RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 PRO1933Q9H354 126 aa18.65■□□□□ 0.58
HOXB3-210ENST00000489475 TSTD3H0UI37 97 aa18.65■□□□□ 0.58
HOXB3-210ENST00000489475 MRPL52Q86TS9 123 aaKnown RBP18.65■□□□□ 0.58
HOXB3-210ENST00000489475 H3BNG1 76 aa18.64■□□□□ 0.57
HOXB3-210ENST00000489475 DEFB131BA0A096LNP1 70 aa18.63■□□□□ 0.57
HOXB3-210ENST00000489475 AMMECR1LQ6DCA0 310 aa18.63■□□□□ 0.57
HOXB3-210ENST00000489475 FAM104AQ969W3 186 aa18.63■□□□□ 0.57
HOXB3-210ENST00000489475 CHCHD5Q9BSY4 110 aa18.63■□□□□ 0.57
HOXB3-210ENST00000489475 CSDC2Q9Y534 153 aaKnown RBP18.63■□□□□ 0.57
HOXB3-210ENST00000489475 MRPS36P82909 103 aaKnown RBP18.63■□□□□ 0.57
HOXB3-210ENST00000489475 Q6ZUT4 128 aa18.61■□□□□ 0.57
HOXB3-210ENST00000489475 AMELXQ99217 191 aa18.61■□□□□ 0.57
HOXB3-210ENST00000489475 LINC00469Q8N7U9 141 aa18.6■□□□□ 0.57
HOXB3-210ENST00000489475 GAGE6Q13070 117 aa18.6■□□□□ 0.57
HOXB3-210ENST00000489475 RNASE13Q5GAN3 156 aaKnown RBP18.6■□□□□ 0.57
HOXB3-210ENST00000489475 OR5A1Q8NGJ0 315 aa18.6■□□□□ 0.57
HOXB3-210ENST00000489475 TMEM101Q96IK0 257 aa18.6■□□□□ 0.57
HOXB3-210ENST00000489475 STPG4Q8N801 248 aa18.58■□□□□ 0.57
HOXB3-210ENST00000489475 ZNF25P17030 456 aaPredicted RBP18.58■□□□□ 0.56
HOXB3-210ENST00000489475 C2orf88Q9BSF0 95 aa18.58■□□□□ 0.56
HOXB3-210ENST00000489475 IGLV4-69A0A075B6H9 119 aa18.57■□□□□ 0.56
HOXB3-210ENST00000489475 TRAV10A0A0B4J240 114 aa18.57■□□□□ 0.56
HOXB3-210ENST00000489475 DEFA6Q01524 100 aa18.56■□□□□ 0.56
HOXB3-210ENST00000489475 HUWE1Q7Z6Z7 4374 aaKnown RBP18.56■□□□□ 0.56
HOXB3-210ENST00000489475 NHLRC4P0CG21 123 aaPredicted RBP18.56■□□□□ 0.56
HOXB3-210ENST00000489475 CDC42SE2Q9NRR3 84 aa18.54■□□□□ 0.56
HOXB3-210ENST00000489475 C11orf86A6NJI1 115 aa18.53■□□□□ 0.56
HOXB3-210ENST00000489475 ANKRD39Q53RE8 183 aa18.53■□□□□ 0.56
HOXB3-210ENST00000489475 TMEM262E9PQX1 116 aa18.52■□□□□ 0.56
HOXB3-210ENST00000489475 NFE4Q86UQ8 179 aa18.52■□□□□ 0.56
HOXB3-210ENST00000489475 IGLC3P0DOY3 106 aa18.51■□□□□ 0.55
HOXB3-210ENST00000489475 LELP1Q5T871 98 aa18.51■□□□□ 0.55
HOXB3-210ENST00000489475 CHAC1Q9BUX1 264 aa18.51■□□□□ 0.55
HOXB3-210ENST00000489475 A0A0J9YXV3 536 aa18.51■□□□□ 0.55
HOXB3-210ENST00000489475 C14orf144Q96I85 54 aa18.51■□□□□ 0.55
HOXB3-210ENST00000489475 TCTAP57738 103 aa18.5■□□□□ 0.55
HOXB3-210ENST00000489475 LYPD5Q6UWN5 251 aa18.49■□□□□ 0.55
HOXB3-210ENST00000489475 COL7A1Q02388 2944 aa18.49■□□□□ 0.55
HOXB3-210ENST00000489475 TIRAPP58753 221 aa18.49■□□□□ 0.55
HOXB3-210ENST00000489475 MIEN1Q9BRT3 115 aa18.49■□□□□ 0.55
HOXB3-210ENST00000489475 IGLV4-60A0A075B6I1 120 aa18.48■□□□□ 0.55
HOXB3-210ENST00000489475 UBE2D1P51668 147 aa18.48■□□□□ 0.55
HOXB3-210ENST00000489475 TMEM170BQ5T4T1 132 aa18.48■□□□□ 0.55
HOXB3-210ENST00000489475 A0A1B0GUV1 79 aa18.47■□□□□ 0.55
HOXB3-210ENST00000489475 DDTP30046 118 aa18.47■□□□□ 0.55
HOXB3-210ENST00000489475 UQCR10Q9UDW1 63 aa18.47■□□□□ 0.55
HOXB3-210ENST00000489475 RBX1P62877 108 aa18.46■□□□□ 0.55
HOXB3-210ENST00000489475 MPV17L2Q567V2 206 aa18.46■□□□□ 0.55
HOXB3-210ENST00000489475 DNAH9Q9NYC9 4486 aa18.46■□□□□ 0.55
HOXB3-210ENST00000489475 TINCRA0A1B0GVN0 87 aa18.45■□□□□ 0.54
HOXB3-210ENST00000489475 NMUP48645 174 aa18.45■□□□□ 0.54
HOXB3-210ENST00000489475 MEGF8Q7Z7M0 2845 aa18.45■□□□□ 0.54
HOXB3-210ENST00000489475 STAB2Q8WWQ8 2551 aa18.44■□□□□ 0.54
HOXB3-210ENST00000489475 TRAV13-1A0A0B4J241 112 aa18.44■□□□□ 0.54
HOXB3-210ENST00000489475 C15orf53Q8NAA6 179 aa18.44■□□□□ 0.54
HOXB3-210ENST00000489475 HERVK_113P61574 105 aa18.44■□□□□ 0.54
HOXB3-210ENST00000489475 GEMIN7Q9H840 131 aaKnown RBP18.44■□□□□ 0.54
HOXB3-210ENST00000489475 TRAV8-6A0A0B4J262 113 aa18.42■□□□□ 0.54
HOXB3-210ENST00000489475 COX8AP10176 69 aa18.42■□□□□ 0.54
HOXB3-210ENST00000489475 ZNF22P17026 224 aaPredicted RBP18.42■□□□□ 0.54
HOXB3-210ENST00000489475 SEC11AP67812 179 aa18.42■□□□□ 0.54
HOXB3-210ENST00000489475 SLC25A34Q6PIV7 304 aa18.42■□□□□ 0.54
HOXB3-210ENST00000489475 IGKV2D-26A0A0A0MRZ7 120 aa18.42■□□□□ 0.54
HOXB3-210ENST00000489475 E9PLD3 99 aa18.39■□□□□ 0.54
HOXB3-210ENST00000489475 LINC00242Q5T6M2 205 aa18.39■□□□□ 0.54
HOXB3-210ENST00000489475 FAM19A3Q7Z5A8 133 aa18.39■□□□□ 0.54
HOXB3-210ENST00000489475 HERVK_113P63121 156 aa18.39■□□□□ 0.53
HOXB3-210ENST00000489475 ESRGQ1W209 222 aa18.39■□□□□ 0.53
HOXB3-210ENST00000489475 IGKV3OR2-268A0A0C4DH90 116 aa18.38■□□□□ 0.53
HOXB3-210ENST00000489475 PCP2Q8IVA1 136 aa18.37■□□□□ 0.53
HOXB3-210ENST00000489475 TMEM223A0PJW6 202 aa18.37■□□□□ 0.53
HOXB3-210ENST00000489475 IGLL5B9A064 214 aa18.37■□□□□ 0.53
HOXB3-210ENST00000489475 LINC00587B1AMM8 73 aa18.35■□□□□ 0.53
HOXB3-210ENST00000489475 ANGP03950 147 aaKnown RBP18.35■□□□□ 0.53
HOXB3-210ENST00000489475 Q8N3U1 123 aa18.35■□□□□ 0.53
HOXB3-210ENST00000489475 HNRNPA3P51991 378 aaKnown RBP18.35■□□□□ 0.53
HOXB3-210ENST00000489475 COX6A2Q02221 97 aa18.35■□□□□ 0.53
HOXB3-210ENST00000489475 BOD1L2Q8IYS8 172 aa18.35■□□□□ 0.53
HOXB3-210ENST00000489475 TP73-AS1Q9UF72 201 aa18.35■□□□□ 0.53
HOXB3-210ENST00000489475 IGLV5-45A0A087WSX0 123 aa18.34■□□□□ 0.53
HOXB3-210ENST00000489475 H3BRM9 83 aa18.33■□□□□ 0.53
HOXB3-210ENST00000489475 LINC00269Q8N2A0 174 aa18.33■□□□□ 0.53
HOXB3-210ENST00000489475 CDKN2A-AS1Q9UH64 79 aa18.33■□□□□ 0.53
HOXB3-210ENST00000489475 DLEU1O43261 78 aa18.33■□□□□ 0.52
HOXB3-210ENST00000489475 LINC00959A0A1B0GUT2 108 aa18.32■□□□□ 0.52
HOXB3-210ENST00000489475 WFDC10BQ8IUB3 73 aa18.32■□□□□ 0.52
HOXB3-210ENST00000489475 TTTY13Q9BZ97 58 aa18.32■□□□□ 0.52
HOXB3-210ENST00000489475 CLPSL2Q6UWE3 100 aa18.31■□□□□ 0.52
HOXB3-210ENST00000489475 SS18Q15532 418 aa18.3■□□□□ 0.52
HOXB3-210ENST00000489475 IGHV3-64A0A075B6Q5 118 aa18.29■□□□□ 0.52
HOXB3-210ENST00000489475 PRKDCP78527 4128 aaKnown RBP18.29■□□□□ 0.52
HOXB3-210ENST00000489475 LEPROTO15243 131 aa18.28■□□□□ 0.52
HOXB3-210ENST00000489475 REG3AQ06141 175 aa18.28■□□□□ 0.52
HOXB3-210ENST00000489475 CCL25O15444 150 aa18.28■□□□□ 0.52
HOXB3-210ENST00000489475 SPINK8P0C7L1 97 aa18.28■□□□□ 0.52
HOXB3-210ENST00000489475 IGHV3-30P01768 117 aa18.27■□□□□ 0.52
HOXB3-210ENST00000489475 IGHV3-33P01772 117 aa18.27■□□□□ 0.52
HOXB3-210ENST00000489475 IGHV3-30-3P0DP02 117 aa18.27■□□□□ 0.52
HOXB3-210ENST00000489475 IGHV3-30-5P0DP03 117 aa18.27■□□□□ 0.52
HOXB3-210ENST00000489475 MAPKAPK5-AS1Q8N8E1 139 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms