RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 FER1L6-AS1Q8NA97 138 aa3.99□□□□□ -1.77
PRPF40A-210ENST00000489741 FAM213BQ8TBF2 198 aa3.99□□□□□ -1.77
PRPF40A-210ENST00000489741 TMEM243Q9BU79 118 aa3.99□□□□□ -1.77
PRPF40A-210ENST00000489741 NIT2Q9NQR4 276 aa3.99□□□□□ -1.77
PRPF40A-210ENST00000489741 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
PRPF40A-210ENST00000489741 A0A1B0GV50 99 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 F2Z2F3 143 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 SMLR1H3BR10 107 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 H7C1H1 209 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 PFDN1O60925 122 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 CHTF8P0CG12 524 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 S100A1P23297 94 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 NKX2-5P52952 324 aaPredicted RBP3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 RPS20P60866 119 aaKnown RBP3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 CACNG7P62955 275 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 UBE2V1Q13404 147 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 RASL11AQ6T310 242 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 NOTCH2NLQ7Z3S9 236 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 C9orf62Q8N4C0 152 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 C15orf56Q8N910 161 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 OR2D3Q8NGH3 330 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 SMIM12Q96EX1 92 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 LINC01600Q96MT4 127 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 CNFNQ9BYD5 112 aa3.98□□□□□ -1.77
PRPF40A-210ENST00000489741 TRBV20OR9-2A0A075B6H5 130 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 RAB19A4D1S5 217 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 BCL2L11O43521 198 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 MGPP08493 103 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 NTF3P20783 257 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 RAB5CP51148 216 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 CENPWQ5EE01 88 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 LYZL1Q6UWQ5 148 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 DPH3P1Q9H4G8 78 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 MANBALQ9NQG1 85 aa3.97□□□□□ -1.77
PRPF40A-210ENST00000489741 PHOX2AO14813 284 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 NDUFS6O75380 124 aaKnown RBP3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 RPS10P46783 165 aaKnown RBP3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 COX6A2Q02221 97 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 COTL1Q14019 142 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 RGS21Q2M5E4 152 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 KIAA1644Q3SXP7 199 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 CFAP161Q6P656 301 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 GATD1Q8NB37 220 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 DPH3Q96FX2 82 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 TPPP3Q9BW30 176 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 GNG13Q9P2W3 67 aa3.96□□□□□ -1.78
PRPF40A-210ENST00000489741 GVQW2A0A096LPI5 108 aaPredicted RBP3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 XKRY2A2RUG3 117 aa3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 NCR2O95944 276 aa3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 IFNA1P01562 189 aa3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 TRGC1P0CF51 173 aa3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 CTRLP40313 264 aa3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 EIF5AP63241 154 aaKnown RBP3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 SRSF9Q13242 221 aaKnown RBP eCLIP3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 NDUFA5Q16718 116 aa3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 CHCHD10Q8WYQ3 142 aaPredicted RBP3.95□□□□□ -1.78
PRPF40A-210ENST00000489741 A0A0J9YXV3 536 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 KANTRA0A1W2PQU2 76 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 FAM231BA6NCW3 169 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 H7C423 109 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 UBE2L6O14933 153 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 PDE6DO43924 150 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 GNG4P50150 75 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 SULT1A2P50226 295 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 FOXA3P55318 350 aaPredicted RBP3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 PRR3P79522 188 aaKnown RBP3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 MEF2BQ02080 365 aaPredicted RBP3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 HIGD2BQ4VC39 106 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 C7orf33Q8WU49 177 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 BIN3Q9NQY0 253 aa3.94□□□□□ -1.78
PRPF40A-210ENST00000489741 A0A096LNI7 61 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 TRAV26-2A0A0B4J265 109 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 TRBV6-5A0A0K0K1A5 114 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 A0A1B0GVG6 124 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 K7EN84 100 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 ESDP10768 282 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 CTAG1AP78358 180 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 MAJINQ3KP22 176 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 OCC1Q8TAD7 63 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 GTSF1Q8WW33 167 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 RPL39LQ96EH5 51 aaKnown RBP3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 OPRPNQ99935 248 aaPredicted RBP3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 MED9Q9NWA0 146 aa3.93□□□□□ -1.78
PRPF40A-210ENST00000489741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 IGKV2-24A0A0C4DH68 120 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 LINC00959A0A1B0GUT2 108 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 IGKV2-29A2NJV5 120 aaPredicted RBP3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 BCL2P10415 239 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 FGF6P10767 208 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 ZNF25P17030 456 aaPredicted RBP3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 CAMPP49913 170 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 TEX261Q6UWH6 196 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 SPINK6Q6UWN8 80 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 SLC7A5P1Q8MH63 180 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 OR5A1Q8NGJ0 315 aa3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 RNASE7Q9H1E1 156 aaKnown RBP3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 RPP21Q9H633 154 aaKnown RBP3.92□□□□□ -1.78
PRPF40A-210ENST00000489741 LINC00474Q9P2X8 69 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms