52□□□□□ -0.73
HPS4-216ENST00000493455 CCL25O15444 150 aa10.52□□□□□ -0.73
HPS4-216ENST00000493455 XCL1P47992 114 aa10.52□□□□□ -0.73
HPS4-216ENST00000493455 PAPPA-AS1Q5QFB9 102 aa10.52□□□□□ -0.73
HPS4-216ENST00000493455 CHCHD10Q8WYQ3 142 aaPredicted RBP10.52□□□□□ -0.73
HPS4-216ENST00000493455 TM2D2Q9BX73 214 aa10.52□□□□□ -0.73
HPS4-216ENST00000493455 TRAV8-4A0A0B4J246 113 aa10.51□□□□□ -0.73
HPS4-216ENST00000493455 H0Y8G0 127 aa10.51□□□□□ -0.73
HPS4-216ENST00000493455 RTL8CO15255 209 aa10.51□□□□□ -0.73
HPS4-216ENST00000493455 ATP5LO75964 103 aa10.51□□□□□ -0.73
HPS4-216ENST00000493455 S100A6P06703 90 aa10.51□□□□□ -0.73
HPS4-216ENST00000493455 LINC00173Q6ZV60 143 aa10.51□□□□□ -0.73
HPS4-216ENST00000493455 LECT2O14960 151 aa10.5□□□□□ -0.73
HPS4-216ENST00000493455 LEPROTL1O95214 131 aa10.5□□□□□ -0.73
HPS4-216ENST00000493455 Q6ZRN7 208 aaPredicted RBP10.5□□□□□ -0.73
HPS4-216ENST00000493455 BAALCQ8WXS3 180 aa10.5□□□□□ -0.73
HPS4-216ENST00000493455 PRSS29PA6NIE9 313 aa10.49□□□□□ -0.73
HPS4-216ENST00000493455 PRSS1P07477 247 aa10.49□□□□□ -0.73
HPS4-216ENST00000493455 IFI27L1Q96BM0 104 aa10.49□□□□□ -0.73
HPS4-216ENST00000493455 AMELXQ99217 191 aa10.49□□□□□ -0.73
HPS4-216ENST00000493455 COX11Q9Y6N1 276 aa10.49□□□□□ -0.73
HPS4-216ENST00000493455 NPSP0C0P6 89 aa10.48□□□□□ -0.73
HPS4-216ENST00000493455 TMA7Q9Y2S6 64 aaKnown RBP10.48□□□□□ -0.73
HPS4-216ENST00000493455 TNP2Q05952 138 aa10.47□□□□□ -0.73
HPS4-216ENST00000493455 PMVKQ15126 192 aa10.47□□□□□ -0.73
HPS4-216ENST00000493455 RYR3Q15413 4870 aa10.46□□□□□ -0.73
HPS4-216ENST00000493455 UBE2D1P51668 147 aa10.46□□□□□ -0.73
HPS4-216ENST00000493455 COA6Q5JTJ3 125 aaKnown RBP10.46□□□□□ -0.73
HPS4-216ENST00000493455 MAPKAPK5-AS1Q8N8E1 139 aa10.46□□□□□ -0.73
HPS4-216ENST00000493455 CST9LQ9H4G1 147 aa10.46□□□□□ -0.73
HPS4-216ENST00000493455 HSPB8Q9UJY1 196 aa10.46□□□□□ -0.73
HPS4-216ENST00000493455 A0A0J9YXV3 536 aa10.45□□□□□ -0.74
HPS4-216ENST00000493455 KRTAP26-1Q6PEX3 210 aa10.45□□□□□ -0.74
HPS4-216ENST00000493455 CD164L2Q6UWJ8 174 aa10.45□□□□□ -0.74
HPS4-216ENST00000493455 C5orf38Q86SI9 138 aa10.45□□□□□ -0.74
HPS4-216ENST00000493455 S100A2P29034 98 aa10.44□□□□□ -0.74
HPS4-216ENST00000493455 SNRPEP62304 92 aaKnown RBP10.44□□□□□ -0.74
HPS4-216ENST00000493455 COX6A2Q02221 97 aa10.44□□□□□ -0.74
HPS4-216ENST00000493455 FOXI1Q12951 378 aa10.44□□□□□ -0.74
HPS4-216ENST00000493455 WFDC2Q14508 124 aa10.44□□□□□ -0.74
HPS4-216ENST00000493455 LINC00242Q5T6M2 205 aa10.44□□□□□ -0.74
HPS4-216ENST00000493455 GEMIN7Q9H840 131 aaKnown RBP10.44□□□□□ -0.74
HPS4-216ENST00000493455 USP17L23D6RBM5 183 aa10.43□□□□□ -0.74
HPS4-216ENST00000493455 MALP21145 153 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms