RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 OVOL2Q9BRP0 275 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 AGRNO00468 2067 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 ZNF815PA8K554 130 aa6.07□□□□□ -1.44
VTI1A-207ENST00000489357 H7C423 109 aa6.07□□□□□ -1.44
VTI1A-207ENST00000489357 MAPKAPK5-AS1Q8N8E1 139 aa6.07□□□□□ -1.44
VTI1A-207ENST00000489357 MRPL16Q9NX20 251 aaKnown RBP6.07□□□□□ -1.44
VTI1A-207ENST00000489357 TINCRA0A1B0GVN0 87 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 TRBV6-4A0A1B0GX49 114 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 TMEM223A0PJW6 202 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 SMIM9A6NGZ8 99 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 J3QQQ9 107 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 K7EP13 123 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 K7EQD1 137 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 LEPROTO15243 131 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 CCL25O15444 150 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 RRN3P1Q2M238 152 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 TMEM170BQ5T4T1 132 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 C9orf66Q5T8R8 295 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 SCGB1D4Q6XE38 83 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 FAM19A3Q7Z5A8 133 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 CSNK1G2-AS1Q8NCQ2 148 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 CHCHD7Q9BUK0 85 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 GTSF1LQ9H1H1 148 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 UBE2D4Q9Y2X8 147 aa6.06□□□□□ -1.44
VTI1A-207ENST00000489357 TRGV1A0A0A0MS02 117 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 A0A1W2PPM0 123 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 GAGE10A6NGK3 116 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 K7EP34 96 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 GIG44P09565 113 aaPredicted RBP6.05□□□□□ -1.44
VTI1A-207ENST00000489357 FABP2P12104 132 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 LGALS3P17931 250 aaKnown RBP6.05□□□□□ -1.44
VTI1A-207ENST00000489357 FXYD2P54710 66 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 AMMECR1LQ6DCA0 310 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 ZNRF2Q8NHG8 242 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 PHLDA1Q8WV24 401 aaPredicted RBP6.05□□□□□ -1.44
VTI1A-207ENST00000489357 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
VTI1A-207ENST00000489357 NACAE9PAV3 2078 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 IGLV5-45A0A087WSX0 123 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 G3V4G9 280 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 ZNF22P17026 224 aaPredicted RBP6.04□□□□□ -1.44
VTI1A-207ENST00000489357 TCTAP57738 103 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 TIRAPP58753 221 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 EGFEM1PQ0D2K5 195 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 Q6ZVH6 145 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 SLC25A29Q8N8R3 303 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 KIR2DL5BQ8NHK3 375 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
VTI1A-207ENST00000489357 IGHV3-73A0A0B4J1V6 119 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 A0A0J9YY99 117 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 PLAC8L1A1L4L8 177 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 TMEM238C9JI98 176 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 H3BUT2 72 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 UBE2D3P61077 147 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 UBE2D2P62837 147 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 SRSF9Q13242 221 aaKnown RBP eCLIP6.03□□□□□ -1.44
VTI1A-207ENST00000489357 RNF151Q2KHN1 245 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 C12orf74Q32Q52 190 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 LYRM7Q5U5X0 104 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 Q6ZSN1 163 aa6.03□□□□□ -1.44
VTI1A-207ENST00000489357 NHP2Q9NX24 153 aaKnown RBP6.03□□□□□ -1.44
VTI1A-207ENST00000489357 IGHV3OR16-12A0A075B7B8 117 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 IGHV1-58A0A0C4DH39 117 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 UBE2D1P51668 147 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 HERVK_113P63121 156 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 DGAT2L7PQ6IED9 249 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 Q6ZTI0 123 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 LINC00612Q8N6U2 182 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 FAM104AQ969W3 186 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 RNF183Q96D59 192 aa6.02□□□□□ -1.45
VTI1A-207ENST00000489357 PRKDCP78527 4128 aaKnown RBP6.01□□□□□ -1.45
VTI1A-207ENST00000489357 TRGV2A0A075B6R0 118 aa6.01□□□□□ -1.45
VTI1A-207ENST00000489357 A0A0J9YXV3 536 aa6.01□□□□□ -1.45
VTI1A-207ENST00000489357 GAGE12BA1L429 117 aa6.01□□□□□ -1.45
VTI1A-207ENST00000489357 TIMM17BO60830 172 aa6.01□□□□□ -1.45
VTI1A-207ENST00000489357 SBSPONQ8IVN8 264 aa6.01□□□□□ -1.45
VTI1A-207ENST00000489357 ZNF479Q96JC4 524 aa6.01□□□□□ -1.45
VTI1A-207ENST00000489357 PPDPFQ9H3Y8 114 aa6.01□□□□□ -1.45
VTI1A-207ENST00000489357 GEMIN7Q9H840 131 aaKnown RBP6.01□□□□□ -1.45
VTI1A-207ENST00000489357 NOP10Q9NPE3 64 aaKnown RBP6.01□□□□□ -1.45
VTI1A-207ENST00000489357 SPCS1Q9Y6A9 102 aa6.01□□□□□ -1.45
VTI1A-207ENST00000489357 A0A0J9YXY3 114 aa6□□□□□ -1.45
VTI1A-207ENST00000489357 IGLL5B9A064 214 aa6□□□□□ -1.45
VTI1A-207ENST00000489357 PRB2P02812 416 aaPredicted RBP6□□□□□ -1.45
VTI1A-207ENST00000489357 PRM2P04554 102 aa6□□□□□ -1.45
VTI1A-207ENST00000489357 IGHV3-30-3P0DP02 117 aa6□□□□□ -1.45
VTI1A-207ENST00000489357 RPL35AP18077 110 aaKnown RBP6□□□□□ -1.45
VTI1A-207ENST00000489357 APOC4P55056 127 aa6□□□□□ -1.45
VTI1A-207ENST00000489357 KRTAP10-11P60412 298 aa6□□□□□ -1.45
VTI1A-207ENST00000489357 RPL24P83731 157 aaKnown RBP6□□□□□ -1.45
VTI1A-207ENST00000489357 COPS9Q8WXC6 57 aa6□□□□□ -1.45
VTI1A-207ENST00000489357 VSIG2Q96IQ7 327 aa6□□□□□ -1.45
VTI1A-207ENST00000489357 OPRPNQ99935 248 aaPredicted RBP6□□□□□ -1.45
VTI1A-207ENST00000489357 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.99□□□□□ -1.45
VTI1A-207ENST00000489357 LYRM9A8MSI8 78 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 F8W1H4 67 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 IGHV3-30P01768 117 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 LINC00694P0DN24 101 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 IGHV3-30-5P0DP03 117 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 EMP1P54849 157 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms