RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
GPNMB-214ENST00000492858 PKIGQ9Y2B9 76 aa7.33□□□□□ -1.24
GPNMB-214ENST00000492858 F8W036 122 aa7.32□□□□□ -1.24
GPNMB-214ENST00000492858 MT-ND6P03923 174 aa7.32□□□□□ -1.24
GPNMB-214ENST00000492858 OR5AL1P0C617 328 aa7.32□□□□□ -1.24
GPNMB-214ENST00000492858 CEBPGP53567 150 aa7.32□□□□□ -1.24
GPNMB-214ENST00000492858 RPS20P60866 119 aaKnown RBP7.32□□□□□ -1.24
GPNMB-214ENST00000492858 SSTP61278 116 aa7.32□□□□□ -1.24
GPNMB-214ENST00000492858 RPP21Q9H633 154 aaKnown RBP7.32□□□□□ -1.24
GPNMB-214ENST00000492858 SMIM17P0DL12 118 aa7.31□□□□□ -1.24
GPNMB-214ENST00000492858 CTRLP40313 264 aa7.31□□□□□ -1.24
GPNMB-214ENST00000492858 SPANXN1Q5VSR9 72 aa7.31□□□□□ -1.24
GPNMB-214ENST00000492858 TMEM242Q9NWH2 141 aa7.31□□□□□ -1.24
GPNMB-214ENST00000492858 SMIM27A0A1W2PRY6 76 aa7.3□□□□□ -1.24
GPNMB-214ENST00000492858 UBE2L6O14933 153 aa7.3□□□□□ -1.24
GPNMB-214ENST00000492858 ADIRFQ15847 76 aa7.3□□□□□ -1.24
GPNMB-214ENST00000492858 C1orf137Q5JT78 98 aa7.3□□□□□ -1.24
GPNMB-214ENST00000492858 OR2D3Q8NGH3 330 aa7.3□□□□□ -1.24
GPNMB-214ENST00000492858 TSKUQ8WUA8 353 aa7.3□□□□□ -1.24
GPNMB-214ENST00000492858 CHCHD10Q8WYQ3 142 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-214ENST00000492858 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
GPNMB-214ENST00000492858 CARD19Q96LW7 228 aa7.3□□□□□ -1.24
GPNMB-214ENST00000492858 A8MWL6 223 aa7.29□□□□□ -1.24
GPNMB-214ENST00000492858 M0QY20 66 aa7.29□□□□□ -1.24
GPNMB-214ENST00000492858 PPP1R2P9O14990 202 aa7.29□□□□□ -1.24
GPNMB-214ENST00000492858 GATCO43716 136 aaKnown RBP7.29□□□□□ -1.24
GPNMB-214ENST00000492858 FER1L6-AS1Q8NA97 138 aa7.29□□□□□ -1.24
GPNMB-214ENST00000492858 DIRC1Q969H9 104 aa7.29□□□□□ -1.24
GPNMB-214ENST00000492858 ANAPC16Q96DE5 110 aa7.29□□□□□ -1.24
GPNMB-214ENST00000492858 A0A1W2PNN7 141 aa7.28□□□□□ -1.24
GPNMB-214ENST00000492858 XKRY2A2RUG3 117 aa7.28□□□□□ -1.24
GPNMB-214ENST00000492858 F2Z2F3 143 aa7.28□□□□□ -1.24
GPNMB-214ENST00000492858 PTTG1IPP53801 180 aa7.28□□□□□ -1.24
GPNMB-214ENST00000492858 GAGE2BQ13066 116 aa7.28□□□□□ -1.24
GPNMB-214ENST00000492858 AP1S3Q96PC3 154 aa7.28□□□□□ -1.24
GPNMB-214ENST00000492858 IMMP2LQ96T52 175 aa7.28□□□□□ -1.24
GPNMB-214ENST00000492858 CTDSP1Q9GZU7 261 aa7.28□□□□□ -1.24
GPNMB-214ENST00000492858 IGLV1-50A0A075B6I6 118 aa7.27□□□□□ -1.25
GPNMB-214ENST00000492858 MT-ND4LP03901 98 aa7.27□□□□□ -1.25
GPNMB-214ENST00000492858 MGPP08493 103 aa7.27□□□□□ -1.25
GPNMB-214ENST00000492858 RHEBQ15382 184 aa7.27□□□□□ -1.25
GPNMB-214ENST00000492858 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 C7orf77A4D0Y5 90 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 AMTP48728 403 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 FOXI1Q12951 378 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 SUMO4Q6EEV6 95 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 SVBPQ8N300 66 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 GATD1Q8NB37 220 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 PGLYRP4Q96LB8 373 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
GPNMB-214ENST00000492858 HIGD1CA8MV81 97 aa7.25□□□□□ -1.25
GPNMB-214ENST00000492858 H0Y9J4 135 aa7.25□□□□□ -1.25
GPNMB-214ENST00000492858 LYZL1Q6UWQ5 148 aa7.25□□□□□ -1.25
GPNMB-214ENST00000492858 NUP35Q8NFH5 326 aa7.25□□□□□ -1.25
GPNMB-214ENST00000492858 NAT8BQ9UHF3 227 aa7.25□□□□□ -1.25
GPNMB-214ENST00000492858 IGHV1-58A0A0C4DH39 117 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 LOC107984640A0A0U1RRK4 108 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 A0A1B0GXF2 115 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 SNAPINO95295 136 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 APOC3P02656 99 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 IGLV7-43P04211 117 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 XCL1P47992 114 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 SYCNQ0VAF6 134 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 COTL1Q14019 142 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-214ENST00000492858 PHF5AQ7RTV0 110 aaKnown RBP7.24□□□□□ -1.25
GPNMB-214ENST00000492858 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
GPNMB-214ENST00000492858 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
GPNMB-214ENST00000492858 TRAV9-1A0A075B6T8 112 aa7.23□□□□□ -1.25
GPNMB-214ENST00000492858 KRTAP1-4P0C5Y4 121 aa7.23□□□□□ -1.25
GPNMB-214ENST00000492858 UBE2D1P51668 147 aa7.23□□□□□ -1.25
GPNMB-214ENST00000492858 RASL11AQ6T310 242 aa7.23□□□□□ -1.25
GPNMB-214ENST00000492858 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
GPNMB-214ENST00000492858 NTF3P20783 257 aa7.22□□□□□ -1.25
GPNMB-214ENST00000492858 AMMECR1LQ6DCA0 310 aa7.22□□□□□ -1.25
GPNMB-214ENST00000492858 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
GPNMB-214ENST00000492858 ATP5L2Q7Z4Y8 100 aa7.22□□□□□ -1.25
GPNMB-214ENST00000492858 NIT2Q9NQR4 276 aa7.22□□□□□ -1.25
GPNMB-214ENST00000492858 A0A1B0GUT8 65 aa7.21□□□□□ -1.26
GPNMB-214ENST00000492858 A0A1B0GW15 77 aa7.21□□□□□ -1.26
GPNMB-214ENST00000492858 RPL13AP40429 203 aaKnown RBP7.21□□□□□ -1.26
GPNMB-214ENST00000492858 CCL25O15444 150 aa7.2□□□□□ -1.26
GPNMB-214ENST00000492858 TSPAN13O95857 204 aa7.2□□□□□ -1.26
GPNMB-214ENST00000492858 FGF6P10767 208 aa7.2□□□□□ -1.26
GPNMB-214ENST00000492858 CAMPP49913 170 aa7.2□□□□□ -1.26
GPNMB-214ENST00000492858 TPPP3Q9BW30 176 aa7.2□□□□□ -1.26
GPNMB-214ENST00000492858 TMEM191AQ9H0A3 160 aa7.2□□□□□ -1.26
GPNMB-214ENST00000492858 TRBV24-1A0A075B6N3 115 aa7.19□□□□□ -1.26
GPNMB-214ENST00000492858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.19□□□□□ -1.26
GPNMB-214ENST00000492858 A0A087WZ39 114 aa7.19□□□□□ -1.26
GPNMB-214ENST00000492858 IGKV2-29A2NJV5 120 aaPredicted RBP7.19□□□□□ -1.26
GPNMB-214ENST00000492858 RIGQ13278 110 aa7.19□□□□□ -1.26
GPNMB-214ENST00000492858 BTF3L4Q96K17 158 aa7.19□□□□□ -1.26
GPNMB-214ENST00000492858 RPS10P5Q9NQ39 176 aa7.19□□□□□ -1.26
GPNMB-214ENST00000492858 APOMO95445 188 aa7.18□□□□□ -1.26
GPNMB-214ENST00000492858 TRGC1P0CF51 173 aa7.18□□□□□ -1.26
GPNMB-214ENST00000492858 S100A1P23297 94 aa7.18□□□□□ -1.26
GPNMB-214ENST00000492858 RPL18AQ02543 176 aaKnown RBP7.18□□□□□ -1.26
GPNMB-214ENST00000492858 OR5A1Q8NGJ0 315 aa7.18□□□□□ -1.26
GPNMB-214ENST00000492858 IGLV4-69A0A075B6H9 119 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms