RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
NUP188-208ENST00000491502 VSIG2Q96IQ7 327 aa9.39□□□□□ -0.91
NUP188-208ENST00000491502 RYR2Q92736 4967 aa9.39□□□□□ -0.91
NUP188-208ENST00000491502 ZNF25P17030 456 aaPredicted RBP9.38□□□□□ -0.91
NUP188-208ENST00000491502 PMVKQ15126 192 aa9.38□□□□□ -0.91
NUP188-208ENST00000491502 VCX2Q9H322 139 aa9.38□□□□□ -0.91
NUP188-208ENST00000491502 CSDC2Q9Y534 153 aaKnown RBP9.38□□□□□ -0.91
NUP188-208ENST00000491502 A0A087WX48 190 aa9.37□□□□□ -0.91
NUP188-208ENST00000491502 PLNP26678 52 aa9.37□□□□□ -0.91
NUP188-208ENST00000491502 TIRAPP58753 221 aa9.37□□□□□ -0.91
NUP188-208ENST00000491502 MRPL52Q86TS9 123 aaKnown RBP9.37□□□□□ -0.91
NUP188-208ENST00000491502 DEFB104AQ8WTQ1 72 aa9.37□□□□□ -0.91
NUP188-208ENST00000491502 C2orf88Q9BSF0 95 aa9.37□□□□□ -0.91
NUP188-208ENST00000491502 VAMP8Q9BV40 100 aa9.37□□□□□ -0.91
NUP188-208ENST00000491502 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
NUP188-208ENST00000491502 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
NUP188-208ENST00000491502 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
NUP188-208ENST00000491502 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
NUP188-208ENST00000491502 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
NUP188-208ENST00000491502 C15orf53Q8NAA6 179 aa9.36□□□□□ -0.91
NUP188-208ENST00000491502 OR5A1Q8NGJ0 315 aa9.36□□□□□ -0.91
NUP188-208ENST00000491502 BAALCQ8WXS3 180 aa9.36□□□□□ -0.91
NUP188-208ENST00000491502 CHCHD5Q9BSY4 110 aa9.36□□□□□ -0.91
NUP188-208ENST00000491502 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
NUP188-208ENST00000491502 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
NUP188-208ENST00000491502 DNAH1Q9P2D7 4330 aa9.36□□□□□ -0.91
NUP188-208ENST00000491502 F8VRH5 84 aa9.35□□□□□ -0.91
NUP188-208ENST00000491502 DPM2O94777 84 aa9.35□□□□□ -0.91
NUP188-208ENST00000491502 FGF6P10767 208 aa9.35□□□□□ -0.91
NUP188-208ENST00000491502 NTM-AS1Q6ZSK4 140 aa9.35□□□□□ -0.91
NUP188-208ENST00000491502 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
NUP188-208ENST00000491502 PRSS29PA6NIE9 313 aa9.34□□□□□ -0.91
NUP188-208ENST00000491502 IGKCP01834 107 aa9.34□□□□□ -0.91
NUP188-208ENST00000491502 ODF1Q14990 250 aa9.34□□□□□ -0.91
NUP188-208ENST00000491502 Q8N976 141 aa9.34□□□□□ -0.91
NUP188-208ENST00000491502 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
NUP188-208ENST00000491502 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
NUP188-208ENST00000491502 A0A096LPF7 62 aa9.33□□□□□ -0.92
NUP188-208ENST00000491502 TRAV8-6A0A0B4J262 113 aa9.33□□□□□ -0.92
NUP188-208ENST00000491502 SEC11AP67812 179 aa9.33□□□□□ -0.92
NUP188-208ENST00000491502 LELP1Q5T871 98 aa9.33□□□□□ -0.92
NUP188-208ENST00000491502 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
NUP188-208ENST00000491502 AMELXQ99217 191 aa9.32□□□□□ -0.92
NUP188-208ENST00000491502 A0A1B0GUV1 79 aa9.31□□□□□ -0.92
NUP188-208ENST00000491502 TSTD3H0UI37 97 aa9.31□□□□□ -0.92
NUP188-208ENST00000491502 GAGE6Q13070 117 aa9.31□□□□□ -0.92
NUP188-208ENST00000491502 ZNF664Q8N3J9 261 aa9.31□□□□□ -0.92
NUP188-208ENST00000491502 MRPL35Q9NZE8 188 aaKnown RBP9.31□□□□□ -0.92
NUP188-208ENST00000491502 HERVK_113P61574 105 aa9.3□□□□□ -0.92
NUP188-208ENST00000491502 PMCHL2Q9BQD1 86 aa9.3□□□□□ -0.92
NUP188-208ENST00000491502 SPATA45Q537H7 98 aa9.29□□□□□ -0.92
NUP188-208ENST00000491502 LYPD5Q6UWN5 251 aa9.29□□□□□ -0.92
NUP188-208ENST00000491502 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
NUP188-208ENST00000491502 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
NUP188-208ENST00000491502 PAM16Q9Y3D7 125 aa9.29□□□□□ -0.92
NUP188-208ENST00000491502 CCL25O15444 150 aa9.28□□□□□ -0.92
NUP188-208ENST00000491502 OPRPNQ99935 248 aaPredicted RBP9.28□□□□□ -0.92
NUP188-208ENST00000491502 HYDINQ4G0P3 5121 aa9.27□□□□□ -0.93
NUP188-208ENST00000491502 IGLC3P0DOY3 106 aa9.27□□□□□ -0.93
NUP188-208ENST00000491502 Q6ZUT4 128 aa9.27□□□□□ -0.93
NUP188-208ENST00000491502 NFE4Q86UQ8 179 aa9.27□□□□□ -0.93
NUP188-208ENST00000491502 GEMIN7Q9H840 131 aaKnown RBP9.27□□□□□ -0.93
NUP188-208ENST00000491502 TINCRA0A1B0GVN0 87 aa9.26□□□□□ -0.93
NUP188-208ENST00000491502 H3BRM9 83 aa9.26□□□□□ -0.93
NUP188-208ENST00000491502 RBX1P62877 108 aa9.26□□□□□ -0.93
NUP188-208ENST00000491502 HERVK_113P63121 156 aa9.26□□□□□ -0.93
NUP188-208ENST00000491502 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
NUP188-208ENST00000491502 CDPF1Q6NVV7 123 aa9.26□□□□□ -0.93
NUP188-208ENST00000491502 UBE2DNLQ8IWF7 75 aa9.26□□□□□ -0.93
NUP188-208ENST00000491502 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
NUP188-208ENST00000491502 CCL18P55774 89 aa9.25□□□□□ -0.93
NUP188-208ENST00000491502 CHAC1Q9BUX1 264 aa9.25□□□□□ -0.93
NUP188-208ENST00000491502 IGLV4-69A0A075B6H9 119 aa9.24□□□□□ -0.93
NUP188-208ENST00000491502 hDV102S1A0JD36 115 aa9.24□□□□□ -0.93
NUP188-208ENST00000491502 UBE2D1P51668 147 aa9.24□□□□□ -0.93
NUP188-208ENST00000491502 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
NUP188-208ENST00000491502 FAM19A3Q7Z5A8 133 aa9.24□□□□□ -0.93
NUP188-208ENST00000491502 KMT2AQ03164 3969 aa9.23□□□□□ -0.93
NUP188-208ENST00000491502 A0A0J9YXV3 536 aa9.23□□□□□ -0.93
NUP188-208ENST00000491502 SS18Q15532 418 aa9.23□□□□□ -0.93
NUP188-208ENST00000491502 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
NUP188-208ENST00000491502 FAM104AQ969W3 186 aa9.23□□□□□ -0.93
NUP188-208ENST00000491502 UQCR10Q9UDW1 63 aa9.23□□□□□ -0.93
NUP188-208ENST00000491502 VPS13DQ5THJ4 4388 aa9.22□□□□□ -0.93
NUP188-208ENST00000491502 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
NUP188-208ENST00000491502 ANGP03950 147 aaKnown RBP9.22□□□□□ -0.93
NUP188-208ENST00000491502 ESRGQ1W209 222 aa9.22□□□□□ -0.93
NUP188-208ENST00000491502 MPV17L2Q567V2 206 aa9.22□□□□□ -0.93
NUP188-208ENST00000491502 STPG4Q8N801 248 aa9.22□□□□□ -0.93
NUP188-208ENST00000491502 IGLV4-60A0A075B6I1 120 aa9.21□□□□□ -0.94
NUP188-208ENST00000491502 MAJINQ3KP22 176 aa9.21□□□□□ -0.94
NUP188-208ENST00000491502 SLC25A34Q6PIV7 304 aa9.21□□□□□ -0.94
NUP188-208ENST00000491502 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
NUP188-208ENST00000491502 MIEN1Q9BRT3 115 aa9.21□□□□□ -0.94
NUP188-208ENST00000491502 PRO1933Q9H354 126 aa9.21□□□□□ -0.94
NUP188-208ENST00000491502 E9PLD3 99 aa9.2□□□□□ -0.94
NUP188-208ENST00000491502 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
NUP188-208ENST00000491502 NMUP48645 174 aa9.2□□□□□ -0.94
NUP188-208ENST00000491502 MRPS16Q9Y3D3 137 aaKnown RBP9.2□□□□□ -0.94
NUP188-208ENST00000491502 CRPP02741 224 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms