RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 ST20Q9HBF5 79 aa5.78□□□□□ -1.48
CMSS1-206ENST00000491299 A0A087WTM6 91 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 A0A087WX48 190 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 TRAV8-3A0A0A6YYJ7 113 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 C1orf196B1AJZ1 125 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 CDK2AP2O75956 126 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 LINC00694P0DN24 101 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 C18orf32Q8TCD1 76 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 TM2D2Q9BX73 214 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 DNAH11Q96DT5 4516 aa5.77□□□□□ -1.49
CMSS1-206ENST00000491299 TRBV6-5A0A0K0K1A5 114 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 SDHAF1A6NFY7 115 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BKO60814 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BJP06899 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BOP23527 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BBP33778 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BDP58876 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 UBE2D3P61077 147 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 SUMO2P61956 95 aaKnown RBP5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BCP62807 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 UBE2D2P62837 147 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST2H2BEQ16778 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BHQ93079 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 RMI2Q96E14 147 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 DNAJC30Q96LL9 226 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BNQ99877 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 HIST1H2BMQ99879 126 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 TMEM70Q9BUB7 260 aa5.76□□□□□ -1.49
CMSS1-206ENST00000491299 DYNC1H1Q14204 4646 aaKnown RBP5.75□□□□□ -1.49
CMSS1-206ENST00000491299 PPP1R17O96001 155 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 PMCHP20382 165 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 MALP21145 153 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 IFI27P40305 119 aaPredicted RBP5.75□□□□□ -1.49
CMSS1-206ENST00000491299 POLR2KP53803 58 aaKnown RBP5.75□□□□□ -1.49
CMSS1-206ENST00000491299 PKIAP61925 76 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 TMEM97Q5BJF2 176 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 C20orf78Q9BR46 151 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 CHCHD7Q9BUK0 85 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 SMIM2Q9BVW6 85 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 LAMTOR2Q9Y2Q5 125 aa5.75□□□□□ -1.49
CMSS1-206ENST00000491299 TMEM262E9PQX1 116 aa5.74□□□□□ -1.49
CMSS1-206ENST00000491299 VCYO14598 125 aa5.74□□□□□ -1.49
CMSS1-206ENST00000491299 TCAPO15273 167 aa5.74□□□□□ -1.49
CMSS1-206ENST00000491299 RAB5BP61020 215 aa5.74□□□□□ -1.49
CMSS1-206ENST00000491299 DAZ4Q86SG3 579 aaKnown RBP5.74□□□□□ -1.49
CMSS1-206ENST00000491299 BAGE3Q86Y29 109 aa5.74□□□□□ -1.49
CMSS1-206ENST00000491299 MAPKAPK5-AS1Q8N8E1 139 aa5.74□□□□□ -1.49
CMSS1-206ENST00000491299 PRSS3P2Q8NHM4 247 aa5.74□□□□□ -1.49
CMSS1-206ENST00000491299 URB1-AS1Q96HZ7 61 aa5.74□□□□□ -1.49
CMSS1-206ENST00000491299 DAZ3Q9NR90 486 aaKnown RBP5.74□□□□□ -1.49
CMSS1-206ENST00000491299 IGLV5-52A0A0A0MRZ9 124 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 TRBV6-8A0A0A6YYG3 113 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 PRSS47A8MTI9 375 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 I3L3M4 83 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 TSHBP01222 138 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 CRPP02741 224 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 NDUFA6P56556 154 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 RPL32P62910 135 aaKnown RBP5.73□□□□□ -1.49
CMSS1-206ENST00000491299 Q0VG73 95 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 RNASEKQ6P5S7 137 aaKnown RBP5.73□□□□□ -1.49
CMSS1-206ENST00000491299 NTM-AS1Q6ZSK4 140 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 FA2HQ7L5A8 372 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 NIT1Q86X76 327 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 Q8N8P6 123 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 CHCHD5Q9BSY4 110 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 KLK12Q9UKR0 248 aa5.73□□□□□ -1.49
CMSS1-206ENST00000491299 TRBV25-1A0A075B6N4 114 aa5.72□□□□□ -1.49
CMSS1-206ENST00000491299 IGKV2D-24A0A075B6R9 120 aa5.72□□□□□ -1.49
CMSS1-206ENST00000491299 TRBV27A0A0K0K1C4 114 aa5.72□□□□□ -1.49
CMSS1-206ENST00000491299 NUPR1O60356 82 aa5.72□□□□□ -1.49
CMSS1-206ENST00000491299 SERF1AO75920 110 aa5.72□□□□□ -1.49
CMSS1-206ENST00000491299 COTL1Q14019 142 aa5.72□□□□□ -1.49
CMSS1-206ENST00000491299 Q8N814 137 aa5.72□□□□□ -1.49
CMSS1-206ENST00000491299 C1orf43Q9BWL3 253 aa5.72□□□□□ -1.49
CMSS1-206ENST00000491299 NXT2Q9NPJ8 142 aaKnown RBP5.72□□□□□ -1.49
CMSS1-206ENST00000491299 ANGP03950 147 aaKnown RBP5.71□□□□□ -1.5
CMSS1-206ENST00000491299 LINC00614P0C842 121 aa5.71□□□□□ -1.5
CMSS1-206ENST00000491299 FCER1GP30273 86 aa5.71□□□□□ -1.5
CMSS1-206ENST00000491299 FUSP35637 526 aaKnown RBP eCLIP5.71□□□□□ -1.5
CMSS1-206ENST00000491299 PMCHL1Q16048 86 aa5.71□□□□□ -1.5
CMSS1-206ENST00000491299 UBE2WQ96B02 151 aa5.71□□□□□ -1.5
CMSS1-206ENST00000491299 KIR2DL4Q99706 377 aa5.71□□□□□ -1.5
CMSS1-206ENST00000491299 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.5
CMSS1-206ENST00000491299 LRCOL1A6NCL2 159 aa5.7□□□□□ -1.5
CMSS1-206ENST00000491299 AMTP48728 403 aa5.7□□□□□ -1.5
CMSS1-206ENST00000491299 FAM19A2Q8N3H0 131 aa5.7□□□□□ -1.5
CMSS1-206ENST00000491299 LRP1BQ9NZR2 4599 aa5.7□□□□□ -1.5
CMSS1-206ENST00000491299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.69□□□□□ -1.5
CMSS1-206ENST00000491299 IGHV1-24A0A0C4DH33 117 aa5.69□□□□□ -1.5
CMSS1-206ENST00000491299 IGKV2-29A2NJV5 120 aaPredicted RBP5.69□□□□□ -1.5
CMSS1-206ENST00000491299 LINC01546A6NGU7 62 aa5.69□□□□□ -1.5
CMSS1-206ENST00000491299 UBE2L6O14933 153 aa5.69□□□□□ -1.5
CMSS1-206ENST00000491299 HSBP1O75506 76 aa5.69□□□□□ -1.5
CMSS1-206ENST00000491299 ESDP10768 282 aa5.69□□□□□ -1.5
CMSS1-206ENST00000491299 RPL39P62891 51 aaKnown RBP5.69□□□□□ -1.5
CMSS1-206ENST00000491299 GAGE6Q13070 117 aa5.69□□□□□ -1.5
CMSS1-206ENST00000491299 MPV17L2Q567V2 206 aa5.69□□□□□ -1.5
CMSS1-206ENST00000491299 PDZD11Q5EBL8 140 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms