RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SMCO4Q9NRQ5 59 aa5.47□□□□□ -1.53
TM4SF1-204ENST00000493348 TRAPPC1Q9Y5R8 145 aa5.47□□□□□ -1.53
TM4SF1-204ENST00000493348 TGIF2-C20orf24A0A0A6YYL0 155 aa5.46□□□□□ -1.54
TM4SF1-204ENST00000493348 KIAA1644Q3SXP7 199 aa5.46□□□□□ -1.54
TM4SF1-204ENST00000493348 C14orf177Q52M58 125 aa5.46□□□□□ -1.54
TM4SF1-204ENST00000493348 ORMDL2Q53FV1 153 aa5.46□□□□□ -1.54
TM4SF1-204ENST00000493348 IGLV10-54A0A075B6I4 117 aa5.45□□□□□ -1.54
TM4SF1-204ENST00000493348 K7EMI3 77 aa5.45□□□□□ -1.54
TM4SF1-204ENST00000493348 ESDP10768 282 aa5.45□□□□□ -1.54
TM4SF1-204ENST00000493348 IFI27P40305 119 aaPredicted RBP5.45□□□□□ -1.54
TM4SF1-204ENST00000493348 SS18Q15532 418 aa5.45□□□□□ -1.54
TM4SF1-204ENST00000493348 Q8N8P6 123 aa5.45□□□□□ -1.54
TM4SF1-204ENST00000493348 IGLV4-60A0A075B6I1 120 aa5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 A0A087WTM6 91 aa5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 C16orf90A8MZG2 172 aa5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 ENHOQ6UWT2 76 aa5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 Q6ZRN7 208 aaPredicted RBP5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 FA2HQ7L5A8 372 aa5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 SPATA12Q7Z6I5 190 aa5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 MRPL52Q86TS9 123 aaKnown RBP5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 ZNF664Q8N3J9 261 aa5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 C20orf203Q8NBC4 194 aa5.44□□□□□ -1.54
TM4SF1-204ENST00000493348 PRSS47A8MTI9 375 aa5.43□□□□□ -1.54
TM4SF1-204ENST00000493348 PAPPA-AS1Q5QFB9 102 aa5.43□□□□□ -1.54
TM4SF1-204ENST00000493348 CFAP161Q6P656 301 aa5.43□□□□□ -1.54
TM4SF1-204ENST00000493348 Q6ZN92 141 aa5.43□□□□□ -1.54
TM4SF1-204ENST00000493348 BAALCQ8WXS3 180 aa5.43□□□□□ -1.54
TM4SF1-204ENST00000493348 SPANXA1Q9NS26 97 aa5.43□□□□□ -1.54
TM4SF1-204ENST00000493348 PRR34Q9NV39 138 aa5.43□□□□□ -1.54
TM4SF1-204ENST00000493348 CYSLTR1Q9Y271 337 aa5.43□□□□□ -1.54
TM4SF1-204ENST00000493348 FAT2Q9NYQ8 4349 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 IGLV5-52A0A0A0MRZ9 124 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 LINC01549A6NIU2 74 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 LECT2O14960 151 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 CCL25O15444 150 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 RAB5BP61020 215 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 RPL39P62891 51 aaKnown RBP5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 CDPF1Q6NVV7 123 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 CBLN2Q8IUK8 224 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 NTN5Q8WTR8 489 aaPredicted RBP5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 C2orf88Q9BSF0 95 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 TIMM21Q9BVV7 248 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 AP5S1Q9NUS5 200 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 UBE2D4Q9Y2X8 147 aa5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 CSDC2Q9Y534 153 aaKnown RBP5.42□□□□□ -1.54
TM4SF1-204ENST00000493348 TRAV13-1A0A0B4J241 112 aa5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 C1orf196B1AJZ1 125 aa5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 MALP21145 153 aa5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 C2orf66Q6UXQ4 117 aa5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 Q8N814 137 aa5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 CHCHD10Q8WYQ3 142 aaPredicted RBP5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 HECTD4Q9Y4D8 3996 aa5.41□□□□□ -1.54
TM4SF1-204ENST00000493348 PKD1P98161 4303 aa5.4□□□□□ -1.54
TM4SF1-204ENST00000493348 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.4□□□□□ -1.54
TM4SF1-204ENST00000493348 LINC00959A0A1B0GUT2 108 aa5.4□□□□□ -1.54
TM4SF1-204ENST00000493348 IFITM10A6NMD0 228 aa5.4□□□□□ -1.54
TM4SF1-204ENST00000493348 XCL1P47992 114 aa5.4□□□□□ -1.54
TM4SF1-204ENST00000493348 RNASE13Q5GAN3 156 aaKnown RBP5.4□□□□□ -1.54
TM4SF1-204ENST00000493348 TEX43Q6ZNM6 134 aa5.4□□□□□ -1.54
TM4SF1-204ENST00000493348 TMEM141Q96I45 108 aa5.4□□□□□ -1.54
TM4SF1-204ENST00000493348 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 hDV102S1A0JD36 115 aa5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 LRCOL1A6NCL2 159 aa5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 USP17L23D6RBM5 183 aa5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 GCSHP23434 173 aa5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 MRPS36P82909 103 aaKnown RBP5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 Q6ZUT4 128 aa5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 SCGB3A1Q96QR1 104 aa5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 VCX2Q9H322 139 aa5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 PYGO1Q9Y3Y4 419 aa5.39□□□□□ -1.55
TM4SF1-204ENST00000493348 COX7A2LO14548 114 aa5.38□□□□□ -1.55
TM4SF1-204ENST00000493348 APOMO95445 188 aa5.38□□□□□ -1.55
TM4SF1-204ENST00000493348 NPSP0C0P6 89 aa5.38□□□□□ -1.55
TM4SF1-204ENST00000493348 LINC00614P0C842 121 aa5.38□□□□□ -1.55
TM4SF1-204ENST00000493348 CD164L2Q6UWJ8 174 aa5.38□□□□□ -1.55
TM4SF1-204ENST00000493348 BAGE3Q86Y29 109 aa5.38□□□□□ -1.55
TM4SF1-204ENST00000493348 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
TM4SF1-204ENST00000493348 IGHV1-58A0A0C4DH39 117 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 S100A1P23297 94 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 SEC11AP67812 179 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 C18orf32Q8TCD1 76 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 TOMM6Q96B49 74 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 TIMM17AQ99595 171 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 KRTAP4-12Q9BQ66 201 aa5.37□□□□□ -1.55
TM4SF1-204ENST00000493348 DNAH11Q96DT5 4516 aa5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 IGLV4-3A0A075B6K6 122 aa5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 HBDP02042 147 aa5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 TRGC2P03986 189 aa5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 NDUFA6P56556 154 aa5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 ERASQ7Z444 233 aa5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 MAPKAPK5-AS1Q8N8E1 139 aa5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 OPRPNQ99935 248 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms