RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 C1orf43Q9BWL3 253 aa15.52■□□□□ 0.08
SCN5A-213ENST00000491944 ZNF664Q8N3J9 261 aa15.51■□□□□ 0.07
SCN5A-213ENST00000491944 SPANXA1Q9NS26 97 aa15.51■□□□□ 0.07
SCN5A-213ENST00000491944 CYSLTR1Q9Y271 337 aa15.51■□□□□ 0.07
SCN5A-213ENST00000491944 CSDC2Q9Y534 153 aaKnown RBP15.51■□□□□ 0.07
SCN5A-213ENST00000491944 FRAS1Q86XX4 4008 aa15.51■□□□□ 0.07
SCN5A-213ENST00000491944 C2orf66Q6UXQ4 117 aa15.5■□□□□ 0.07
SCN5A-213ENST00000491944 CDC42SE2Q9NRR3 84 aa15.5■□□□□ 0.07
SCN5A-213ENST00000491944 COX11Q9Y6N1 276 aa15.5■□□□□ 0.07
SCN5A-213ENST00000491944 IGLV10-54A0A075B6I4 117 aa15.49■□□□□ 0.07
SCN5A-213ENST00000491944 Q6ZUT4 128 aa15.49■□□□□ 0.07
SCN5A-213ENST00000491944 LINC01546A6NGU7 62 aa15.49■□□□□ 0.07
SCN5A-213ENST00000491944 G0S2P27469 103 aa15.49■□□□□ 0.07
SCN5A-213ENST00000491944 RNASE13Q5GAN3 156 aaKnown RBP15.49■□□□□ 0.07
SCN5A-213ENST00000491944 AP5S1Q9NUS5 200 aa15.48■□□□□ 0.07
SCN5A-213ENST00000491944 TRAV8-4A0A0B4J246 113 aa15.47■□□□□ 0.07
SCN5A-213ENST00000491944 LINC00614P0C842 121 aa15.47■□□□□ 0.07
SCN5A-213ENST00000491944 RAB5BP61020 215 aa15.47■□□□□ 0.07
SCN5A-213ENST00000491944 OPRPNQ99935 248 aaPredicted RBP15.47■□□□□ 0.07
SCN5A-213ENST00000491944 URB1-AS1Q96HZ7 61 aa15.46■□□□□ 0.07
SCN5A-213ENST00000491944 PYGO1Q9Y3Y4 419 aa15.46■□□□□ 0.07
SCN5A-213ENST00000491944 DNAH2Q9P225 4427 aa15.46■□□□□ 0.06
SCN5A-213ENST00000491944 MRPS36P82909 103 aaKnown RBP15.44■□□□□ 0.06
SCN5A-213ENST00000491944 TOMM6Q96B49 74 aa15.44■□□□□ 0.06
SCN5A-213ENST00000491944 LINC00959A0A1B0GUT2 108 aa15.43■□□□□ 0.06
SCN5A-213ENST00000491944 BAGE3Q86Y29 109 aa15.43■□□□□ 0.06
SCN5A-213ENST00000491944 MAPKAPK5-AS1Q8N8E1 139 aa15.43■□□□□ 0.06
SCN5A-213ENST00000491944 DNAH10Q8IVF4 4471 aa15.43■□□□□ 0.06
SCN5A-213ENST00000491944 IGLV4-3A0A075B6K6 122 aa15.42■□□□□ 0.06
SCN5A-213ENST00000491944 EREGO14944 169 aa15.42■□□□□ 0.06
SCN5A-213ENST00000491944 FAM104AQ969W3 186 aa15.42■□□□□ 0.06
SCN5A-213ENST00000491944 A0A087WTM6 91 aa15.41■□□□□ 0.06
SCN5A-213ENST00000491944 SS18Q15532 418 aa15.41■□□□□ 0.06
SCN5A-213ENST00000491944 BAALCQ8WXS3 180 aa15.41■□□□□ 0.06
SCN5A-213ENST00000491944 CHCHD10Q8WYQ3 142 aaPredicted RBP15.41■□□□□ 0.06
SCN5A-213ENST00000491944 TMEM141Q96I45 108 aa15.41■□□□□ 0.06
SCN5A-213ENST00000491944 SCGB3A1Q96QR1 104 aa15.41■□□□□ 0.06
SCN5A-213ENST00000491944 TRAV13-1A0A0B4J241 112 aa15.4■□□□□ 0.06
SCN5A-213ENST00000491944 LECT2O14960 151 aa15.4■□□□□ 0.06
SCN5A-213ENST00000491944 PMCHL1Q16048 86 aa15.4■□□□□ 0.06
SCN5A-213ENST00000491944 KRTAP26-1Q6PEX3 210 aa15.4■□□□□ 0.06
SCN5A-213ENST00000491944 LRCOL1A6NCL2 159 aa15.39■□□□□ 0.05
SCN5A-213ENST00000491944 GAGE12HA6NDE8 117 aa15.39■□□□□ 0.05
SCN5A-213ENST00000491944 IGIPA6NJ69 53 aa15.39■□□□□ 0.05
SCN5A-213ENST00000491944 Q6ZN92 141 aa15.39■□□□□ 0.05
SCN5A-213ENST00000491944 CHCHD1Q96BP2 118 aaKnown RBP15.39■□□□□ 0.05
SCN5A-213ENST00000491944 LINC01549A6NIU2 74 aa15.38■□□□□ 0.05
SCN5A-213ENST00000491944 IFITM10A6NMD0 228 aa15.38■□□□□ 0.05
SCN5A-213ENST00000491944 CCL25O15444 150 aa15.38■□□□□ 0.05
SCN5A-213ENST00000491944 XCL1P47992 114 aa15.38■□□□□ 0.05
SCN5A-213ENST00000491944 TIMM17AQ99595 171 aa15.38■□□□□ 0.05
SCN5A-213ENST00000491944 A0A1B0GVY2 172 aa15.37■□□□□ 0.05
SCN5A-213ENST00000491944 HBDP02042 147 aa15.37■□□□□ 0.05
SCN5A-213ENST00000491944 WFDC2Q14508 124 aa15.37■□□□□ 0.05
SCN5A-213ENST00000491944 TEX43Q6ZNM6 134 aa15.37■□□□□ 0.05
SCN5A-213ENST00000491944 ERASQ7Z444 233 aa15.37■□□□□ 0.05
SCN5A-213ENST00000491944 C1orf196B1AJZ1 125 aa15.36■□□□□ 0.05
SCN5A-213ENST00000491944 NPSP0C0P6 89 aa15.36■□□□□ 0.05
SCN5A-213ENST00000491944 DNAH17Q9UFH2 4485 aa15.36■□□□□ 0.05
SCN5A-213ENST00000491944 A0A096LNJ9 63 aa15.36■□□□□ 0.05
SCN5A-213ENST00000491944 PAPPA-AS1Q5QFB9 102 aa15.36■□□□□ 0.05
SCN5A-213ENST00000491944 VCX2Q9H322 139 aa15.36■□□□□ 0.05
SCN5A-213ENST00000491944 ZC2HC1BQ5TFG8 222 aa15.35■□□□□ 0.05
SCN5A-213ENST00000491944 C2orf88Q9BSF0 95 aa15.35■□□□□ 0.05
SCN5A-213ENST00000491944 HSBP1O75506 76 aa15.34■□□□□ 0.05
SCN5A-213ENST00000491944 SERF1AO75920 110 aa15.34■□□□□ 0.05
SCN5A-213ENST00000491944 USP17L23D6RBM5 183 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BKO60814 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BJP06899 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BOP23527 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BBP33778 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BDP58876 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BCP62807 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 FOXI1Q12951 378 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST2H2BEQ16778 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.33■□□□□ 0.04
SCN5A-213ENST00000491944 LINC00173Q6ZV60 143 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 SPATA12Q7Z6I5 190 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BHQ93079 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 AMELXQ99217 191 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BNQ99877 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 HIST1H2BMQ99879 126 aa15.33■□□□□ 0.04
SCN5A-213ENST00000491944 CD164L2Q6UWJ8 174 aa15.32■□□□□ 0.04
SCN5A-213ENST00000491944 Q8N814 137 aa15.32■□□□□ 0.04
SCN5A-213ENST00000491944 FAT2Q9NYQ8 4349 aa15.31■□□□□ 0.04
SCN5A-213ENST00000491944 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.31■□□□□ 0.04
SCN5A-213ENST00000491944 LINC00310P59036 64 aa15.3■□□□□ 0.04
SCN5A-213ENST00000491944 KRTAP10-2P60368 255 aa15.3■□□□□ 0.04
SCN5A-213ENST00000491944 PDZD11Q5EBL8 140 aa15.3■□□□□ 0.04
SCN5A-213ENST00000491944 FUSP35637 526 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCN5A-213ENST00000491944 C14orf177Q52M58 125 aa15.29■□□□□ 0.04
SCN5A-213ENST00000491944 FAM19A2Q8N3H0 131 aa15.29■□□□□ 0.04
SCN5A-213ENST00000491944 UBE2D1P51668 147 aa15.28■□□□□ 0.04
SCN5A-213ENST00000491944 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.27■□□□□ 0.04
SCN5A-213ENST00000491944 ATP5LO75964 103 aa15.27■□□□□ 0.04
SCN5A-213ENST00000491944 COX7A2LO14548 114 aa15.26■□□□□ 0.03
SCN5A-213ENST00000491944 NUPR1O60356 82 aa15.26■□□□□ 0.03
SCN5A-213ENST00000491944 LINC00242Q5T6M2 205 aa15.26■□□□□ 0.03
SCN5A-213ENST00000491944 CFAP161Q6P656 301 aa15.26■□□□□ 0.03
SCN5A-213ENST00000491944 NDUFA6P56556 154 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms