RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PRO0255Q9UI72 69 aa9.74□□□□□ -0.85
SMPD4-219ENST00000491128 CHTOPQ9Y3Y2 248 aaKnown RBP9.74□□□□□ -0.85
SMPD4-219ENST00000491128 ATP5G1P05496 136 aa9.73□□□□□ -0.85
SMPD4-219ENST00000491128 STAB2Q8WWQ8 2551 aa9.73□□□□□ -0.85
SMPD4-219ENST00000491128 IGLV4-3A0A075B6K6 122 aa9.73□□□□□ -0.85
SMPD4-219ENST00000491128 DAZ4Q86SG3 579 aaKnown RBP9.73□□□□□ -0.85
SMPD4-219ENST00000491128 DAZ3Q9NR90 486 aaKnown RBP9.73□□□□□ -0.85
SMPD4-219ENST00000491128 IGKCP01834 107 aa9.72□□□□□ -0.85
SMPD4-219ENST00000491128 CST9LQ9H4G1 147 aa9.72□□□□□ -0.85
SMPD4-219ENST00000491128 UBE2D4Q9Y2X8 147 aa9.72□□□□□ -0.85
SMPD4-219ENST00000491128 Q6ZUT4 128 aa9.72□□□□□ -0.85
SMPD4-219ENST00000491128 GAGE6Q13070 117 aa9.71□□□□□ -0.85
SMPD4-219ENST00000491128 TIMM17AQ99595 171 aa9.71□□□□□ -0.85
SMPD4-219ENST00000491128 MEGF8Q7Z7M0 2845 aa9.71□□□□□ -0.85
SMPD4-219ENST00000491128 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.86
SMPD4-219ENST00000491128 HSBP1L1C9JCN9 74 aa9.71□□□□□ -0.86
SMPD4-219ENST00000491128 DPM2O94777 84 aa9.71□□□□□ -0.86
SMPD4-219ENST00000491128 KPRPQ5T749 579 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-219ENST00000491128 NMUP48645 174 aa9.7□□□□□ -0.86
SMPD4-219ENST00000491128 PMVKQ15126 192 aa9.7□□□□□ -0.86
SMPD4-219ENST00000491128 ATP6V0E2Q8NHE4 81 aa9.7□□□□□ -0.86
SMPD4-219ENST00000491128 F8VRH5 84 aa9.7□□□□□ -0.86
SMPD4-219ENST00000491128 TAX1BP3O14907 124 aa9.7□□□□□ -0.86
SMPD4-219ENST00000491128 VAMP3Q15836 100 aa9.7□□□□□ -0.86
SMPD4-219ENST00000491128 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
SMPD4-219ENST00000491128 VCX2Q9H322 139 aa9.7□□□□□ -0.86
SMPD4-219ENST00000491128 PRKDCP78527 4128 aaKnown RBP9.7□□□□□ -0.86
SMPD4-219ENST00000491128 IGLV4-69A0A075B6H9 119 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 IGKV3OR2-268A0A0C4DH90 116 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 C11orf86A6NJI1 115 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 FGF6P10767 208 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 DGAT2L7PQ6IED9 249 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 DNAH9Q9NYC9 4486 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 A0A0J9YXV3 536 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 CIDEAO60543 219 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 Q8N3U1 123 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 TRAV12-1A0A0B4J245 112 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 MPV17L2Q567V2 206 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 PCP2Q8IVA1 136 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 VPS25Q9BRG1 176 aa9.69□□□□□ -0.86
SMPD4-219ENST00000491128 IGHV3-64A0A075B6Q5 118 aa9.68□□□□□ -0.86
SMPD4-219ENST00000491128 TRBV6-8A0A0A6YYG3 113 aa9.68□□□□□ -0.86
SMPD4-219ENST00000491128 TRBV25-1A0A075B6N4 114 aa9.68□□□□□ -0.86
SMPD4-219ENST00000491128 UBE2L6O14933 153 aa9.68□□□□□ -0.86
SMPD4-219ENST00000491128 C11orf45Q8TAV5 145 aa9.68□□□□□ -0.86
SMPD4-219ENST00000491128 TM2D3Q9BRN9 247 aa9.68□□□□□ -0.86
SMPD4-219ENST00000491128 TMEM243Q9BU79 118 aa9.68□□□□□ -0.86
SMPD4-219ENST00000491128 OCIAD2Q56VL3 154 aa9.67□□□□□ -0.86
SMPD4-219ENST00000491128 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
SMPD4-219ENST00000491128 SPATA25Q9BR10 227 aa9.67□□□□□ -0.86
SMPD4-219ENST00000491128 IGLV4-60A0A075B6I1 120 aa9.67□□□□□ -0.86
SMPD4-219ENST00000491128 TMEM262E9PQX1 116 aa9.67□□□□□ -0.86
SMPD4-219ENST00000491128 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
SMPD4-219ENST00000491128 LYSTQ99698 3801 aa9.66□□□□□ -0.86
SMPD4-219ENST00000491128 BVES-AS1Q5T3Y7 98 aa9.66□□□□□ -0.86
SMPD4-219ENST00000491128 TRAV13-1A0A0B4J241 112 aa9.66□□□□□ -0.86
SMPD4-219ENST00000491128 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
SMPD4-219ENST00000491128 TRAV8-6A0A0B4J262 113 aa9.65□□□□□ -0.86
SMPD4-219ENST00000491128 PLNP26678 52 aa9.65□□□□□ -0.86
SMPD4-219ENST00000491128 CHAC1Q9BUX1 264 aa9.65□□□□□ -0.86
SMPD4-219ENST00000491128 GTSF1LQ9H1H1 148 aa9.65□□□□□ -0.86
SMPD4-219ENST00000491128 CLPSL2Q6UWE3 100 aa9.65□□□□□ -0.87
SMPD4-219ENST00000491128 C11orf68Q9H3H3 251 aaKnown RBP9.65□□□□□ -0.87
SMPD4-219ENST00000491128 SPANXA1Q9NS26 97 aa9.65□□□□□ -0.87
SMPD4-219ENST00000491128 AMELXQ99217 191 aa9.64□□□□□ -0.87
SMPD4-219ENST00000491128 DEFB131BA0A096LNP1 70 aa9.63□□□□□ -0.87
SMPD4-219ENST00000491128 OR5A1Q8NGJ0 315 aa9.63□□□□□ -0.87
SMPD4-219ENST00000491128 LINC01549A6NIU2 74 aa9.63□□□□□ -0.87
SMPD4-219ENST00000491128 COX6A2Q02221 97 aa9.63□□□□□ -0.87
SMPD4-219ENST00000491128 MAPKAPK5-AS1Q8N8E1 139 aa9.63□□□□□ -0.87
SMPD4-219ENST00000491128 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
SMPD4-219ENST00000491128 SLC25A34Q6PIV7 304 aa9.62□□□□□ -0.87
SMPD4-219ENST00000491128 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
SMPD4-219ENST00000491128 COX8AP10176 69 aa9.61□□□□□ -0.87
SMPD4-219ENST00000491128 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
SMPD4-219ENST00000491128 ICOSQ9Y6W8 199 aa9.61□□□□□ -0.87
SMPD4-219ENST00000491128 TRAV8-3A0A0A6YYJ7 113 aa9.6□□□□□ -0.87
SMPD4-219ENST00000491128 TEX48A0A1B0GUV7 120 aa9.6□□□□□ -0.87
SMPD4-219ENST00000491128 ZNF22P17026 224 aaPredicted RBP9.6□□□□□ -0.87
SMPD4-219ENST00000491128 TMEM101Q96IK0 257 aa9.6□□□□□ -0.87
SMPD4-219ENST00000491128 PAPPA-AS1Q5QFB9 102 aa9.6□□□□□ -0.87
SMPD4-219ENST00000491128 CSMD3Q7Z407 3707 aa9.59□□□□□ -0.87
SMPD4-219ENST00000491128 K7ERU9 68 aa9.59□□□□□ -0.87
SMPD4-219ENST00000491128 UBE2D1P51668 147 aa9.59□□□□□ -0.87
SMPD4-219ENST00000491128 TSPEAR-AS2P59090 65 aa9.59□□□□□ -0.87
SMPD4-219ENST00000491128 SPINK8P0C7L1 97 aa9.59□□□□□ -0.87
SMPD4-219ENST00000491128 TENM2Q9NT68 2774 aa9.58□□□□□ -0.88
SMPD4-219ENST00000491128 SVIPQ8NHG7 77 aa9.58□□□□□ -0.88
SMPD4-219ENST00000491128 CDKN2A-AS1Q9UH64 79 aa9.58□□□□□ -0.88
SMPD4-219ENST00000491128 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
SMPD4-219ENST00000491128 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
SMPD4-219ENST00000491128 LYPD5Q6UWN5 251 aa9.58□□□□□ -0.88
SMPD4-219ENST00000491128 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
SMPD4-219ENST00000491128 TIMM21Q9BVV7 248 aa9.58□□□□□ -0.88
SMPD4-219ENST00000491128 NFE4Q86UQ8 179 aa9.57□□□□□ -0.88
SMPD4-219ENST00000491128 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
SMPD4-219ENST00000491128 GEMIN7Q9H840 131 aaKnown RBP9.57□□□□□ -0.88
SMPD4-219ENST00000491128 CSDC2Q9Y534 153 aaKnown RBP9.56□□□□□ -0.88
SMPD4-219ENST00000491128 IGLV10-54A0A075B6I4 117 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms