RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 IGHV3-21A0A0B4J1V1 117 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 A0A0B4J2C4 111 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 H3BVH4 76 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 SLC25A20O43772 301 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 IGLV1-47P01700 117 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 COX6B1P14854 86 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 SNRPD3P62318 126 aaKnown RBP3.28□□□□□ -1.88
RTN4-215ENST00000491592 ZFP2Q6ZN57 461 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 C7orf65Q6ZTY9 151 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 RNASE6Q93091 150 aaKnown RBP3.28□□□□□ -1.88
RTN4-215ENST00000491592 TMEM141Q96I45 108 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 B9D2Q9BPU9 175 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 C16orf95Q9H693 158 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 C8orf17Q9NRJ1 99 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 CENPFP49454 3210 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 ARFGEF3Q5TH69 2177 aa3.28□□□□□ -1.88
RTN4-215ENST00000491592 ABCA1O95477 2261 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 HTTP42858 3142 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 IGLV11-55A0A075B6I3 123 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 A0A0J9YX75 114 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 A0A0J9YY99 117 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 TRBV10-2A0A0K0K1G8 114 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 C11orf86A6NJI1 115 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 M0R2P5 195 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 IGHV3-30P01768 117 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 IGHV3-30-5P0DP03 117 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 RNASE4P34096 147 aaKnown RBP3.27□□□□□ -1.89
RTN4-215ENST00000491592 DEFB121Q5J5C9 76 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 SPANXN1Q5VSR9 72 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 CELA1Q9UNI1 258 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 CADP27708 2225 aa3.27□□□□□ -1.89
RTN4-215ENST00000491592 SVILO95425 2214 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 TRAV2A0A0B4J234 112 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 IGKV3D-20A0A0C4DH25 116 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 TRBV30A0A0K0K1B3 111 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 BPY2O14599 106 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 LEPROTO15243 131 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 IGHV3-33P01772 117 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 ACYP1P07311 99 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 COX6CP09669 75 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 EFNA4P52798 201 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 MRPS36P82909 103 aaKnown RBP3.26□□□□□ -1.89
RTN4-215ENST00000491592 EBI3Q14213 229 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 KLK9Q2XQG4 91 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 TMEM170BQ5T4T1 132 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 DYNAPQ8N1N2 210 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 POM121L12Q8N7R1 296 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 C15orf53Q8NAA6 179 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 Q8TAT8 98 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 DIRC1Q969H9 104 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 DPH3P1Q9H4G8 78 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 KLK9Q9UKQ9 250 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 PHLDA3Q9Y5J5 127 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 SMAD5-AS1Q9Y6J3 95 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 AHCTF1Q8WYP5 2266 aa3.26□□□□□ -1.89
RTN4-215ENST00000491592 ICE1Q9Y2F5 2266 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 TRBV7-7A0A0K0K1E9 115 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 SDHAF1A6NFY7 115 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 OOSP1A8MZH6 123 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 H3BMM0 161 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 TRGV3P03979 118 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 APELAP0DMC3 54 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 TSPEAR-AS2P59090 65 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 CCL8P80075 99 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 RNASE13Q5GAN3 156 aaKnown RBP3.25□□□□□ -1.89
RTN4-215ENST00000491592 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 TMEM105Q8N8V8 129 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 TMEM263Q8WUH6 116 aaKnown RBP3.25□□□□□ -1.89
RTN4-215ENST00000491592 UBE2WQ96B02 151 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 ODF3Q96PU9 254 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 LINC00588Q9Y4M8 146 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 ZGRF1Q86YA3 2104 aa3.25□□□□□ -1.89
RTN4-215ENST00000491592 PLCE1Q9P212 2302 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 IGLV4-69A0A075B6H9 119 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 TRAV21A0A0B4J279 112 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 IGIPA6NJ69 53 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 IGHV1-69P01742 117 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 CTSGP08311 255 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 NPC2P61916 151 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 RHOHQ15669 191 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 C2orf82Q6UX34 121 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 C20orf203Q8NBC4 194 aa3.24□□□□□ -1.89
RTN4-215ENST00000491592 ITLN2Q8WWU7 325 aaPredicted RBP3.24□□□□□ -1.89
RTN4-215ENST00000491592 A0A1W2PNU3 283 aaPredicted RBP3.23□□□□□ -1.89
RTN4-215ENST00000491592 A0A1W2PPR1 153 aa3.23□□□□□ -1.89
RTN4-215ENST00000491592 M0R1W7 72 aa3.23□□□□□ -1.89
RTN4-215ENST00000491592 IGHV3-30-3P0DP02 117 aa3.23□□□□□ -1.89
RTN4-215ENST00000491592 POLR2KP53803 58 aaKnown RBP3.23□□□□□ -1.89
RTN4-215ENST00000491592 Q1RN00 199 aa3.23□□□□□ -1.89
RTN4-215ENST00000491592 ZFAND2AQ8N6M9 145 aa3.23□□□□□ -1.89
RTN4-215ENST00000491592 KLHL30-AS1Q8NEE0 82 aa3.23□□□□□ -1.89
RTN4-215ENST00000491592 DYNLRB1Q9NP97 96 aa3.23□□□□□ -1.89
RTN4-215ENST00000491592 URB1O60287 2271 aaKnown RBP3.22□□□□□ -1.89
RTN4-215ENST00000491592 TRBV7-1A0A0A6YYK4 115 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 TRBV6-5A0A0K0K1A5 114 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 TMEM223A0PJW6 202 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 C3orf84H3BNL1 204 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms