RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 Q8N976 141 aa9.12□□□□□ -0.95
MSH6-208ENST00000493177 OR5A1Q8NGJ0 315 aa9.12□□□□□ -0.95
MSH6-208ENST00000493177 TOMM6Q96B49 74 aa9.12□□□□□ -0.95
MSH6-208ENST00000493177 ZNF25P17030 456 aaPredicted RBP9.11□□□□□ -0.95
MSH6-208ENST00000493177 PDZD11Q5EBL8 140 aa9.11□□□□□ -0.95
MSH6-208ENST00000493177 COA6Q5JTJ3 125 aaKnown RBP9.11□□□□□ -0.95
MSH6-208ENST00000493177 SCGB3A1Q96QR1 104 aa9.11□□□□□ -0.95
MSH6-208ENST00000493177 UBE2D4Q9Y2X8 147 aa9.11□□□□□ -0.95
MSH6-208ENST00000493177 FRAS1Q86XX4 4008 aa9.1□□□□□ -0.95
MSH6-208ENST00000493177 A0A096LNJ9 63 aa9.1□□□□□ -0.95
MSH6-208ENST00000493177 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
MSH6-208ENST00000493177 ANGP03950 147 aaKnown RBP9.1□□□□□ -0.95
MSH6-208ENST00000493177 DNAH10OSP0CZ25 163 aa9.1□□□□□ -0.95
MSH6-208ENST00000493177 LINC01556Q5JQF7 62 aa9.1□□□□□ -0.95
MSH6-208ENST00000493177 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
MSH6-208ENST00000493177 SPANXA1Q9NS26 97 aa9.1□□□□□ -0.95
MSH6-208ENST00000493177 IGLV4-60A0A075B6I1 120 aa9.09□□□□□ -0.95
MSH6-208ENST00000493177 TRAV9-2A0A087WT02 112 aa9.09□□□□□ -0.95
MSH6-208ENST00000493177 A0A1B0GUV1 79 aa9.09□□□□□ -0.95
MSH6-208ENST00000493177 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
MSH6-208ENST00000493177 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
MSH6-208ENST00000493177 KLK12Q9UKR0 248 aa9.09□□□□□ -0.95
MSH6-208ENST00000493177 IGKV3OR2-268A0A0C4DH90 116 aa9.08□□□□□ -0.96
MSH6-208ENST00000493177 LEPROTL1O95214 131 aa9.08□□□□□ -0.96
MSH6-208ENST00000493177 FABP4P15090 132 aa9.08□□□□□ -0.96
MSH6-208ENST00000493177 SNRPEP62304 92 aaKnown RBP9.08□□□□□ -0.96
MSH6-208ENST00000493177 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
MSH6-208ENST00000493177 Q6ZN92 141 aa9.08□□□□□ -0.96
MSH6-208ENST00000493177 Q6ZUT4 128 aa9.08□□□□□ -0.96
MSH6-208ENST00000493177 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
MSH6-208ENST00000493177 OPRPNQ99935 248 aaPredicted RBP9.08□□□□□ -0.96
MSH6-208ENST00000493177 PYGO1Q9Y3Y4 419 aa9.08□□□□□ -0.96
MSH6-208ENST00000493177 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.07□□□□□ -0.96
MSH6-208ENST00000493177 ATP5LO75964 103 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 CRPP02741 224 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 S100A2P29034 98 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 TNP2Q05952 138 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 CLPSL2Q6UWE3 100 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 ERASQ7Z444 233 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 LINC00269Q8N2A0 174 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 ZNF664Q8N3J9 261 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 C10orf126Q8N4M7 172 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 TIMM17AQ99595 171 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
MSH6-208ENST00000493177 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
MSH6-208ENST00000493177 IGIPA6NJ69 53 aa9.06□□□□□ -0.96
MSH6-208ENST00000493177 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
MSH6-208ENST00000493177 HSPB8Q9UJY1 196 aa9.06□□□□□ -0.96
MSH6-208ENST00000493177 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
MSH6-208ENST00000493177 PAPPA-AS1Q5QFB9 102 aa9.05□□□□□ -0.96
MSH6-208ENST00000493177 TEX43Q6ZNM6 134 aa9.05□□□□□ -0.96
MSH6-208ENST00000493177 LINC00173Q6ZV60 143 aa9.05□□□□□ -0.96
MSH6-208ENST00000493177 HIST3H2BBQ8N257 126 aa9.05□□□□□ -0.96
MSH6-208ENST00000493177 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
MSH6-208ENST00000493177 VCX2Q9H322 139 aa9.05□□□□□ -0.96
MSH6-208ENST00000493177 NPSP0C0P6 89 aa9.04□□□□□ -0.96
MSH6-208ENST00000493177 REG3AQ06141 175 aa9.04□□□□□ -0.96
MSH6-208ENST00000493177 ZC2HC1BQ5TFG8 222 aa9.04□□□□□ -0.96
MSH6-208ENST00000493177 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
MSH6-208ENST00000493177 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
MSH6-208ENST00000493177 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
MSH6-208ENST00000493177 IFITM10A6NMD0 228 aa9.03□□□□□ -0.96
MSH6-208ENST00000493177 IBA57-AS1B1ANH7 110 aa9.03□□□□□ -0.96
MSH6-208ENST00000493177 H0Y8G0 127 aa9.03□□□□□ -0.96
MSH6-208ENST00000493177 K7EP13 123 aa9.03□□□□□ -0.96
MSH6-208ENST00000493177 PRSS1P07477 247 aa9.03□□□□□ -0.96
MSH6-208ENST00000493177 BAALCQ8WXS3 180 aa9.03□□□□□ -0.96
MSH6-208ENST00000493177 Q9HAA7 133 aa9.03□□□□□ -0.96
MSH6-208ENST00000493177 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
MSH6-208ENST00000493177 C16orf90A8MZG2 172 aa9.02□□□□□ -0.97
MSH6-208ENST00000493177 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
MSH6-208ENST00000493177 MAP1LC3CQ9BXW4 147 aa9.02□□□□□ -0.97
MSH6-208ENST00000493177 PMVKQ15126 192 aa9.01□□□□□ -0.97
MSH6-208ENST00000493177 SS18Q15532 418 aa9.01□□□□□ -0.97
MSH6-208ENST00000493177 ENHOQ6UWT2 76 aa9.01□□□□□ -0.97
MSH6-208ENST00000493177 PACRGQ96M98 296 aaPredicted RBP9.01□□□□□ -0.97
MSH6-208ENST00000493177 AMELXQ99217 191 aa9.01□□□□□ -0.97
MSH6-208ENST00000493177 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
MSH6-208ENST00000493177 TRAV8-3A0A0A6YYJ7 113 aa9□□□□□ -0.97
MSH6-208ENST00000493177 EREGO14944 169 aa9□□□□□ -0.97
MSH6-208ENST00000493177 MIAQ16674 131 aa9□□□□□ -0.97
MSH6-208ENST00000493177 NFE4Q86UQ8 179 aa9□□□□□ -0.97
MSH6-208ENST00000493177 HIST1H2BLQ99880 126 aa9□□□□□ -0.97
MSH6-208ENST00000493177 CST9LQ9H4G1 147 aa9□□□□□ -0.97
MSH6-208ENST00000493177 PRR34Q9NV39 138 aa9□□□□□ -0.97
MSH6-208ENST00000493177 DNAH17Q9UFH2 4485 aa8.99□□□□□ -0.97
MSH6-208ENST00000493177 IGKV2D-24A0A075B6R9 120 aa8.99□□□□□ -0.97
MSH6-208ENST00000493177 LINC00959A0A1B0GUT2 108 aa8.99□□□□□ -0.97
MSH6-208ENST00000493177 KRTDAPP60985 99 aa8.99□□□□□ -0.97
MSH6-208ENST00000493177 SPATA12Q7Z6I5 190 aa8.99□□□□□ -0.97
MSH6-208ENST00000493177 RMI2Q96E14 147 aa8.99□□□□□ -0.97
MSH6-208ENST00000493177 C1orf43Q9BWL3 253 aa8.99□□□□□ -0.97
MSH6-208ENST00000493177 HECTD4Q9Y4D8 3996 aa8.98□□□□□ -0.97
MSH6-208ENST00000493177 DNAH2Q9P225 4427 aa8.98□□□□□ -0.97
MSH6-208ENST00000493177 TRAV8-4A0A0B4J246 113 aa8.98□□□□□ -0.97
MSH6-208ENST00000493177 TRAV12-1A0A0B4J245 112 aa8.97□□□□□ -0.97
MSH6-208ENST00000493177 CCL25O15444 150 aa8.97□□□□□ -0.97
MSH6-208ENST00000493177 XCL1P47992 114 aa8.97□□□□□ -0.97
MSH6-208ENST00000493177 UBE2D1P51668 147 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms