RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 RAB5AP20339 215 aa9.55□□□□□ -0.88
HLA-F-229ENST00000489502 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
HLA-F-229ENST00000489502 Q6ZUT4 128 aa9.55□□□□□ -0.88
HLA-F-229ENST00000489502 Q8N8P6 123 aa9.55□□□□□ -0.88
HLA-F-229ENST00000489502 BAALCQ8WXS3 180 aa9.55□□□□□ -0.88
HLA-F-229ENST00000489502 ALKBH7Q9BT30 221 aaPredicted RBP9.55□□□□□ -0.88
HLA-F-229ENST00000489502 SMCO4Q9NRQ5 59 aa9.55□□□□□ -0.88
HLA-F-229ENST00000489502 UBE2D4Q9Y2X8 147 aa9.55□□□□□ -0.88
HLA-F-229ENST00000489502 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
HLA-F-229ENST00000489502 COX11Q9Y6N1 276 aa9.55□□□□□ -0.88
HLA-F-229ENST00000489502 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
HLA-F-229ENST00000489502 EREGO14944 169 aa9.54□□□□□ -0.88
HLA-F-229ENST00000489502 IFI27P40305 119 aaPredicted RBP9.54□□□□□ -0.88
HLA-F-229ENST00000489502 DGAT2L7PQ6IED9 249 aa9.53□□□□□ -0.88
HLA-F-229ENST00000489502 KRTAP26-1Q6PEX3 210 aa9.53□□□□□ -0.88
HLA-F-229ENST00000489502 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
HLA-F-229ENST00000489502 TMEM18Q96B42 140 aa9.52□□□□□ -0.89
HLA-F-229ENST00000489502 CDC42SE2Q9NRR3 84 aa9.52□□□□□ -0.89
HLA-F-229ENST00000489502 C16orf90A8MZG2 172 aa9.51□□□□□ -0.89
HLA-F-229ENST00000489502 SCO1O75880 301 aa9.51□□□□□ -0.89
HLA-F-229ENST00000489502 ZNF664Q8N3J9 261 aa9.51□□□□□ -0.89
HLA-F-229ENST00000489502 Q8N814 137 aa9.51□□□□□ -0.89
HLA-F-229ENST00000489502 OPRPNQ99935 248 aaPredicted RBP9.51□□□□□ -0.89
HLA-F-229ENST00000489502 TIMM21Q9BVV7 248 aa9.51□□□□□ -0.89
HLA-F-229ENST00000489502 TRAV8-4A0A0B4J246 113 aa9.5□□□□□ -0.89
HLA-F-229ENST00000489502 SMAGPQ0VAQ4 97 aa9.5□□□□□ -0.89
HLA-F-229ENST00000489502 CHCHD10Q8WYQ3 142 aaPredicted RBP9.5□□□□□ -0.89
HLA-F-229ENST00000489502 SPANXA1Q9NS26 97 aa9.5□□□□□ -0.89
HLA-F-229ENST00000489502 DNAH5Q8TE73 4624 aa9.49□□□□□ -0.89
HLA-F-229ENST00000489502 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
HLA-F-229ENST00000489502 GAGE12HA6NDE8 117 aa9.49□□□□□ -0.89
HLA-F-229ENST00000489502 ORMDL2Q53FV1 153 aa9.49□□□□□ -0.89
HLA-F-229ENST00000489502 C2orf66Q6UXQ4 117 aa9.49□□□□□ -0.89
HLA-F-229ENST00000489502 PRSS3P2Q8NHM4 247 aa9.49□□□□□ -0.89
HLA-F-229ENST00000489502 FAM104AQ969W3 186 aa9.49□□□□□ -0.89
HLA-F-229ENST00000489502 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
HLA-F-229ENST00000489502 LINC00959A0A1B0GUT2 108 aa9.48□□□□□ -0.89
HLA-F-229ENST00000489502 USP17L23D6RBM5 183 aa9.48□□□□□ -0.89
HLA-F-229ENST00000489502 XCL1P47992 114 aa9.48□□□□□ -0.89
HLA-F-229ENST00000489502 C18orf32Q8TCD1 76 aa9.48□□□□□ -0.89
HLA-F-229ENST00000489502 CYSLTR1Q9Y271 337 aa9.48□□□□□ -0.89
HLA-F-229ENST00000489502 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
HLA-F-229ENST00000489502 K7EMI3 77 aa9.47□□□□□ -0.89
HLA-F-229ENST00000489502 CCL25O15444 150 aa9.47□□□□□ -0.89
HLA-F-229ENST00000489502 FA2HQ7L5A8 372 aa9.47□□□□□ -0.89
HLA-F-229ENST00000489502 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.89
HLA-F-229ENST00000489502 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.9
HLA-F-229ENST00000489502 IGLV5-52A0A0A0MRZ9 124 aa9.46□□□□□ -0.9
HLA-F-229ENST00000489502 MRPS36P82909 103 aaKnown RBP9.46□□□□□ -0.9
HLA-F-229ENST00000489502 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
HLA-F-229ENST00000489502 FOXI1Q12951 378 aa9.45□□□□□ -0.9
HLA-F-229ENST00000489502 SS18Q15532 418 aa9.45□□□□□ -0.9
HLA-F-229ENST00000489502 CDPF1Q6NVV7 123 aa9.45□□□□□ -0.9
HLA-F-229ENST00000489502 URB1-AS1Q96HZ7 61 aa9.45□□□□□ -0.9
HLA-F-229ENST00000489502 LINC01546A6NGU7 62 aa9.44□□□□□ -0.9
HLA-F-229ENST00000489502 COLCA2A8K830 154 aa9.44□□□□□ -0.9
HLA-F-229ENST00000489502 TRGC2P03986 189 aa9.44□□□□□ -0.9
HLA-F-229ENST00000489502 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
HLA-F-229ENST00000489502 NTN5Q8WTR8 489 aaPredicted RBP9.44□□□□□ -0.9
HLA-F-229ENST00000489502 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
HLA-F-229ENST00000489502 PYGO1Q9Y3Y4 419 aa9.44□□□□□ -0.9
HLA-F-229ENST00000489502 PRSS1P07477 247 aa9.43□□□□□ -0.9
HLA-F-229ENST00000489502 C14orf177Q52M58 125 aa9.43□□□□□ -0.9
HLA-F-229ENST00000489502 C15orf56Q8N910 161 aa9.43□□□□□ -0.9
HLA-F-229ENST00000489502 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
HLA-F-229ENST00000489502 TMEM141Q96I45 108 aa9.43□□□□□ -0.9
HLA-F-229ENST00000489502 IGIPA6NJ69 53 aa9.42□□□□□ -0.9
HLA-F-229ENST00000489502 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
HLA-F-229ENST00000489502 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
HLA-F-229ENST00000489502 LINC00173Q6ZV60 143 aa9.42□□□□□ -0.9
HLA-F-229ENST00000489502 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
HLA-F-229ENST00000489502 hDV102S1A0JD36 115 aa9.41□□□□□ -0.9
HLA-F-229ENST00000489502 C1orf196B1AJZ1 125 aa9.41□□□□□ -0.9
HLA-F-229ENST00000489502 ATP6V1G1O75348 118 aa9.41□□□□□ -0.9
HLA-F-229ENST00000489502 PMCHL1Q16048 86 aa9.41□□□□□ -0.9
HLA-F-229ENST00000489502 HIGD2BQ4VC39 106 aa9.41□□□□□ -0.9
HLA-F-229ENST00000489502 CD164L2Q6UWJ8 174 aa9.41□□□□□ -0.9
HLA-F-229ENST00000489502 KIAA1109Q2LD37 5005 aa9.4□□□□□ -0.9
HLA-F-229ENST00000489502 A0A096LNJ9 63 aa9.4□□□□□ -0.9
HLA-F-229ENST00000489502 GCSHP23434 173 aa9.4□□□□□ -0.9
HLA-F-229ENST00000489502 Q6ZN92 141 aa9.4□□□□□ -0.9
HLA-F-229ENST00000489502 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
HLA-F-229ENST00000489502 SCGB3A1Q96QR1 104 aa9.4□□□□□ -0.9
HLA-F-229ENST00000489502 TIMM17AQ99595 171 aa9.4□□□□□ -0.9
HLA-F-229ENST00000489502 LINC00614P0C842 121 aa9.39□□□□□ -0.91
HLA-F-229ENST00000489502 G0S2P27469 103 aa9.39□□□□□ -0.91
HLA-F-229ENST00000489502 C2orf88Q9BSF0 95 aa9.39□□□□□ -0.91
HLA-F-229ENST00000489502 APOBP04114 4563 aaKnown RBP9.38□□□□□ -0.91
HLA-F-229ENST00000489502 COX7A2LO14548 114 aa9.38□□□□□ -0.91
HLA-F-229ENST00000489502 ERASQ7Z444 233 aa9.38□□□□□ -0.91
HLA-F-229ENST00000489502 C5orf38Q86SI9 138 aa9.38□□□□□ -0.91
HLA-F-229ENST00000489502 AMELXQ99217 191 aa9.38□□□□□ -0.91
HLA-F-229ENST00000489502 GVQW2A0A096LPI5 108 aaPredicted RBP9.37□□□□□ -0.91
HLA-F-229ENST00000489502 HBDP02042 147 aa9.37□□□□□ -0.91
HLA-F-229ENST00000489502 NPSP0C0P6 89 aa9.37□□□□□ -0.91
HLA-F-229ENST00000489502 UBE2D1P51668 147 aa9.37□□□□□ -0.91
HLA-F-229ENST00000489502 RAB5BP61020 215 aa9.37□□□□□ -0.91
HLA-F-229ENST00000489502 LINC00526Q96FQ7 95 aa9.37□□□□□ -0.91
HLA-F-229ENST00000489502 VCX2Q9H322 139 aa9.37□□□□□ -0.91
HLA-F-229ENST00000489502 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms