RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 PPIP5K1Q6PFW1 1433 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 FLNAP21333 2647 aaKnown RBP0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 CFTRP13569 1480 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 TRBV7-3A0A075B6L6 115 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 A0A1B0GWA3 101 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 CHKB-CPT1BH3BT56 60 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 SFT2D2O95562 160 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 COX6CP09669 75 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 FGF7P21781 194 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 GNG11P61952 73 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 BTG2P78543 158 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 MRPS10P82664 201 aaKnown RBP0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 CATR1Q13166 79 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 AMELXQ99217 191 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 C12orf57Q99622 126 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 NXT2Q9NPJ8 142 aaKnown RBP0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 HRNRQ86YZ3 2850 aaPredicted RBP0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 PIEZO2Q9H5I5 2752 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 CELSR1Q9NYQ6 3014 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 C2CD3Q4AC94 2353 aa0.08□□□□□ -2.4
HMGB1P30-201ENST00000492455 PKDREJQ9NTG1 2253 aa0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 ZNF292O60281 2723 aa0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 BCE1O60756 84 aa0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 SPRR1AP35321 89 aa0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 ATP5EP56381 51 aaPredicted RBP0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 SARNPP82979 210 aaKnown RBP0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 NDUFA4L2Q9NRX3 87 aa0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 WDR7Q9Y4E6 1490 aa0.07□□□□□ -2.4
HMGB1P30-201ENST00000492455 LRRC37A3O60309 1634 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 NHSL1Q5SYE7 1610 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 DOPEY2Q9Y3R5 2298 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 CCDC141Q6ZP82 1450 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 PXDNQ92626 1479 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 TRBV7-4A0A0J9YYF1 115 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 UBE2L5PA0A1B0GUS4 154 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 LOC100130705A0A1B0GUX0 176 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 IGLC7A0M8Q6 106 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 NAP1L6A6NFF2 107 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 K7EQZ3 153 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 PI4KAP42356 2102 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 GTF2H5Q6ZYL4 71 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 C5orf38Q86SI9 138 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 TMEM263Q8WUH6 116 aaKnown RBP0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 MANBALQ9NQG1 85 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 ARL2-SNX15V9GYD0 113 aa0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 SIPA1L3O60292 1781 aaPredicted RBP0.06□□□□□ -2.4
HMGB1P30-201ENST00000492455 PTPRQQ9UMZ3 2332 aa0.05□□□□□ -2.4
HMGB1P30-201ENST00000492455 C10orf71Q711Q0 1435 aa0.05□□□□□ -2.4
HMGB1P30-201ENST00000492455 HMGN4O00479 90 aa0.05□□□□□ -2.4
HMGB1P30-201ENST00000492455 COMMD6Q7Z4G1 85 aa0.05□□□□□ -2.4
HMGB1P30-201ENST00000492455 PSENENQ9NZ42 101 aa0.05□□□□□ -2.4
HMGB1P30-201ENST00000492455 LINC01558Q9Y6Z2 57 aa0.05□□□□□ -2.4
HMGB1P30-201ENST00000492455 MBD5Q9P267 1494 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 GOLGA4Q13439 2230 aaKnown RBP0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 CRYM-AS1A6NIL9 109 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 I3L3M4 83 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 SNCAP37840 140 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 GNGT1P63211 74 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 SEC11AP67812 179 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 RPL13AP3Q6NVV1 102 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 CRIPTQ9P021 101 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 GNG8Q9UK08 70 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 AP4S1Q9Y587 144 aa0.04□□□□□ -2.4
HMGB1P30-201ENST00000492455 MRC1P22897 1456 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 WNK2Q9Y3S1 2297 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 PLCE1Q9P212 2302 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 SETBP1Q9Y6X0 1596 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 MYH9P35579 1960 aaKnown RBP0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 CACNA1AO00555 2505 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 TRAV30A0A087WSZ9 112 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 EFCAB10A6NFE3 127 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 H3BQF6 201 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 IGLC1P0CG04 106 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 S100A1P23297 94 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 GNG4P50150 75 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 DEFB105AQ8NG35 78 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 PP6455Q8WZ26 134 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 FAM167A-AS1Q96KT0 104 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 CGREF1Q99674 301 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 PRO1854Q9UHT4 67 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 IFT172Q9UG01 1749 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 SPEF2Q9C093 1822 aa0.03□□□□□ -2.4
HMGB1P30-201ENST00000492455 APC2O95996 2303 aa0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 CPSF4LA6NMK7 179 aaKnown RBP0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 TMEM262E9PQX1 116 aa0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 SAA2P0DJI9 122 aaPredicted RBP0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 PPP3R1P63098 170 aa0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 TSLPQ969D9 159 aa0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 TMEM203Q969S6 136 aa0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 ROCK2O75116 1388 aaKnown RBP0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 CPSF1Q10570 1443 aaKnown RBP0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 LRRC37A2A6NM11 1700 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 NWD2Q9ULI1 1742 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 TENM4Q6N022 2769 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 PKD1L1Q8TDX9 2849 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 NCOR1O75376 2440 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 TMEM218A2RU14 115 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 H0YGG7 62 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 H3BQ15 152 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms