RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
PTPRC-212ENST00000491302 SULT1C4O75897 302 aa1.86□□□□□ -2.11
PTPRC-212ENST00000491302 CD14P08571 375 aa1.86□□□□□ -2.11
PTPRC-212ENST00000491302 DNAJB13P59910 316 aa1.86□□□□□ -2.11
PTPRC-212ENST00000491302 AKAP14Q86UN6 197 aa1.86□□□□□ -2.11
PTPRC-212ENST00000491302 KNL1Q8NG31 2342 aa1.86□□□□□ -2.11
PTPRC-212ENST00000491302 FAT4Q6V0I7 4981 aa1.86□□□□□ -2.11
PTPRC-212ENST00000491302 BBIP1A8MTZ0 92 aa1.85□□□□□ -2.11
PTPRC-212ENST00000491302 M0QZK8 103 aa1.85□□□□□ -2.11
PTPRC-212ENST00000491302 PDE6GP18545 87 aa1.85□□□□□ -2.11
PTPRC-212ENST00000491302 ETV6P41212 452 aa1.85□□□□□ -2.11
PTPRC-212ENST00000491302 PRB3Q04118 309 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-212ENST00000491302 LIMD2Q9BT23 127 aa1.85□□□□□ -2.11
PTPRC-212ENST00000491302 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
PTPRC-212ENST00000491302 FRAS1Q86XX4 4008 aa1.85□□□□□ -2.11
PTPRC-212ENST00000491302 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.11
PTPRC-212ENST00000491302 CMYA5Q8N3K9 4069 aa1.84□□□□□ -2.11
PTPRC-212ENST00000491302 OR8I2Q8N0Y5 310 aa1.84□□□□□ -2.11
PTPRC-212ENST00000491302 C5orf17Q8NAS9 161 aa1.84□□□□□ -2.11
PTPRC-212ENST00000491302 TCEAL4Q96EI5 215 aa1.84□□□□□ -2.11
PTPRC-212ENST00000491302 ROCK2O75116 1388 aaKnown RBP1.84□□□□□ -2.12
PTPRC-212ENST00000491302 CITO14578 2027 aa1.83□□□□□ -2.12
PTPRC-212ENST00000491302 HBDP02042 147 aa1.83□□□□□ -2.12
PTPRC-212ENST00000491302 SLC25A4P12235 298 aa1.83□□□□□ -2.12
PTPRC-212ENST00000491302 BLCAPP62952 87 aa1.83□□□□□ -2.12
PTPRC-212ENST00000491302 TCTEX1D1Q8N7M0 179 aa1.83□□□□□ -2.12
PTPRC-212ENST00000491302 ANK1P16157 1881 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 A0A1B0GX51 115 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 IFITM5A6NNB3 132 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 UQCRQO14949 82 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 DPM2O94777 84 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 CCL4P13236 92 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 PYDC1Q8WXC3 89 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 LYSTQ99698 3801 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 LPAR5Q9H1C0 372 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 USF3Q68DE3 2245 aa1.82□□□□□ -2.12
PTPRC-212ENST00000491302 MYO7BQ6PIF6 2116 aa1.81□□□□□ -2.12
PTPRC-212ENST00000491302 TRAV36DV7A0A075B6V5 113 aa1.81□□□□□ -2.12
PTPRC-212ENST00000491302 LOC107984156A0A0G2JMH3 177 aa1.81□□□□□ -2.12
PTPRC-212ENST00000491302 IGHV3-30P01768 117 aa1.81□□□□□ -2.12
PTPRC-212ENST00000491302 IGHV3-30-5P0DP03 117 aa1.81□□□□□ -2.12
PTPRC-212ENST00000491302 FXYD4P59646 89 aa1.81□□□□□ -2.12
PTPRC-212ENST00000491302 ARL17AQ8IVW1 177 aa1.81□□□□□ -2.12
PTPRC-212ENST00000491302 C19orf12Q9NSK7 152 aa1.81□□□□□ -2.12
PTPRC-212ENST00000491302 ABCA1O95477 2261 aa1.8□□□□□ -2.12
PTPRC-212ENST00000491302 A6NN06 94 aa1.8□□□□□ -2.12
PTPRC-212ENST00000491302 DEGS1O15121 323 aa1.8□□□□□ -2.12
PTPRC-212ENST00000491302 PSPHP78330 225 aa1.8□□□□□ -2.12
PTPRC-212ENST00000491302 C3orf62Q6ZUJ4 267 aa1.8□□□□□ -2.12
PTPRC-212ENST00000491302 C10orf111Q8N326 155 aa1.8□□□□□ -2.12
PTPRC-212ENST00000491302 DSPPQ9NZW4 1301 aa1.8□□□□□ -2.12
PTPRC-212ENST00000491302 A0A1W2PPB8 328 aa1.79□□□□□ -2.12
PTPRC-212ENST00000491302 A0A1W2PRS3 328 aa1.79□□□□□ -2.12
PTPRC-212ENST00000491302 KIR3DP1A8MWS1 328 aa1.79□□□□□ -2.12
PTPRC-212ENST00000491302 EDF1O60869 148 aaKnown RBP1.79□□□□□ -2.12
PTPRC-212ENST00000491302 GTF2A1P52655 376 aaPredicted RBP1.79□□□□□ -2.12
PTPRC-212ENST00000491302 RPL37AP61513 92 aaKnown RBP1.79□□□□□ -2.12
PTPRC-212ENST00000491302 OR8B8Q15620 311 aa1.79□□□□□ -2.12
PTPRC-212ENST00000491302 ASB16-AS1Q495Z4 193 aa1.79□□□□□ -2.12
PTPRC-212ENST00000491302 Q6ZQY7 126 aa1.79□□□□□ -2.12
PTPRC-212ENST00000491302 AIF1LQ9BQI0 150 aa1.79□□□□□ -2.12
PTPRC-212ENST00000491302 STAB2Q8WWQ8 2551 aa1.79□□□□□ -2.12
PTPRC-212ENST00000491302 ZNF727A8MUV8 499 aa1.78□□□□□ -2.12
PTPRC-212ENST00000491302 SMIM7Q9BQ49 75 aa1.78□□□□□ -2.12
PTPRC-212ENST00000491302 CACNA1CQ13936 2221 aa1.78□□□□□ -2.13
PTPRC-212ENST00000491302 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
PTPRC-212ENST00000491302 GYPBP06028 91 aa1.77□□□□□ -2.13
PTPRC-212ENST00000491302 MYH1P12882 1939 aa1.77□□□□□ -2.13
PTPRC-212ENST00000491302 DMBT1Q9UGM3 2413 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-212ENST00000491302 TRBV30A0A0K0K1B3 111 aa1.76□□□□□ -2.13
PTPRC-212ENST00000491302 PNMA8CA0A1B0GUJ8 204 aa1.76□□□□□ -2.13
PTPRC-212ENST00000491302 CKS2P33552 79 aa1.76□□□□□ -2.13
PTPRC-212ENST00000491302 OR8J3Q8NGG0 315 aa1.76□□□□□ -2.13
PTPRC-212ENST00000491302 SPTBP11277 2137 aa1.76□□□□□ -2.13
PTPRC-212ENST00000491302 PLXNA2O75051 1894 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 KMT2AQ03164 3969 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 CCDC171Q6TFL3 1326 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 NINQ8N4C6 2090 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 BORCS7-ASMTA0A0B4J1R7 106 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 SCGB1A1P11684 91 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 CCDC153Q494R4 210 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 HSD17B12Q53GQ0 312 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 CALML5Q9NZT1 146 aa1.75□□□□□ -2.13
PTPRC-212ENST00000491302 SLC25A5P05141 298 aaKnown RBP1.74□□□□□ -2.13
PTPRC-212ENST00000491302 PAEPP09466 180 aa1.74□□□□□ -2.13
PTPRC-212ENST00000491302 SCTP09683 121 aa1.74□□□□□ -2.13
PTPRC-212ENST00000491302 SDC4P31431 198 aa1.74□□□□□ -2.13
PTPRC-212ENST00000491302 SNRPD3P62318 126 aaKnown RBP1.74□□□□□ -2.13
PTPRC-212ENST00000491302 C6orf52Q5T4I8 152 aa1.74□□□□□ -2.13
PTPRC-212ENST00000491302 CADP27708 2225 aa1.74□□□□□ -2.13
PTPRC-212ENST00000491302 MYH8P13535 1937 aa1.74□□□□□ -2.13
PTPRC-212ENST00000491302 DNAH9Q9NYC9 4486 aa1.73□□□□□ -2.13
PTPRC-212ENST00000491302 TMEM189A5PLL7 270 aa1.73□□□□□ -2.13
PTPRC-212ENST00000491302 TCRAP04437 139 aa1.73□□□□□ -2.13
PTPRC-212ENST00000491302 APODP05090 189 aa1.73□□□□□ -2.13
PTPRC-212ENST00000491302 HIST1H1BP16401 226 aaKnown RBP1.73□□□□□ -2.13
PTPRC-212ENST00000491302 OTOSQ8NHW6 89 aa1.73□□□□□ -2.13
PTPRC-212ENST00000491302 JPT1Q9UK76 154 aa1.73□□□□□ -2.13
PTPRC-212ENST00000491302 U3KQA8 63 aa1.73□□□□□ -2.13
PTPRC-212ENST00000491302 DBIP07108 87 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms